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The map label for this gene is 45658668

Identifier: 45658668

GI number: 45658668

Start: 3442504

End: 3443598

Strand: Direct

Name: 45658668

Synonym: LIC12838

Alternate gene names: NA

Gene position: 3442504-3443598 (Clockwise)

Preceding gene: 45658667

Following gene: 45658669

Centisome position: 80.49

GC content: 30.96

Gene sequence:

>1095_bases
ATGTCCCAAGCACCACGTAGAAATCTTCCGGAAAAAACAAACCGAACGATTGCGACTTTACTATGTGTATTTTTTATTTC
CATATACTTTTGGAATCTAATTTCTATTAGATCCTTTAATATATTCTATACTTTGGATATACTTGACTCGGTGTCGAATC
GGATTCAAACTTTTTCTTTCTTAGAACTTTTAAGTCATAGATTCGAAAATCGTTTTCAATACGATATTCCAAAATGGATT
TATGTTTTGAACATTTTCAAATTTATAGAATCGTTCTTCATTCCAGTGTTTTTATTTCTTTTTTCTACGATTTTTTCTTA
CACTCTGTGGGCCTTAATTCACGAATGTGTTCACGGAAATTTTTCAAATTCTAGAAACGAAAACCGTTTTTGGGGAAGAT
TCCTTTGTATTCTTTTTGGGACTCCATTTCAAGTTGTTAAAACGGCTCATTTGGTTCATCATAAATTTAATCGTTCCCAA
GGAGAGCGAATCGAATATATAGAAAAAAACGCTGGTCCGATTTTATTTCAAAAACTTCTATATTACGTCAGACTTTTTAT
GGGAACGTATTTCTTAGAAGTATTAGGAGGTTTTCTTTTAAGTTTACCTCTTTCTTTTACCTCGCCAATTACCGAAAAAT
ATTTTTCTAAGTTTCCAGTATATAAGACTTTCTTTAAACAAATTCAAAAGCCTGAAATTGTTCAGGAATTAAGAATCGAT
TCTATACTGATTCTTATTTTATTTGGATGTGCTTTTTATCTTTGTGGTCCAAACACAGTTTTTTTAATTTCAGTCTTAAT
TCTTAGAGGATGGATCGTTTCTTTTTTAGATCATTCTTATCATTATGGAAAAGAATTAGAAGATGTAAATTCAGCTTACA
ATTTATATTTGCCAAAATTTTTCTCTTACCTATTTCTCAACTTCAACTATCACAGAGTACATCATCGTTTTCCGGGTTGT
TCTTGGAACCGACTTCCAATTCAATTTAAAAATTCCAACGATAGTATGGATCTTTCTTTATGGATACAATCCATTCGACA
ACTTTCAGGACTTTTAATCCTTCCAGAAAAATCGGATCCTCATAAATCAATTTGA

Upstream 100 bases:

>100_bases
TCATCCAGATTTTCAACGGCTAAATTCCGATTCAATTAAAATTCAAGGTATCTAAAAAACTCATTTCTTAATAAAGTGGA
AAAATCTATTTTGAAATCTG

Downstream 100 bases:

>100_bases
TTGTCAAAAGGGAGTTTTTTTACATTCTGTCGTTTAATGTACTATAATCATAAAAATGTATTAGATACGGAACAGTTCTC
AAAACCAGATCTTGATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSQAPRRNLPEKTNRTIATLLCVFFISIYFWNLISIRSFNIFYTLDILDSVSNRIQTFSFLELLSHRFENRFQYDIPKWI
YVLNIFKFIESFFIPVFLFLFSTIFSYTLWALIHECVHGNFSNSRNENRFWGRFLCILFGTPFQVVKTAHLVHHKFNRSQ
GERIEYIEKNAGPILFQKLLYYVRLFMGTYFLEVLGGFLLSLPLSFTSPITEKYFSKFPVYKTFFKQIQKPEIVQELRID
SILILILFGCAFYLCGPNTVFLISVLILRGWIVSFLDHSYHYGKELEDVNSAYNLYLPKFFSYLFLNFNYHRVHHRFPGC
SWNRLPIQFKNSNDSMDLSLWIQSIRQLSGLLILPEKSDPHKSI

Sequences:

>Translated_364_residues
MSQAPRRNLPEKTNRTIATLLCVFFISIYFWNLISIRSFNIFYTLDILDSVSNRIQTFSFLELLSHRFENRFQYDIPKWI
YVLNIFKFIESFFIPVFLFLFSTIFSYTLWALIHECVHGNFSNSRNENRFWGRFLCILFGTPFQVVKTAHLVHHKFNRSQ
GERIEYIEKNAGPILFQKLLYYVRLFMGTYFLEVLGGFLLSLPLSFTSPITEKYFSKFPVYKTFFKQIQKPEIVQELRID
SILILILFGCAFYLCGPNTVFLISVLILRGWIVSFLDHSYHYGKELEDVNSAYNLYLPKFFSYLFLNFNYHRVHHRFPGC
SWNRLPIQFKNSNDSMDLSLWIQSIRQLSGLLILPEKSDPHKSI
>Mature_363_residues
SQAPRRNLPEKTNRTIATLLCVFFISIYFWNLISIRSFNIFYTLDILDSVSNRIQTFSFLELLSHRFENRFQYDIPKWIY
VLNIFKFIESFFIPVFLFLFSTIFSYTLWALIHECVHGNFSNSRNENRFWGRFLCILFGTPFQVVKTAHLVHHKFNRSQG
ERIEYIEKNAGPILFQKLLYYVRLFMGTYFLEVLGGFLLSLPLSFTSPITEKYFSKFPVYKTFFKQIQKPEIVQELRIDS
ILILILFGCAFYLCGPNTVFLISVLILRGWIVSFLDHSYHYGKELEDVNSAYNLYLPKFFSYLFLNFNYHRVHHRFPGCS
WNRLPIQFKNSNDSMDLSLWIQSIRQLSGLLILPEKSDPHKSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43297; Mature: 43166

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAPRRNLPEKTNRTIATLLCVFFISIYFWNLISIRSFNIFYTLDILDSVSNRIQTFSF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHH
LELLSHRFENRFQYDIPKWIYVLNIFKFIESFFIPVFLFLFSTIFSYTLWALIHECVHGN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FSNSRNENRFWGRFLCILFGTPFQVVKTAHLVHHKFNRSQGERIEYIEKNAGPILFQKLL
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHH
YYVRLFMGTYFLEVLGGFLLSLPLSFTSPITEKYFSKFPVYKTFFKQIQKPEIVQELRID
HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
SILILILFGCAFYLCGPNTVFLISVLILRGWIVSFLDHSYHYGKELEDVNSAYNLYLPKF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FSYLFLNFNYHRVHHRFPGCSWNRLPIQFKNSNDSMDLSLWIQSIRQLSGLLILPEKSDP
HHHHHHCCCHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCC
HKSI
CCCC
>Mature Secondary Structure 
SQAPRRNLPEKTNRTIATLLCVFFISIYFWNLISIRSFNIFYTLDILDSVSNRIQTFSF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHH
LELLSHRFENRFQYDIPKWIYVLNIFKFIESFFIPVFLFLFSTIFSYTLWALIHECVHGN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FSNSRNENRFWGRFLCILFGTPFQVVKTAHLVHHKFNRSQGERIEYIEKNAGPILFQKLL
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHH
YYVRLFMGTYFLEVLGGFLLSLPLSFTSPITEKYFSKFPVYKTFFKQIQKPEIVQELRID
HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
SILILILFGCAFYLCGPNTVFLISVLILRGWIVSFLDHSYHYGKELEDVNSAYNLYLPKF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FSYLFLNFNYHRVHHRFPGCSWNRLPIQFKNSNDSMDLSLWIQSIRQLSGLLILPEKSDP
HHHHHHCCCHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCC
HKSI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA