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The map label for this gene is 45658479

Identifier: 45658479

GI number: 45658479

Start: 3201187

End: 3201645

Strand: Direct

Name: 45658479

Synonym: LIC12642

Alternate gene names: NA

Gene position: 3201187-3201645 (Clockwise)

Preceding gene: 45658478

Following gene: 45658480

Centisome position: 74.84

GC content: 42.48

Gene sequence:

>459_bases
GTGGGCGTCTTAAAGATGGAAGTTGTCGATGGGAAAGAGGATAACACTAAAGTATCCGATCTTCTCGGTGAACTTTATCC
AGACTCATGGACTGGAAGTATAAAATTCGAAGACAGTTATCTGCAAAAGACCTACTATCAATCCGTTTTTAATTACTACG
CAGGTTACGTCTATTTATTCGACCTCCAGGAAAAAAGGCTGTTTCCTTTTTTGAGACAATATCTTCGGGAAGGGGATCAA
ATCGGAAATCGAGTGGTCACTTCCTCCGGAACAAAATCGTTCCAAGGCAAACGGCTCCAAACCTTCGTCTTGAAGGATTT
AAACGAACCGATCGTGGAAGAATACATGGAATACACGGGTTTGTACTATTACAAAAACGGAAACTTGGAATATAAGTTGG
AAGCGGCGATGGTGCAAAACTGTTCCTATTACGTCGACTCTCCCGGCAGACCACGATAA

Upstream 100 bases:

>100_bases
CAAAACGGTACACGCCTATCAAGAACAAAAAAATAACTGTCTGTTTCCTGTAAAAGATGGAAATCTATGGCAATACCAAA
TCTATAAGGACGGCCAAAAG

Downstream 100 bases:

>100_bases
GGTCTTTAAAAAGATCTTACTACAAACGGAAATTTTTATTGCAAAACACTGTTTCAGTGCAAAAACTAGATACTTTATTA
GAGTTGTTGGAAAATTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MGVLKMEVVDGKEDNTKVSDLLGELYPDSWTGSIKFEDSYLQKTYYQSVFNYYAGYVYLFDLQEKRLFPFLRQYLREGDQ
IGNRVVTSSGTKSFQGKRLQTFVLKDLNEPIVEEYMEYTGLYYYKNGNLEYKLEAAMVQNCSYYVDSPGRPR

Sequences:

>Translated_152_residues
MGVLKMEVVDGKEDNTKVSDLLGELYPDSWTGSIKFEDSYLQKTYYQSVFNYYAGYVYLFDLQEKRLFPFLRQYLREGDQ
IGNRVVTSSGTKSFQGKRLQTFVLKDLNEPIVEEYMEYTGLYYYKNGNLEYKLEAAMVQNCSYYVDSPGRPR
>Mature_151_residues
GVLKMEVVDGKEDNTKVSDLLGELYPDSWTGSIKFEDSYLQKTYYQSVFNYYAGYVYLFDLQEKRLFPFLRQYLREGDQI
GNRVVTSSGTKSFQGKRLQTFVLKDLNEPIVEEYMEYTGLYYYKNGNLEYKLEAAMVQNCSYYVDSPGRPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17850; Mature: 17719

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLKMEVVDGKEDNTKVSDLLGELYPDSWTGSIKFEDSYLQKTYYQSVFNYYAGYVYLF
CCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHCCEEEEE
DLQEKRLFPFLRQYLREGDQIGNRVVTSSGTKSFQGKRLQTFVLKDLNEPIVEEYMEYTG
ECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC
LYYYKNGNLEYKLEAAMVQNCSYYVDSPGRPR
EEEEECCCEEEEEHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure 
GVLKMEVVDGKEDNTKVSDLLGELYPDSWTGSIKFEDSYLQKTYYQSVFNYYAGYVYLF
CEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHCCEEEEE
DLQEKRLFPFLRQYLREGDQIGNRVVTSSGTKSFQGKRLQTFVLKDLNEPIVEEYMEYTG
ECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC
LYYYKNGNLEYKLEAAMVQNCSYYVDSPGRPR
EEEEECCCEEEEEHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA