Click here to switch to the map view.

The map label for this gene is 45658736

Identifier: 45658736

GI number: 45658736

Start: 3527534

End: 3528256

Strand: Reverse

Name: 45658736

Synonym: LIC12906

Alternate gene names: NA

Gene position: 3528256-3527534 (Counterclockwise)

Preceding gene: 45658738

Following gene: 45658729

Centisome position: 82.49

GC content: 36.51

Gene sequence:

>723_bases
ATGAATTTAAAACAAGGAAATAAAATTTTGAAAACAATATTTCTAACATTGCTTATCGGATCCGTTGTATGCACTCTTTA
TTCGTGTGGGGATAAAAAAGAAGAAGATAATTCAGAACTACTTCTTTTCCTTCTCAATTCATTAGGTTCTTCCAATAATA
CTTCTACTCCCGTCGTTACTTCTTGTAAGGATGCTTCTTTTTGTAGAACTTTTATCGCTACCAATAACGGGGCGGGTTAT
AATGGAAACTTAGGTGGAATTTTTGGAGCAGACGCAAAGTGTGCCGCTGCAAAATCTTCTAGTTTAACGGGAGCTTATAA
GGCTTTGATTGTCGACGGTCCAACGGGAAGACAAGTTATTTCTGCTTTAGATGGATCAGTAGATAAAAAAGATTGGGTCC
TTTATCCAAACAAACAATACCGTAGAAGCGACGGCACTACAATTACCTTTACTACAAACGCAAATTCTATTGTTATAGAT
AATCTTCAAAATGGAATTGATTCAGGAACTCAAAAATTCTTTTGGAACGGTTTAGGAAACAACGTTGGATTTCTTTGGGA
GCCATTATCAAACTGTAATAATTGGAATTCTACGGACGGACTTATTACGGGACAGGCTGGAAATACAACCGAACTTCAAG
CAGATATAACTCCAGAAGGAGCTTTTACCGTTGATAACCATGCTTGTAATACCAATCTAAATCTTCTCTGTGTAGAACAG
TAA

Upstream 100 bases:

>100_bases
AAATACTCACCTGGATCTGTTATTTAGTTCTAAGTTCGTTTGATTTTCTTTTTAGGTTAAAAGTTTTTAAATCTAAACTC
GAAAGGATAAATGCAAACGA

Downstream 100 bases:

>100_bases
GTTTTTCAAAAACATCGCCCTTGAAAGGGCGATGTTTGATTTCTAAAGCTTATATAAATTGCAGAACTTACTTTTGAGAT
AAAAGTTCCATTTCTTTAGA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNLKQGNKILKTIFLTLLIGSVVCTLYSCGDKKEEDNSELLLFLLNSLGSSNNTSTPVVTSCKDASFCRTFIATNNGAGY
NGNLGGIFGADAKCAAAKSSSLTGAYKALIVDGPTGRQVISALDGSVDKKDWVLYPNKQYRRSDGTTITFTTNANSIVID
NLQNGIDSGTQKFFWNGLGNNVGFLWEPLSNCNNWNSTDGLITGQAGNTTELQADITPEGAFTVDNHACNTNLNLLCVEQ

Sequences:

>Translated_240_residues
MNLKQGNKILKTIFLTLLIGSVVCTLYSCGDKKEEDNSELLLFLLNSLGSSNNTSTPVVTSCKDASFCRTFIATNNGAGY
NGNLGGIFGADAKCAAAKSSSLTGAYKALIVDGPTGRQVISALDGSVDKKDWVLYPNKQYRRSDGTTITFTTNANSIVID
NLQNGIDSGTQKFFWNGLGNNVGFLWEPLSNCNNWNSTDGLITGQAGNTTELQADITPEGAFTVDNHACNTNLNLLCVEQ
>Mature_240_residues
MNLKQGNKILKTIFLTLLIGSVVCTLYSCGDKKEEDNSELLLFLLNSLGSSNNTSTPVVTSCKDASFCRTFIATNNGAGY
NGNLGGIFGADAKCAAAKSSSLTGAYKALIVDGPTGRQVISALDGSVDKKDWVLYPNKQYRRSDGTTITFTTNANSIVID
NLQNGIDSGTQKFFWNGLGNNVGFLWEPLSNCNNWNSTDGLITGQAGNTTELQADITPEGAFTVDNHACNTNLNLLCVEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25631; Mature: 25631

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKQGNKILKTIFLTLLIGSVVCTLYSCGDKKEEDNSELLLFLLNSLGSSNNTSTPVVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEE
SCKDASFCRTFIATNNGAGYNGNLGGIFGADAKCAAAKSSSLTGAYKALIVDGPTGRQVI
CCCCHHHHHHHEEECCCCCCCCCCCCEECCCCCHHHCCCCCCCCEEEEEEEECCCHHHHH
SALDGSVDKKDWVLYPNKQYRRSDGTTITFTTNANSIVIDNLQNGIDSGTQKFFWNGLGN
HHHCCCCCCCCEEECCCHHHCCCCCCEEEEEECCCEEEEECHHCCCCCCCHHEEECCCCC
NVGFLWEPLSNCNNWNSTDGLITGQAGNTTELQADITPEGAFTVDNHACNTNLNLLCVEQ
CCCEEECCHHCCCCCCCCCCEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCEEEEECC
>Mature Secondary Structure
MNLKQGNKILKTIFLTLLIGSVVCTLYSCGDKKEEDNSELLLFLLNSLGSSNNTSTPVVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEE
SCKDASFCRTFIATNNGAGYNGNLGGIFGADAKCAAAKSSSLTGAYKALIVDGPTGRQVI
CCCCHHHHHHHEEECCCCCCCCCCCCEECCCCCHHHCCCCCCCCEEEEEEEECCCHHHHH
SALDGSVDKKDWVLYPNKQYRRSDGTTITFTTNANSIVIDNLQNGIDSGTQKFFWNGLGN
HHHCCCCCCCCEEECCCHHHCCCCCCEEEEEECCCEEEEECHHCCCCCCCHHEEECCCCC
NVGFLWEPLSNCNNWNSTDGLITGQAGNTTELQADITPEGAFTVDNHACNTNLNLLCVEQ
CCCEEECCHHCCCCCCCCCCEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA