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The map label for this gene is 45658484

Identifier: 45658484

GI number: 45658484

Start: 3208872

End: 3209768

Strand: Reverse

Name: 45658484

Synonym: LIC12647

Alternate gene names: NA

Gene position: 3209768-3208872 (Counterclockwise)

Preceding gene: 45658485

Following gene: 45658483

Centisome position: 75.04

GC content: 35.23

Gene sequence:

>897_bases
GTGATTCTTACTTTAAGAAAAAACTTCATAGTATTTTTATTCATTATATTAGGAAATACAAATCCAATATTTCCAGATAA
AAAATCGGAAATTAAAGAAATTCCAATACCAGCGTCTATTCAAAGTGGGTCTACCGGAGAATTTGTAGATTCTGATATGA
TTTTTAAAAAATTAGAAAATTATGATGTTTTGATATTCGGGGAGGAGCATGATGACGTAGTGGGGCATAGAATTCGCCTG
TATTGGTTTCAGAAAATTGCTTTGAAAACTCCTGTAATTTTATCTTTGGAAATGTTGGAAAGGGATCAGCAAAAAACTTT
GGATGAATATTTGACAGGTCAGATCACGGAAACGGCTTATTTAAATTCTCTGACACTTTGGCCCAATTATATTCGGGATT
ATCATCCTTTTATTAAATTTGCAAAAGAACATAAAATTCCAGTGCTTGCGTCTAACGTTCCTAGAAAATACGTAAATTTA
GTAGCTTCTAATGGACTTGAAGCACTGTTTCGGATTCGTTCCGTGTTTTTACCTCCAAAATATTTGATCCGTAAATTTTC
CCAGGAAACTTATGAGATCAAAATCAAAAATACTCTCAGAAAACATCCTGGAGCAAGTTCGGAAAATAGATTTATAGACG
CTCAGTATCTTTGGGACGCAGGAATGGCGGACTCGATCGCGAACATTTTTTTGATGAAAAATAGAAAAGTGATTCATATT
AACGGTCGTTTTCATAGCGACGAGGGGCTCGGTGTCACCCATCGATTGAGAGAGTTAGGTTTGAAGATTCTTTCGATTTC
TATGTTTCCTTTGAAGGAAGGTGACGTAGTTCCGACCGAAATACTCAAGGGTTGTGATTTTACAGTGATTACGGAAAGGA
GAGAAAAAGAGAATTAA

Upstream 100 bases:

>100_bases
CTTGAAAAACATTTAGAATTTTGGTTCGGCAACAAAATAGAAGAATTTTAAAATGATACTACGTAAAATCTTTGTTTGGT
GATAGGCTAGAGGTGGTTCT

Downstream 100 bases:

>100_bases
ATTGCTTGTCTGGAATTCGTACATTTTCCGACAATTATGAAGATGATGGAGACTGGGATTCAGACTCTAAAAACGACTCG
ATTTTTATGTCCTGAATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MILTLRKNFIVFLFIILGNTNPIFPDKKSEIKEIPIPASIQSGSTGEFVDSDMIFKKLENYDVLIFGEEHDDVVGHRIRL
YWFQKIALKTPVILSLEMLERDQQKTLDEYLTGQITETAYLNSLTLWPNYIRDYHPFIKFAKEHKIPVLASNVPRKYVNL
VASNGLEALFRIRSVFLPPKYLIRKFSQETYEIKIKNTLRKHPGASSENRFIDAQYLWDAGMADSIANIFLMKNRKVIHI
NGRFHSDEGLGVTHRLRELGLKILSISMFPLKEGDVVPTEILKGCDFTVITERREKEN

Sequences:

>Translated_298_residues
MILTLRKNFIVFLFIILGNTNPIFPDKKSEIKEIPIPASIQSGSTGEFVDSDMIFKKLENYDVLIFGEEHDDVVGHRIRL
YWFQKIALKTPVILSLEMLERDQQKTLDEYLTGQITETAYLNSLTLWPNYIRDYHPFIKFAKEHKIPVLASNVPRKYVNL
VASNGLEALFRIRSVFLPPKYLIRKFSQETYEIKIKNTLRKHPGASSENRFIDAQYLWDAGMADSIANIFLMKNRKVIHI
NGRFHSDEGLGVTHRLRELGLKILSISMFPLKEGDVVPTEILKGCDFTVITERREKEN
>Mature_298_residues
MILTLRKNFIVFLFIILGNTNPIFPDKKSEIKEIPIPASIQSGSTGEFVDSDMIFKKLENYDVLIFGEEHDDVVGHRIRL
YWFQKIALKTPVILSLEMLERDQQKTLDEYLTGQITETAYLNSLTLWPNYIRDYHPFIKFAKEHKIPVLASNVPRKYVNL
VASNGLEALFRIRSVFLPPKYLIRKFSQETYEIKIKNTLRKHPGASSENRFIDAQYLWDAGMADSIANIFLMKNRKVIHI
NGRFHSDEGLGVTHRLRELGLKILSISMFPLKEGDVVPTEILKGCDFTVITERREKEN

Specific function: Unknown

COG id: COG3016

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34533; Mature: 34533

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTLRKNFIVFLFIILGNTNPIFPDKKSEIKEIPIPASIQSGSTGEFVDSDMIFKKLEN
CEEEEECHHEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC
YDVLIFGEEHDDVVGHRIRLYWFQKIALKTPVILSLEMLERDQQKTLDEYLTGQITETAY
CEEEEECCCCCCHHHCEEEEEEEHHHHHCCCCEEEHHHHHCHHHHHHHHHHCCCCCHHHH
LNSLTLWPNYIRDYHPFIKFAKEHKIPVLASNVPRKYVNLVASNGLEALFRIRSVFLPPK
HCEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCHH
YLIRKFSQETYEIKIKNTLRKHPGASSENRFIDAQYLWDAGMADSIANIFLMKNRKVIHI
HHHHHHCCCCEEEEEHHHHHHCCCCCCCCCEEEHHHHHCCCCHHHHHHEEEECCCEEEEE
NGRFHSDEGLGVTHRLRELGLKILSISMFPLKEGDVVPTEILKGCDFTVITERREKEN
CCEEECCCCCCHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MILTLRKNFIVFLFIILGNTNPIFPDKKSEIKEIPIPASIQSGSTGEFVDSDMIFKKLEN
CEEEEECHHEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC
YDVLIFGEEHDDVVGHRIRLYWFQKIALKTPVILSLEMLERDQQKTLDEYLTGQITETAY
CEEEEECCCCCCHHHCEEEEEEEHHHHHCCCCEEEHHHHHCHHHHHHHHHHCCCCCHHHH
LNSLTLWPNYIRDYHPFIKFAKEHKIPVLASNVPRKYVNLVASNGLEALFRIRSVFLPPK
HCEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCHH
YLIRKFSQETYEIKIKNTLRKHPGASSENRFIDAQYLWDAGMADSIANIFLMKNRKVIHI
HHHHHHCCCCEEEEEHHHHHHCCCCCCCCCEEEHHHHHCCCCHHHHHHEEEECCCEEEEE
NGRFHSDEGLGVTHRLRELGLKILSISMFPLKEGDVVPTEILKGCDFTVITERREKEN
CCEEECCCCCCHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA