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The map label for this gene is 45658708

Identifier: 45658708

GI number: 45658708

Start: 3474482

End: 3475033

Strand: Reverse

Name: 45658708

Synonym: LIC12878

Alternate gene names: NA

Gene position: 3475033-3474482 (Counterclockwise)

Preceding gene: 45658710

Following gene: 45658707

Centisome position: 81.25

GC content: 36.78

Gene sequence:

>552_bases
ATGTCACTTCTTGAATCTGAAAAAATACCATTAGGAAGTTTACTTCCAGATTTCCGGTTGGCTGATCCAAACGGAAAAAC
ATATTCTTCCGATCAAATATCCGGTTCTACTGGATTGTTATTGATAGTTACTTGTAATCATTGTCCTTATGCACAAGCGA
TTTGGCCAAGATTGATTCGTTTTGCAGGAGAAATACTTTCTCTTGGAGTTCGAACCGTTGCAATCAATCCAAACATACAC
CCTGACTATCCGGACGATTCGCCCGAGATGATGCTTGTAAAAATTAAGGAATGGAAGATTTCCTTTCCTTATTTAGTAGA
TGAAACTCAAGAAGTTTCAAAAAAGCTAAAAGCGATGTGTACACCAGATATTTATCTATATGATGGAGAACAGAGATTAT
ATTATCATGGAAGAATGGATGATAACTGGAAGAATGAAAAACAGGTTTCTAGAAAAGAATTAGAGTATGCGGTTCATCAA
CTCGTAAAAGGAAATCCTGCTCCTATCAATCAAATGCCCTCGATGGGATGTTCTATAAAATGGAAGGAGTAG

Upstream 100 bases:

>100_bases
AATATTCGAAAGTATTTAATAGTTTTCCATAAAAAAACGGATTATTTACTGTAAAAAAAAATTTATGAAATAAACTGGAT
TTCATTTTAAGGCGAAAATC

Downstream 100 bases:

>100_bases
TCACTTGCCAGCAATAACACCCGATCACACTCCTATCAACGCGGAATCTTTTCAGGAAGTGGAAATTATCAGTAACCACT
ATAGAGAGATTGAAACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; Redoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin; Thiol-Disulfide Isomerase Or Thioredoxin; Peroxiredoxin; Thiol-Disulfide Isomerase; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSLLESEKIPLGSLLPDFRLADPNGKTYSSDQISGSTGLLLIVTCNHCPYAQAIWPRLIRFAGEILSLGVRTVAINPNIH
PDYPDDSPEMMLVKIKEWKISFPYLVDETQEVSKKLKAMCTPDIYLYDGEQRLYYHGRMDDNWKNEKQVSRKELEYAVHQ
LVKGNPAPINQMPSMGCSIKWKE

Sequences:

>Translated_183_residues
MSLLESEKIPLGSLLPDFRLADPNGKTYSSDQISGSTGLLLIVTCNHCPYAQAIWPRLIRFAGEILSLGVRTVAINPNIH
PDYPDDSPEMMLVKIKEWKISFPYLVDETQEVSKKLKAMCTPDIYLYDGEQRLYYHGRMDDNWKNEKQVSRKELEYAVHQ
LVKGNPAPINQMPSMGCSIKWKE
>Mature_182_residues
SLLESEKIPLGSLLPDFRLADPNGKTYSSDQISGSTGLLLIVTCNHCPYAQAIWPRLIRFAGEILSLGVRTVAINPNIHP
DYPDDSPEMMLVKIKEWKISFPYLVDETQEVSKKLKAMCTPDIYLYDGEQRLYYHGRMDDNWKNEKQVSRKELEYAVHQL
VKGNPAPINQMPSMGCSIKWKE

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20903; Mature: 20772

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLESEKIPLGSLLPDFRLADPNGKTYSSDQISGSTGLLLIVTCNHCPYAQAIWPRLIR
CCCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
FAGEILSLGVRTVAINPNIHPDYPDDSPEMMLVKIKEWKISFPYLVDETQEVSKKLKAMC
HHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCEEECCHHHHHHHHHHHC
TPDIYLYDGEQRLYYHGRMDDNWKNEKQVSRKELEYAVHQLVKGNPAPINQMPSMGCSIK
CCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
WKE
ECC
>Mature Secondary Structure 
SLLESEKIPLGSLLPDFRLADPNGKTYSSDQISGSTGLLLIVTCNHCPYAQAIWPRLIR
CCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
FAGEILSLGVRTVAINPNIHPDYPDDSPEMMLVKIKEWKISFPYLVDETQEVSKKLKAMC
HHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCEEECCHHHHHHHHHHHC
TPDIYLYDGEQRLYYHGRMDDNWKNEKQVSRKELEYAVHQLVKGNPAPINQMPSMGCSIK
CCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
WKE
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA