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The map label for this gene is 45658486

Identifier: 45658486

GI number: 45658486

Start: 3211812

End: 3213356

Strand: Reverse

Name: 45658486

Synonym: LIC12649

Alternate gene names: NA

Gene position: 3213356-3211812 (Counterclockwise)

Preceding gene: 45658490

Following gene: 45658485

Centisome position: 75.13

GC content: 30.36

Gene sequence:

>1545_bases
ATGTTTTTTAAATTCATTTTATCAGTTTTAATTATATTACAATTAAGTTGTAATACTACATCGGCTATTGTATATACTTT
TAAAGGGGAAGAAAAAATTTATCCGTATTCTGGAGCGGCACTTGCTTTCGAACGTTTGATTTGGCAGACGTGTCCCCCTA
AGCCATTTTCAAAAAGTTTTTGGGACGTATTGGTTCTAATCGATCTTCCTTTTACCCTAGTGTTTGATACCATTCTTTTG
CCAGTATCTTTTCCTTATTATTTATACGTAGAATCCGGTTCACCTGGATCTAAAAGTTGGTATTATAAAAAATGGAAAGA
AAAACTTTATACTTTTATAGCAAAGAATTCTGCGAACGACATTCTAAATTTGACTTTAGAAGAAAGAGATAGCAGATTCG
AATATCAAGAATTGCTAAAGTCTATTTCACGTTTGGAAGAAAGAGTTTTACATTTACAAAAGAAAGGAATTGCTCTCAAT
AAAGATTTACAGTACTTGATTTCAATTTCGTCTAACGGTAAAATAGATCCAGGTTTACAATTGAAACAACACGTTGAAAT
TGTAGGAATCATTTATGAACAATTTAGGGAACATCCTGAATTAGAATCTTCCTATGATAGAAATTTATGGGAAAAATATT
TTGAAATCGTATGGAGAAACTTTTTTTCTAAAGGGTTTCTAATTCGTAATCCGGATATTTTAAAGAAAATTTTAGACGAA
TTTTCAAATAAAAAAGATGCAGCCATTTTGTTTCAAGAGATTGCATCTTTCTATTCGGAAGAAGAATATGATAAACAACA
CTTCTCTTATTTTGTCAAAAGCCCTAGTTCTCAAAATTCTTTTGAATCTTTAGAAACTCGTTCCAACTTAGGATTTCCAA
TTCCGAAGACAAATCAAGAATTTTGGAAGAATCAAATTCAAATTTTATTGGAACTAGATAGAATGATTCGTAGAGATTTT
ACTCATTTAAAAAATAGTTTAGATCCAGTTTGGGAAGAGGCAATTTCATCCGGAGTAGTTTCTTATAATCAAACTGCTTT
GGAAAAAGTGTTTCAAGAGTTTCCGAAAGAAACAAAAGTTTCTATTGGAAATATATTTAAAAAAGTAATAGATAGTAATA
ATCTTGATTCTATACAGTTTGTAGGAAGGCATATTTCCGATTTTAGTATATATTTTGCATCTGATAGAGATATGATTCTT
AGAGTCCTTGGATCTCCTAAGATACTTGAAAAATTATTACAAGCGGGACTGGATCCGAATCGGATCTATGGATATAAAAA
AAGTGTATTCGTTAATGACAGATGGATCGATGGGATTGAAGAAGATACTTTTTTGATACTTTGTTTAGAGGATAGTAAAG
AAACATCCATAAGTTCATTACAATTATTATTGAAATACGGAGCTAAAACGGATTTGGCTGTAAAAAGATATTCTCGTGGA
AAAGAGTATTTATATAGTCCTCATGCTGTCTTAGAAAATCCTGATTATGATTTTTCTCTTAAACGTAAGATATTTACAGA
ATGGACGAAAAAGAAAGTTAAGTAG

Upstream 100 bases:

>100_bases
ATTAACAAAACTGCTTCAATTGCCCGTTTCCATAAAATAGAAACAGATGGAGAATTAATTTTTCAACAATTCTATTATAT
TTTTTTATATAGGTTCTTTT

Downstream 100 bases:

>100_bases
CGTGAGTTTGGCGTAAGAATATCTGGGCGAATAATAAATTCAATGCTGCTCTCTATCATAACCACAAATATTTGATCTCA
ATATAAATCTGTCGGAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MFFKFILSVLIILQLSCNTTSAIVYTFKGEEKIYPYSGAALAFERLIWQTCPPKPFSKSFWDVLVLIDLPFTLVFDTILL
PVSFPYYLYVESGSPGSKSWYYKKWKEKLYTFIAKNSANDILNLTLEERDSRFEYQELLKSISRLEERVLHLQKKGIALN
KDLQYLISISSNGKIDPGLQLKQHVEIVGIIYEQFREHPELESSYDRNLWEKYFEIVWRNFFSKGFLIRNPDILKKILDE
FSNKKDAAILFQEIASFYSEEEYDKQHFSYFVKSPSSQNSFESLETRSNLGFPIPKTNQEFWKNQIQILLELDRMIRRDF
THLKNSLDPVWEEAISSGVVSYNQTALEKVFQEFPKETKVSIGNIFKKVIDSNNLDSIQFVGRHISDFSIYFASDRDMIL
RVLGSPKILEKLLQAGLDPNRIYGYKKSVFVNDRWIDGIEEDTFLILCLEDSKETSISSLQLLLKYGAKTDLAVKRYSRG
KEYLYSPHAVLENPDYDFSLKRKIFTEWTKKKVK

Sequences:

>Translated_514_residues
MFFKFILSVLIILQLSCNTTSAIVYTFKGEEKIYPYSGAALAFERLIWQTCPPKPFSKSFWDVLVLIDLPFTLVFDTILL
PVSFPYYLYVESGSPGSKSWYYKKWKEKLYTFIAKNSANDILNLTLEERDSRFEYQELLKSISRLEERVLHLQKKGIALN
KDLQYLISISSNGKIDPGLQLKQHVEIVGIIYEQFREHPELESSYDRNLWEKYFEIVWRNFFSKGFLIRNPDILKKILDE
FSNKKDAAILFQEIASFYSEEEYDKQHFSYFVKSPSSQNSFESLETRSNLGFPIPKTNQEFWKNQIQILLELDRMIRRDF
THLKNSLDPVWEEAISSGVVSYNQTALEKVFQEFPKETKVSIGNIFKKVIDSNNLDSIQFVGRHISDFSIYFASDRDMIL
RVLGSPKILEKLLQAGLDPNRIYGYKKSVFVNDRWIDGIEEDTFLILCLEDSKETSISSLQLLLKYGAKTDLAVKRYSRG
KEYLYSPHAVLENPDYDFSLKRKIFTEWTKKKVK
>Mature_514_residues
MFFKFILSVLIILQLSCNTTSAIVYTFKGEEKIYPYSGAALAFERLIWQTCPPKPFSKSFWDVLVLIDLPFTLVFDTILL
PVSFPYYLYVESGSPGSKSWYYKKWKEKLYTFIAKNSANDILNLTLEERDSRFEYQELLKSISRLEERVLHLQKKGIALN
KDLQYLISISSNGKIDPGLQLKQHVEIVGIIYEQFREHPELESSYDRNLWEKYFEIVWRNFFSKGFLIRNPDILKKILDE
FSNKKDAAILFQEIASFYSEEEYDKQHFSYFVKSPSSQNSFESLETRSNLGFPIPKTNQEFWKNQIQILLELDRMIRRDF
THLKNSLDPVWEEAISSGVVSYNQTALEKVFQEFPKETKVSIGNIFKKVIDSNNLDSIQFVGRHISDFSIYFASDRDMIL
RVLGSPKILEKLLQAGLDPNRIYGYKKSVFVNDRWIDGIEEDTFLILCLEDSKETSISSLQLLLKYGAKTDLAVKRYSRG
KEYLYSPHAVLENPDYDFSLKRKIFTEWTKKKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60278; Mature: 60278

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKFILSVLIILQLSCNTTSAIVYTFKGEEKIYPYSGAALAFERLIWQTCPPKPFSKSF
CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEECCCCCHHHHHHHHHHHCCCCCCCCHHH
WDVLVLIDLPFTLVFDTILLPVSFPYYLYVESGSPGSKSWYYKKWKEKLYTFIAKNSAND
HHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC
ILNLTLEERDSRFEYQELLKSISRLEERVLHLQKKGIALNKDLQYLISISSNGKIDPGLQ
EEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCH
LKQHVEIVGIIYEQFREHPELESSYDRNLWEKYFEIVWRNFFSKGFLIRNPDILKKILDE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHH
FSNKKDAAILFQEIASFYSEEEYDKQHFSYFVKSPSSQNSFESLETRSNLGFPIPKTNQE
HCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHH
FWKNQIQILLELDRMIRRDFTHLKNSLDPVWEEAISSGVVSYNQTALEKVFQEFPKETKV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHH
SIGNIFKKVIDSNNLDSIQFVGRHISDFSIYFASDRDMILRVLGSPKILEKLLQAGLDPN
HHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHCCCCCC
RIYGYKKSVFVNDRWIDGIEEDTFLILCLEDSKETSISSLQLLLKYGAKTDLAVKRYSRG
CCCCCCCEEEECCHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCC
KEYLYSPHAVLENPDYDFSLKRKIFTEWTKKKVK
CHHEECCCHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFFKFILSVLIILQLSCNTTSAIVYTFKGEEKIYPYSGAALAFERLIWQTCPPKPFSKSF
CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEECCCCCHHHHHHHHHHHCCCCCCCCHHH
WDVLVLIDLPFTLVFDTILLPVSFPYYLYVESGSPGSKSWYYKKWKEKLYTFIAKNSAND
HHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC
ILNLTLEERDSRFEYQELLKSISRLEERVLHLQKKGIALNKDLQYLISISSNGKIDPGLQ
EEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCH
LKQHVEIVGIIYEQFREHPELESSYDRNLWEKYFEIVWRNFFSKGFLIRNPDILKKILDE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHH
FSNKKDAAILFQEIASFYSEEEYDKQHFSYFVKSPSSQNSFESLETRSNLGFPIPKTNQE
HCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHH
FWKNQIQILLELDRMIRRDFTHLKNSLDPVWEEAISSGVVSYNQTALEKVFQEFPKETKV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHH
SIGNIFKKVIDSNNLDSIQFVGRHISDFSIYFASDRDMILRVLGSPKILEKLLQAGLDPN
HHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHCCCCCC
RIYGYKKSVFVNDRWIDGIEEDTFLILCLEDSKETSISSLQLLLKYGAKTDLAVKRYSRG
CCCCCCCEEEECCHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCC
KEYLYSPHAVLENPDYDFSLKRKIFTEWTKKKVK
CHHEECCCHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA