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The map label for this gene is 45658558

Identifier: 45658558

GI number: 45658558

Start: 3316322

End: 3316849

Strand: Direct

Name: 45658558

Synonym: LIC12724

Alternate gene names: NA

Gene position: 3316322-3316849 (Clockwise)

Preceding gene: 45658556

Following gene: 45658559

Centisome position: 77.54

GC content: 36.93

Gene sequence:

>528_bases
ATGGACACAAGAAAGTCGGAACTCAATCCGGAATTGTTTGATATGATGAAACAAGGAAAGCTATCAGCCGGAAAAATTCT
GAATCTGATTGCTCTGAAAGAACTTGTAGATAGATTTGCGGTTACTCCTTTTATTGAGAAAGATAAGCTTGAGCAAATCA
AAGAGAAAACAGGTGTAGAACCGGACATTCTAACGTGGGGAGACTATTTTCAAACCGAAATCGCATCCAGATATTTCGAA
AAGTCGGAATTCGAATTCAAAAAAATCTTGGAAACGATTCGATTCGATCTTATTTCCGCACATTTAATTTTTTCCGGAAA
ACCAGAATACTTTCAAGATTCCATTAGAGGCCAAGCTCTGATTTCAAAATCCATTGACTCTACTTTTTGGACTTTGGAAG
ATGAAGAAGCAATTCATCTGGAAACACTTCTCGAATATTATACTCAGATGGGAATTGGAGAAAAACCGTTGACCATATCC
GACCGAATCTGGTATGAAAGTTTCGAATTGGAGAAAAAAGCAGTTTAA

Upstream 100 bases:

>100_bases
CCCAACTTAGAGAAAATCAAATCTGCACTACTGAAATAGTTTTTAGATAGATCTAGAAAAAATCCAAGGGAAGGTTTGAA
AATATCCCGAAAAAGAATGT

Downstream 100 bases:

>100_bases
TGGGATTCATAGACCGAGACACAATCGATCTGGGTTCAGGAAACAAAATCCTGACTTTAAGCTTCAACAATCCTGAAACC
AGAAATTCTATGACTCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MDTRKSELNPELFDMMKQGKLSAGKILNLIALKELVDRFAVTPFIEKDKLEQIKEKTGVEPDILTWGDYFQTEIASRYFE
KSEFEFKKILETIRFDLISAHLIFSGKPEYFQDSIRGQALISKSIDSTFWTLEDEEAIHLETLLEYYTQMGIGEKPLTIS
DRIWYESFELEKKAV

Sequences:

>Translated_175_residues
MDTRKSELNPELFDMMKQGKLSAGKILNLIALKELVDRFAVTPFIEKDKLEQIKEKTGVEPDILTWGDYFQTEIASRYFE
KSEFEFKKILETIRFDLISAHLIFSGKPEYFQDSIRGQALISKSIDSTFWTLEDEEAIHLETLLEYYTQMGIGEKPLTIS
DRIWYESFELEKKAV
>Mature_175_residues
MDTRKSELNPELFDMMKQGKLSAGKILNLIALKELVDRFAVTPFIEKDKLEQIKEKTGVEPDILTWGDYFQTEIASRYFE
KSEFEFKKILETIRFDLISAHLIFSGKPEYFQDSIRGQALISKSIDSTFWTLEDEEAIHLETLLEYYTQMGIGEKPLTIS
DRIWYESFELEKKAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20479; Mature: 20479

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRKSELNPELFDMMKQGKLSAGKILNLIALKELVDRFAVTPFIEKDKLEQIKEKTGVE
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDILTWGDYFQTEIASRYFEKSEFEFKKILETIRFDLISAHLIFSGKPEYFQDSIRGQAL
CCEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ISKSIDSTFWTLEDEEAIHLETLLEYYTQMGIGEKPLTISDRIWYESFELEKKAV
HHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTRKSELNPELFDMMKQGKLSAGKILNLIALKELVDRFAVTPFIEKDKLEQIKEKTGVE
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDILTWGDYFQTEIASRYFEKSEFEFKKILETIRFDLISAHLIFSGKPEYFQDSIRGQAL
CCEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ISKSIDSTFWTLEDEEAIHLETLLEYYTQMGIGEKPLTISDRIWYESFELEKKAV
HHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA