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The map label for this gene is 45658707

Identifier: 45658707

GI number: 45658707

Start: 3473251

End: 3474477

Strand: Reverse

Name: 45658707

Synonym: LIC12877

Alternate gene names: NA

Gene position: 3474477-3473251 (Counterclockwise)

Preceding gene: 45658708

Following gene: 45658706

Centisome position: 81.23

GC content: 33.74

Gene sequence:

>1227_bases
TTGCCAGCAATAACACCCGATCACACTCCTATCAACGCGGAATCTTTTCAGGAAGTGGAAATTATCAGTAACCACTATAG
AGAGATTGAAACGAAATCATTGGATCATTTTAAGGATGAGTTTAGAAAAAACGAAAACTCCTTGGATAAGGTTTCAACGG
TCGCTTTGATTGCTTTTCTGAAAAAAAGCGGAAACGTATATCAGGATTGGAGAATATTAAAAAAGAATCTTACAGATAAA
TACACAGAACTGCAGAGTAGTCGAAATTCGGAATACGAGCTTATTTATCGTAAACTAGTCACAAATGATAAAATAAAACC
AACCGCCTTGATTGGGGATATATTTCAGTCCGTGGTGGAAGATGTTTTAAATGTCTTATATATCTGGACCGATTCGGAAA
AAAAAGAACAATCTAAGCTTATTGAAAGTATTAGAGATCAATCTTCAAAAGACAAGGATGAGAATCTCAAAAAACTTTAT
CGAGATATGATACAAAAAAAACTGAAAGAAAGGGATCGCAGTTTTATCCTATTTCAGGATTTGTTAAAAGAATCCGCATT
CAATTGGAACCAAGCCTATCGAAAAAAATTTCATCAGAGTTTAGCCGCTACCGTAAAAAAACTAGAATCGTCTAAGGCTA
GTAAGGCGGAAATTCTAAACAATAAAAAGGCTGCTAAAAAAGCGATTTTAGGTTTCTACGAAGAGGATAAGATTCAAAAA
TATTCAATTTTTATGGTAGACTATTTTTTGGATCGGCTTCTTGAAAAAGAATCGATCGTAGAAAACAAAATTTTACTTCC
TAAAGAACCAGAGGTTGTCCCAAGTAAAGAAAAAGAGAATATGGATTCTATTCAAAAAAAATCTGAAATTCAAACTTCCT
TAAGTCGAGTTGTAATTGAACCGGAATTGAAAAATGAAAAACCGAATCCTACAAAAAAAGAATGTCCAATTACGGATCTT
CCGGATCATCTAATCAAAGAATGTTATTCTGATTATTTGATTGTGGATCTTTCCACAAAAGAAAAACGTCTCGAACTACA
TCGAATCCGCTTAGGAAAAGAAAATCAAAATACAAGAGCCGAAGCGATTGAATTTTTCAGTCATTGTGCTAACAAAGATA
TTTCTGCTGTAATGTTAGCTGAGTCGGCTTTGAGAAGACACAATATCACTCAAGAAGAAGAGGAAAAATTGAACGAGATG
ATTCGTAAACAAAATGCTTGTAAGTGA

Upstream 100 bases:

>100_bases
GAATTAGAGTATGCGGTTCATCAACTCGTAAAAGGAAATCCTGCTCCTATCAATCAAATGCCCTCGATGGGATGTTCTAT
AAAATGGAAGGAGTAGTCAC

Downstream 100 bases:

>100_bases
AAAGCCTGAGGTCAAATTGATTTAAAATCATAATAATTATTACATCACGGAATCTTTATATAATAAATTTTAAATTTGAG
AATCCCAAAACAGTAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MPAITPDHTPINAESFQEVEIISNHYREIETKSLDHFKDEFRKNENSLDKVSTVALIAFLKKSGNVYQDWRILKKNLTDK
YTELQSSRNSEYELIYRKLVTNDKIKPTALIGDIFQSVVEDVLNVLYIWTDSEKKEQSKLIESIRDQSSKDKDENLKKLY
RDMIQKKLKERDRSFILFQDLLKESAFNWNQAYRKKFHQSLAATVKKLESSKASKAEILNNKKAAKKAILGFYEEDKIQK
YSIFMVDYFLDRLLEKESIVENKILLPKEPEVVPSKEKENMDSIQKKSEIQTSLSRVVIEPELKNEKPNPTKKECPITDL
PDHLIKECYSDYLIVDLSTKEKRLELHRIRLGKENQNTRAEAIEFFSHCANKDISAVMLAESALRRHNITQEEEEKLNEM
IRKQNACK

Sequences:

>Translated_408_residues
MPAITPDHTPINAESFQEVEIISNHYREIETKSLDHFKDEFRKNENSLDKVSTVALIAFLKKSGNVYQDWRILKKNLTDK
YTELQSSRNSEYELIYRKLVTNDKIKPTALIGDIFQSVVEDVLNVLYIWTDSEKKEQSKLIESIRDQSSKDKDENLKKLY
RDMIQKKLKERDRSFILFQDLLKESAFNWNQAYRKKFHQSLAATVKKLESSKASKAEILNNKKAAKKAILGFYEEDKIQK
YSIFMVDYFLDRLLEKESIVENKILLPKEPEVVPSKEKENMDSIQKKSEIQTSLSRVVIEPELKNEKPNPTKKECPITDL
PDHLIKECYSDYLIVDLSTKEKRLELHRIRLGKENQNTRAEAIEFFSHCANKDISAVMLAESALRRHNITQEEEEKLNEM
IRKQNACK
>Mature_407_residues
PAITPDHTPINAESFQEVEIISNHYREIETKSLDHFKDEFRKNENSLDKVSTVALIAFLKKSGNVYQDWRILKKNLTDKY
TELQSSRNSEYELIYRKLVTNDKIKPTALIGDIFQSVVEDVLNVLYIWTDSEKKEQSKLIESIRDQSSKDKDENLKKLYR
DMIQKKLKERDRSFILFQDLLKESAFNWNQAYRKKFHQSLAATVKKLESSKASKAEILNNKKAAKKAILGFYEEDKIQKY
SIFMVDYFLDRLLEKESIVENKILLPKEPEVVPSKEKENMDSIQKKSEIQTSLSRVVIEPELKNEKPNPTKKECPITDLP
DHLIKECYSDYLIVDLSTKEKRLELHRIRLGKENQNTRAEAIEFFSHCANKDISAVMLAESALRRHNITQEEEEKLNEMI
RKQNACK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47843; Mature: 47712

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAITPDHTPINAESFQEVEIISNHYREIETKSLDHFKDEFRKNENSLDKVSTVALIAFL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KKSGNVYQDWRILKKNLTDKYTELQSSRNSEYELIYRKLVTNDKIKPTALIGDIFQSVVE
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
DVLNVLYIWTDSEKKEQSKLIESIRDQSSKDKDENLKKLYRDMIQKKLKERDRSFILFQD
HHHHHEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLKESAFNWNQAYRKKFHQSLAATVKKLESSKASKAEILNNKKAAKKAILGFYEEDKIQK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSIFMVDYFLDRLLEKESIVENKILLPKEPEVVPSKEKENMDSIQKKSEIQTSLSRVVIE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEC
PELKNEKPNPTKKECPITDLPDHLIKECYSDYLIVDLSTKEKRLELHRIRLGKENQNTRA
CHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHH
EAIEFFSHCANKDISAVMLAESALRRHNITQEEEEKLNEMIRKQNACK
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PAITPDHTPINAESFQEVEIISNHYREIETKSLDHFKDEFRKNENSLDKVSTVALIAFL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KKSGNVYQDWRILKKNLTDKYTELQSSRNSEYELIYRKLVTNDKIKPTALIGDIFQSVVE
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
DVLNVLYIWTDSEKKEQSKLIESIRDQSSKDKDENLKKLYRDMIQKKLKERDRSFILFQD
HHHHHEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLKESAFNWNQAYRKKFHQSLAATVKKLESSKASKAEILNNKKAAKKAILGFYEEDKIQK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSIFMVDYFLDRLLEKESIVENKILLPKEPEVVPSKEKENMDSIQKKSEIQTSLSRVVIE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEC
PELKNEKPNPTKKECPITDLPDHLIKECYSDYLIVDLSTKEKRLELHRIRLGKENQNTRA
CHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHH
EAIEFFSHCANKDISAVMLAESALRRHNITQEEEEKLNEMIRKQNACK
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA