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The map label for this gene is 45658627

Identifier: 45658627

GI number: 45658627

Start: 3403660

End: 3404520

Strand: Reverse

Name: 45658627

Synonym: LIC12796

Alternate gene names: NA

Gene position: 3404520-3403660 (Counterclockwise)

Preceding gene: 45658630

Following gene: 45658626

Centisome position: 79.6

GC content: 37.75

Gene sequence:

>861_bases
ATGATTGCGGATGAAATCCAACTCGTGACTCGGATTTCCGATTTGGATACTCAGAGACACGTTACCAGCAGGACTTATGA
GAATTTTTGTCTGGAAGGTAGATTTCGAACTCTTGAAAAAAATGGTTTTTCGATTCGGGAGATTCTATCTCAAGGGATAA
AAATTCATCCTTTAGAGTCTCAAATTCGATTTCTGGCTCAACAAATGGAAGGAGCCAGTTTAAAAACGGAAACGAAAGCT
TTTCCTCTGAAAGATGGTAAGATTTTTTGGGATCAAAAAGTTTTATCGGATACTGGAACGATTGCGGCCGAAATTAAAAC
TCTTACCTTTTCAGAAAAGGACGGGCATCCAATTGATCTTCTTCCTTTAGAGAAAACGGAGATGAGCGGTTTTGATCAAT
TTCCACAGATTCCTGATTTTAGAGGAACTTGTAAAACTGTGGATACTTCCATGATCACTCTCTATAGCGAAAGAAATATA
TTTGGAGAGTATAATCCGGCTTATCTTTGGAGGATAGTGGAAGATTCCAGATGGTTTTTTTCCACAGAAACCGGTTTGAC
CTTGGACCGTTTTGTAGAAATGGATACAACTTTATTTTTTATGGGCGGTGTATTTCGATTTTTTCATCCGGTTCCTGCGG
GAAGAAAAATTAAAGTAAGTACTTGGATTCATTCCTTTGAAAAGATTCGAAGTTATATGAGACACGAGGTTACAGACATT
GAAACTGGTTTAAGATATTTTGCGGTTCAGGATGAGCAGTTAGTAGTTTCTCTTACCAAGTCTCGACCTAAAAAAGCTCC
TGATGAGTTTCAACAACTGGTAGGGGACTATGTGGAGAATTTTGAATATTCTAAAAAATGA

Upstream 100 bases:

>100_bases
AGGCAAATGTGAGGAAATGCCATTTCGCTCCATTTCGCTATTTCGCTCCCTACGGGTCGCGAAATAGGGTCAGAATCTCC
TAAAGAATACGGAGGCCGAT

Downstream 100 bases:

>100_bases
ATTTATGATTAAGAATTTTAAGTTTGGAGAAAAAAAATGAAATTAACAAAACCTTTGGCAATTTGTACACCAAGAAGAAC
TCCTTTTGCTCAGATCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIADEIQLVTRISDLDTQRHVTSRTYENFCLEGRFRTLEKNGFSIREILSQGIKIHPLESQIRFLAQQMEGASLKTETKA
FPLKDGKIFWDQKVLSDTGTIAAEIKTLTFSEKDGHPIDLLPLEKTEMSGFDQFPQIPDFRGTCKTVDTSMITLYSERNI
FGEYNPAYLWRIVEDSRWFFSTETGLTLDRFVEMDTTLFFMGGVFRFFHPVPAGRKIKVSTWIHSFEKIRSYMRHEVTDI
ETGLRYFAVQDEQLVVSLTKSRPKKAPDEFQQLVGDYVENFEYSKK

Sequences:

>Translated_286_residues
MIADEIQLVTRISDLDTQRHVTSRTYENFCLEGRFRTLEKNGFSIREILSQGIKIHPLESQIRFLAQQMEGASLKTETKA
FPLKDGKIFWDQKVLSDTGTIAAEIKTLTFSEKDGHPIDLLPLEKTEMSGFDQFPQIPDFRGTCKTVDTSMITLYSERNI
FGEYNPAYLWRIVEDSRWFFSTETGLTLDRFVEMDTTLFFMGGVFRFFHPVPAGRKIKVSTWIHSFEKIRSYMRHEVTDI
ETGLRYFAVQDEQLVVSLTKSRPKKAPDEFQQLVGDYVENFEYSKK
>Mature_286_residues
MIADEIQLVTRISDLDTQRHVTSRTYENFCLEGRFRTLEKNGFSIREILSQGIKIHPLESQIRFLAQQMEGASLKTETKA
FPLKDGKIFWDQKVLSDTGTIAAEIKTLTFSEKDGHPIDLLPLEKTEMSGFDQFPQIPDFRGTCKTVDTSMITLYSERNI
FGEYNPAYLWRIVEDSRWFFSTETGLTLDRFVEMDTTLFFMGGVFRFFHPVPAGRKIKVSTWIHSFEKIRSYMRHEVTDI
ETGLRYFAVQDEQLVVSLTKSRPKKAPDEFQQLVGDYVENFEYSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33281; Mature: 33281

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIADEIQLVTRISDLDTQRHVTSRTYENFCLEGRFRTLEKNGFSIREILSQGIKIHPLES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHCCCEEEEHHH
QIRFLAQQMEGASLKTETKAFPLKDGKIFWDQKVLSDTGTIAAEIKTLTFSEKDGHPIDL
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHCCCCCEEEEEEEEEECCCCCCCEEE
LPLEKTEMSGFDQFPQIPDFRGTCKTVDTSMITLYSERNIFGEYNPAYLWRIVEDSRWFF
EECCHHCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEE
STETGLTLDRFVEMDTTLFFMGGVFRFFHPVPAGRKIKVSTWIHSFEKIRSYMRHEVTDI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
ETGLRYFAVQDEQLVVSLTKSRPKKAPDEFQQLVGDYVENFEYSKK
HHCCEEEEECCCCEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIADEIQLVTRISDLDTQRHVTSRTYENFCLEGRFRTLEKNGFSIREILSQGIKIHPLES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHCCCEEEEHHH
QIRFLAQQMEGASLKTETKAFPLKDGKIFWDQKVLSDTGTIAAEIKTLTFSEKDGHPIDL
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHCCCCCEEEEEEEEEECCCCCCCEEE
LPLEKTEMSGFDQFPQIPDFRGTCKTVDTSMITLYSERNIFGEYNPAYLWRIVEDSRWFF
EECCHHCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEE
STETGLTLDRFVEMDTTLFFMGGVFRFFHPVPAGRKIKVSTWIHSFEKIRSYMRHEVTDI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
ETGLRYFAVQDEQLVVSLTKSRPKKAPDEFQQLVGDYVENFEYSKK
HHCCEEEEECCCCEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA