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The map label for this gene is tnhA [H]

Identifier: 45658556

GI number: 45658556

Start: 3312795

End: 3313166

Strand: Direct

Name: tnhA [H]

Synonym: LIC12722

Alternate gene names: 45658556

Gene position: 3312795-3313166 (Clockwise)

Preceding gene: 45658555

Following gene: 45658558

Centisome position: 77.45

GC content: 43.01

Gene sequence:

>372_bases
ATGTTCTTACTCTGTGAAGTCTGCGACTTTAAGAGATTTAAAACAGCGGGTTCTTTCATGAGTTTTCTTGGACTTGTTCC
CGGAGAATATTCTAGCGGTTCCAAAAGAAAACAAACAGGGATTACAAAAACTGGAAGTCCCAGACATTTTGACGGAAGCT
GCTTGGCAGCATTGCTTCCCCGTAAGATCGTAGCCGCAAGAAGGACCGGACAACCTGCATTAGTCGTTGCTTTAGCAGAA
AAAGCTTCCTTAAGGTTACACAAGAAATTTCGTAACTTACAGCTAAGAGGAAAAAGCCCTCAGGTAATGATAACCGCAGT
TTCAAGAGAACTATCCGGATTTATTTGGGCGGCGATGAATCTGGCAGCTTAA

Upstream 100 bases:

>100_bases
GTTCAGGAAGAGAATCTCAAAGCGATGGATCAAGAGTGAAGCTTTTAGAGAACGAGTGGGGATCTTAAGATGTTTTCGAG
GAGTGGATTATTTAACGGCC

Downstream 100 bases:

>100_bases
AGTAGTTTTAAAGAGAAATGAAAATTCATCCAATACGAACTCGTTAGAGAAGATGTACGATAAAGGAGGAATATTTGTTG
ACTCAGTGTTGAAGCAAATC

Product: IS1533 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MFLLCEVCDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRHFDGSCLAALLPRKIVAARRTGQPALVVALAE
KASLRLHKKFRNLQLRGKSPQVMITAVSRELSGFIWAAMNLAA

Sequences:

>Translated_123_residues
MFLLCEVCDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRHFDGSCLAALLPRKIVAARRTGQPALVVALAE
KASLRLHKKFRNLQLRGKSPQVMITAVSRELSGFIWAAMNLAA
>Mature_123_residues
MFLLCEVCDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRHFDGSCLAALLPRKIVAARRTGQPALVVALAE
KASLRLHKKFRNLQLRGKSPQVMITAVSRELSGFIWAAMNLAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13444; Mature: 13444

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLCEVCDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRHFDGSCLAALLP
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHH
RKIVAARRTGQPALVVALAEKASLRLHKKFRNLQLRGKSPQVMITAVSRELSGFIWAAMN
HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCEECCCCCCEEEEEHHHHHHHHHHHHHH
LAA
HCC
>Mature Secondary Structure
MFLLCEVCDFKRFKTAGSFMSFLGLVPGEYSSGSKRKQTGITKTGSPRHFDGSCLAALLP
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHH
RKIVAARRTGQPALVVALAEKASLRLHKKFRNLQLRGKSPQVMITAVSRELSGFIWAAMN
HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCEECCCCCCEEEEEHHHHHHHHHHHHHH
LAA
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8171119 [H]