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The map label for this gene is 45658761

Identifier: 45658761

GI number: 45658761

Start: 3565060

End: 3565347

Strand: Reverse

Name: 45658761

Synonym: LIC12933

Alternate gene names: NA

Gene position: 3565347-3565060 (Counterclockwise)

Preceding gene: 45658762

Following gene: 45658760

Centisome position: 83.36

GC content: 36.11

Gene sequence:

>288_bases
ATGGAACCAGAAGATTCTATAGTTTGGATCAGCGAAGAAGAACTCGCAAAACAAAGAAGAATTGCAAAAGATCTTCGCAA
GACTTCTTGGTGGAAAAAGAAAAAAAGTTCTGGTCTTTGCCATTACTGTGGTAAAAAATTTCTCCCGGAAGAGTTGACGA
TGGATCATCTCATTCCTATTGCAAAAGGAGGAAAGTCTATCAAAGCAAATCTAGTTCCTGCATGCAAAGAATGTAATTCA
GCAAAAAAGAATAAACTTCCGTTTGAATTCGATTCAGAGACTAAATAA

Upstream 100 bases:

>100_bases
GGAAGAAGGTATTTTTGCGGTTAATCGAAATGATCTGGCAAAGTTATCCGTGTCCGGACCTGGTTCCGATTGGATTATTT
ATAAAGATTAGAATTTTTAA

Downstream 100 bases:

>100_bases
AGTGAGTTAGTTGATAAGAGCTTGTTCCAAAATTTGTCGGAATTACGACAAATCCTCTGTAAAACTTATACCTGCAACGC
GATCCGTAGAGAGCGTTGCA

Product: HNH endonuclease family protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; HNH Nuclease; Hnh Endonuclease; HNH Family Endonuclease

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MEPEDSIVWISEEELAKQRRIAKDLRKTSWWKKKKSSGLCHYCGKKFLPEELTMDHLIPIAKGGKSIKANLVPACKECNS
AKKNKLPFEFDSETK

Sequences:

>Translated_95_residues
MEPEDSIVWISEEELAKQRRIAKDLRKTSWWKKKKSSGLCHYCGKKFLPEELTMDHLIPIAKGGKSIKANLVPACKECNS
AKKNKLPFEFDSETK
>Mature_95_residues
MEPEDSIVWISEEELAKQRRIAKDLRKTSWWKKKKSSGLCHYCGKKFLPEELTMDHLIPIAKGGKSIKANLVPACKECNS
AKKNKLPFEFDSETK

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10923; Mature: 10923

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPEDSIVWISEEELAKQRRIAKDLRKTSWWKKKKSSGLCHYCGKKFLPEELTMDHLIPI
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHC
AKGGKSIKANLVPACKECNSAKKNKLPFEFDSETK
CCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPEDSIVWISEEELAKQRRIAKDLRKTSWWKKKKSSGLCHYCGKKFLPEELTMDHLIPI
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHC
AKGGKSIKANLVPACKECNSAKKNKLPFEFDSETK
CCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA