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The map label for this gene is 45658773

Identifier: 45658773

GI number: 45658773

Start: 3575772

End: 3576539

Strand: Direct

Name: 45658773

Synonym: LIC12945

Alternate gene names: NA

Gene position: 3575772-3576539 (Clockwise)

Preceding gene: 45658766

Following gene: 45658774

Centisome position: 83.6

GC content: 36.72

Gene sequence:

>768_bases
TTGAAAGGGTCTTTCTTTTTTCCCTTTCTCAAAATGACTCTCTTGACAAACAAAACAGATTCCACAATGTTCATGGAGAT
GGGGCAGGAAATCCGAGAAATATCCGACAATATCCGCCTAACAATCGAGAACGGAAAAATCCTGTCTTTAAAGACTCACA
GGATAACTCATTCCGTCGAAGAACATATCCAAAAGGCAGTCGGACTGATTCTGGATAAGATGACTCATCCAACTTTGATT
CCTACGGTTTATACGATAATAAAAGAGTTGGCAATCAACGCTTGCAAAGCAAATCAAAAAAGGATTTTTTTTGAAGAAAA
AGGTCTGGATCTAAACAATCCTTCCGATTACGAAAAAGGAGTTAGAGAGTATAAAAGTCTTTTTAGCGAAAAGATGTCTG
AACTTTACGGACAAAAAGCTCAAAAAAAGGGATATTATTGTTTGATCAGCTTTCACTATTCCTTAAACGGAATTAGAATC
GAAGTAACCAATAACGCACCGATTACACAACAAGAGGAAAAATCTCTCCGCGAAAAACTGGAAAAAGGTATGCGTTATAA
TGACATCGCGCAATTTTATTTGGACAATGCGGATAACACGGAAGGTGCAGGAATTGGATTAGCTCTCATTCTAATTATGC
TTAAAGGAGAAGGGATCGATCCATCTTACTTCAGAATCATCATCAGAGAAGATGTTACAATCGCAAGATTAGAAATTCCT
CTCACTCCTGACTTTCAAAGTCTTAGAAAACAAGATCAAAAAAATTAA

Upstream 100 bases:

>100_bases
ATTTAAAATAATAGATTCTGAAGAAATAGATGATGCGATCAAAAGTAAGAACGTAAATAAAGAAACGACACGTTTTAAAT
AAATACAGATTTGTTGTAAC

Downstream 100 bases:

>100_bases
ATGCGACTTCCTCTTTCCGTTTGTATCATCACTCTCAACGAAGAAGACAACCTAGAACGTTGTCTGAAACCTTTGGACTT
TGCTTCCGAAATTATAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKGSFFFPFLKMTLLTNKTDSTMFMEMGQEIREISDNIRLTIENGKILSLKTHRITHSVEEHIQKAVGLILDKMTHPTLI
PTVYTIIKELAINACKANQKRIFFEEKGLDLNNPSDYEKGVREYKSLFSEKMSELYGQKAQKKGYYCLISFHYSLNGIRI
EVTNNAPITQQEEKSLREKLEKGMRYNDIAQFYLDNADNTEGAGIGLALILIMLKGEGIDPSYFRIIIREDVTIARLEIP
LTPDFQSLRKQDQKN

Sequences:

>Translated_255_residues
MKGSFFFPFLKMTLLTNKTDSTMFMEMGQEIREISDNIRLTIENGKILSLKTHRITHSVEEHIQKAVGLILDKMTHPTLI
PTVYTIIKELAINACKANQKRIFFEEKGLDLNNPSDYEKGVREYKSLFSEKMSELYGQKAQKKGYYCLISFHYSLNGIRI
EVTNNAPITQQEEKSLREKLEKGMRYNDIAQFYLDNADNTEGAGIGLALILIMLKGEGIDPSYFRIIIREDVTIARLEIP
LTPDFQSLRKQDQKN
>Mature_255_residues
MKGSFFFPFLKMTLLTNKTDSTMFMEMGQEIREISDNIRLTIENGKILSLKTHRITHSVEEHIQKAVGLILDKMTHPTLI
PTVYTIIKELAINACKANQKRIFFEEKGLDLNNPSDYEKGVREYKSLFSEKMSELYGQKAQKKGYYCLISFHYSLNGIRI
EVTNNAPITQQEEKSLREKLEKGMRYNDIAQFYLDNADNTEGAGIGLALILIMLKGEGIDPSYFRIIIREDVTIARLEIP
LTPDFQSLRKQDQKN

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 29383; Mature: 29383

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSFFFPFLKMTLLTNKTDSTMFMEMGQEIREISDNIRLTIENGKILSLKTHRITHSVE
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEEHHHHHHHHH
EHIQKAVGLILDKMTHPTLIPTVYTIIKELAINACKANQKRIFFEEKGLDLNNPSDYEKG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHH
VREYKSLFSEKMSELYGQKAQKKGYYCLISFHYSLNGIRIEVTNNAPITQQEEKSLREKL
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHH
EKGMRYNDIAQFYLDNADNTEGAGIGLALILIMLKGEGIDPSYFRIIIREDVTIARLEIP
HHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEEEEEECCCEEEEEEEC
LTPDFQSLRKQDQKN
CCCCHHHHHHHHCCC
>Mature Secondary Structure
MKGSFFFPFLKMTLLTNKTDSTMFMEMGQEIREISDNIRLTIENGKILSLKTHRITHSVE
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEEHHHHHHHHH
EHIQKAVGLILDKMTHPTLIPTVYTIIKELAINACKANQKRIFFEEKGLDLNNPSDYEKG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHH
VREYKSLFSEKMSELYGQKAQKKGYYCLISFHYSLNGIRIEVTNNAPITQQEEKSLREKL
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHH
EKGMRYNDIAQFYLDNADNTEGAGIGLALILIMLKGEGIDPSYFRIIIREDVTIARLEIP
HHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEEEEEECCCEEEEEEEC
LTPDFQSLRKQDQKN
CCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]