Click here to switch to the map view.

The map label for this gene is 45658718

Identifier: 45658718

GI number: 45658718

Start: 3490741

End: 3491295

Strand: Reverse

Name: 45658718

Synonym: LIC12888

Alternate gene names: NA

Gene position: 3491295-3490741 (Counterclockwise)

Preceding gene: 45658719

Following gene: 45658716

Centisome position: 81.63

GC content: 32.61

Gene sequence:

>555_bases
ATGATTGAGATACTTGAATTGCAAACCAAGCATGGAAAAATAAAAATAATAGACGATCGTAGCTTTCAAGTTGGCTCTGA
AGATAATTTACATTTATATGATTATATCTACAAAGCAAATGATGAAAATTACTATGCTTCTACACAATTCGGAATTTTTA
CATCGGATGCGCAGGCAATTTTATTAAATAACGGAGGCGCTTCCGGTTTACATGAGCATTGTTATGTAATTGATGATATT
ACATTGCTTTTATGTGTAGGTGATTCTATTTTTTGTTTAGGTATTCCATCACTTGAATTGTTGTGGATCTCTCAAGTTGA
CTCAGCATGTTGTTTCGGGATTTATAAGATTTCGGATGGGTTTATAATTCATGGAGAACTTGAAATTACTAGAATCAATA
CCAGCGGTAATATAGTTTGGCAACATTCAGGTTCCGATATATTTACTACTGCTAAAGGAGGTGATACTTTTAAAATAGAA
AATGATATTATATACGCAAAGAGTTGGGATCATCGGCGATATAAGTTTTCTCTTAGTGGCGAAGTTTTAGTATAA

Upstream 100 bases:

>100_bases
TCATTTTCTTGTTTACAGCTTCGATCATACTGTTTGAGTAAGAGATGTTTACTTGAGCGATTAGTTTTTCGAATGCTGTA
ACAATAGAGCCAGGTTAATT

Downstream 100 bases:

>100_bases
ATAAATGGTTACAGTAACAGTATTTACCTGACAGTTTTGTTCTAAAAGAAATGGATTTTATGATCTTGACAACCTTATTT
AATTAGATTTAGAAACTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIEILELQTKHGKIKIIDDRSFQVGSEDNLHLYDYIYKANDENYYASTQFGIFTSDAQAILLNNGGASGLHEHCYVIDDI
TLLLCVGDSIFCLGIPSLELLWISQVDSACCFGIYKISDGFIIHGELEITRINTSGNIVWQHSGSDIFTTAKGGDTFKIE
NDIIYAKSWDHRRYKFSLSGEVLV

Sequences:

>Translated_184_residues
MIEILELQTKHGKIKIIDDRSFQVGSEDNLHLYDYIYKANDENYYASTQFGIFTSDAQAILLNNGGASGLHEHCYVIDDI
TLLLCVGDSIFCLGIPSLELLWISQVDSACCFGIYKISDGFIIHGELEITRINTSGNIVWQHSGSDIFTTAKGGDTFKIE
NDIIYAKSWDHRRYKFSLSGEVLV
>Mature_184_residues
MIEILELQTKHGKIKIIDDRSFQVGSEDNLHLYDYIYKANDENYYASTQFGIFTSDAQAILLNNGGASGLHEHCYVIDDI
TLLLCVGDSIFCLGIPSLELLWISQVDSACCFGIYKISDGFIIHGELEITRINTSGNIVWQHSGSDIFTTAKGGDTFKIE
NDIIYAKSWDHRRYKFSLSGEVLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20670; Mature: 20670

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEILELQTKHGKIKIIDDRSFQVGSEDNLHLYDYIYKANDENYYASTQFGIFTSDAQAI
CEEEEEEECCCCEEEEEECCCEEECCCCCEEEEEEEEEECCCCEEEEEEEEEEECCCCEE
LLNNGGASGLHEHCYVIDDITLLLCVGDSIFCLGIPSLELLWISQVDSACCFGIYKISDG
EEECCCCCCCCCEEEEECCEEEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEEECCC
FIIHGELEITRINTSGNIVWQHSGSDIFTTAKGGDTFKIENDIIYAKSWDHRRYKFSLSG
EEEEEEEEEEEECCCCCEEEEECCCEEEEECCCCCEEEEECCEEEEECCCCEEEEEEECC
EVLV
EEEC
>Mature Secondary Structure
MIEILELQTKHGKIKIIDDRSFQVGSEDNLHLYDYIYKANDENYYASTQFGIFTSDAQAI
CEEEEEEECCCCEEEEEECCCEEECCCCCEEEEEEEEEECCCCEEEEEEEEEEECCCCEE
LLNNGGASGLHEHCYVIDDITLLLCVGDSIFCLGIPSLELLWISQVDSACCFGIYKISDG
EEECCCCCCCCCEEEEECCEEEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEEECCC
FIIHGELEITRINTSGNIVWQHSGSDIFTTAKGGDTFKIENDIIYAKSWDHRRYKFSLSG
EEEEEEEEEEEECCCCCEEEEECCCEEEEECCCCCEEEEECCEEEEECCCCEEEEEEECC
EVLV
EEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA