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The map label for this gene is 45658478

Identifier: 45658478

GI number: 45658478

Start: 3198856

End: 3201024

Strand: Direct

Name: 45658478

Synonym: LIC12641

Alternate gene names: NA

Gene position: 3198856-3201024 (Clockwise)

Preceding gene: 45658477

Following gene: 45658479

Centisome position: 74.79

GC content: 41.86

Gene sequence:

>2169_bases
ATGAAGTTTAGAAACCGCTTATTTTTGTCGCTGATGATCGTTGCTCTTTCGGGAATTCACTCCGAAAACGGTTATTTATA
TCTCGAAAATGGAATTTTAGATTATTCGAATATTCCCTCCTCTTCGCCTAAAACCGGAAACGAATCCAAAGGAAAAAAGT
CCGTATATTTTTCCAAAAAAGGTTTGAACTTTAAAATTCCTCTCTCCTACAACGTGGTTGAACGTCTGCGTATAGAAAAT
TCCGGCGAAAAAGAAGTTTCTATCAAAGTAAACTCAAAGGCGGAAAAAAATTTACTCTACGGTGTGACGGGAGAAGGAGG
AGATTCCTTTATCAAAATTCCTCCCGGAAACGTACTCTCTTTGCCCGTGCGATTTTTCGCTCAAGACACGTTACCCGGAA
CCTATTCCTTGGAAAATTCCATATCGGACGAACAGGGAAATATTTTAGACACGATCCGGGGAACGGTCGAGATTACCAAA
CCGGATTTTAAAATCGAAACGGAACTTCTGAAAAAAACTCCTCTCGTTCAACAGTTTCGTTTTAAAAACAAAGGGGACAC
ACTTGCGAATCTTTCCATCCGTTTAAAAAATTCGGATTCGCTACGAATGGAACCCTCCGTAGACCACTATCTATTTCCAA
AAGACGGATCCTTAGAAATTGCGGTTTATACTACGAACAGATTGGAAAAAAATCAAAGCGCGTCCTTTCATGTCTCCTCA
TCGGGGATCGAAAAAGAAGTTCCTTTTCTTTTCGAAGCTGCGTCTGCCGACTCCGTTGAAATGGTCAGCTTGGATCCGAT
CGTTCGTCTGAGAAATAAAGATTGGTACTGTACAAATCGACCGATCATCCATATGTCTTACACGGTTCCCTACTTCGAAA
AAAAGGAAGTTCAAAATTTAGGATTCACTTCTAAGTTTTCTTGGCTGACTTCGAAAGGAGAAGGTTCCGATACAAACGGA
AACGATAAAGCGGATCATTGGACTCTGACCGAAAAAGGGAACGTCATCATGGCGGGAGACGACTACGACGAAGACGGAGA
GATCGACTTTTTTCGGGAACAAGACAGCGAGAATCGCACTCTCAACCGAGCCTATTTCAAAAAAGACGGCAAATGGTTCG
AAACGAATATCGTGGATTTATATCTGATCAGTTCCTATCTTCCGTTTAACGACGGAGCAAACGTTCAACCCCACGATCTG
GAAGTTTTGATAAACGACGTATCCTTCGCTCAGGAAAAACAAATCATTCCGACGGGCTCCAGACTTCGTCGAATCCCCTT
ACATCGATTCAACGAAAATCAAATAAACGGTTATTCGGAAAACAGAATCACGGTACGAACGAGTCATCTGCCGGAAGCGA
ACTACCAGGTGAACGCGGAAAATACTCTTCTAATCTTTTATTCCACTATACAAATTCCGGTGGTCTCTCGGAAAAAATTG
GATCTGAACATAAAGACGATTTCGGAGAATATCGCTGAAGAGGAAAAAAAAGCCGCCGATGAACCGAATGAAGTAAAAAA
GGAAGCCTCTCTCAATCTATTGTCTAAACTCAAACAATTGAGAGATCAGAAACTCAAGGAAATCGAAAAATTCTTTCAGG
AACATTCGGAAGCGGATACTGCTTTAAAACTCACCGGGGTTCAGTACAGAGGGGCCGACTTGGCGGTGTACGGTTCCGAT
CTTTCGATCCAGGGAAACGGAATTTCCGGTAAGATCAGAAACATGGGCTACGAGTCTTTACCCTACACGGTTTCTCTCTT
CCAATCGTCCGAAAAAGGATATACGTTAGTCGAAACACAGGAAGGCAGGAACCTACCTCCCTTTGCCAAAAGGAACTTTC
GTTTTTCGATCAAAAATTTTTCGGACAAAAAACGTAAGATCTATAAAATCACGATTTCACCCAAGGATAAAAAAAAGGAA
GAGCTTGTGACGAGCAACAATCAGGCTCATTTAATCGTAGGAAAGGAAAATAACGCGGCTGAATTGAAAAAGGAAATGGT
GGCCTTAGCCTCGGAAATGGGTCTTACAAACGATCAGGTCACTCTCGTTTCCAAACCTGCCATTCCGGAATTCAGCTTGA
AAGAGTTAGAGAACGTAAAGATGAACCAAATCGAATTTCCCTGGCCGCAAAAACTCAAAAAAGAAGAACGAAAATTCATT
TTGGAATGA

Upstream 100 bases:

>100_bases
ACGACCTAAACCAAGCGGAACTCTTGGAACCCGAGTTTAAAAATCCCAAAATCGATCAACTTCGAAGTTTGATTGCAAGA
AGAAATCAAGGAAGAATCAG

Downstream 100 bases:

>100_bases
TTTTATGAAACTACATTCACTTTTACTCATATTATTTACGCTCCTATCGTTAACGATCCAAACAAAACGGTACACGCCTA
TCAAGAACAAAAAAATAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MKFRNRLFLSLMIVALSGIHSENGYLYLENGILDYSNIPSSSPKTGNESKGKKSVYFSKKGLNFKIPLSYNVVERLRIEN
SGEKEVSIKVNSKAEKNLLYGVTGEGGDSFIKIPPGNVLSLPVRFFAQDTLPGTYSLENSISDEQGNILDTIRGTVEITK
PDFKIETELLKKTPLVQQFRFKNKGDTLANLSIRLKNSDSLRMEPSVDHYLFPKDGSLEIAVYTTNRLEKNQSASFHVSS
SGIEKEVPFLFEAASADSVEMVSLDPIVRLRNKDWYCTNRPIIHMSYTVPYFEKKEVQNLGFTSKFSWLTSKGEGSDTNG
NDKADHWTLTEKGNVIMAGDDYDEDGEIDFFREQDSENRTLNRAYFKKDGKWFETNIVDLYLISSYLPFNDGANVQPHDL
EVLINDVSFAQEKQIIPTGSRLRRIPLHRFNENQINGYSENRITVRTSHLPEANYQVNAENTLLIFYSTIQIPVVSRKKL
DLNIKTISENIAEEEKKAADEPNEVKKEASLNLLSKLKQLRDQKLKEIEKFFQEHSEADTALKLTGVQYRGADLAVYGSD
LSIQGNGISGKIRNMGYESLPYTVSLFQSSEKGYTLVETQEGRNLPPFAKRNFRFSIKNFSDKKRKIYKITISPKDKKKE
ELVTSNNQAHLIVGKENNAAELKKEMVALASEMGLTNDQVTLVSKPAIPEFSLKELENVKMNQIEFPWPQKLKKEERKFI
LE

Sequences:

>Translated_722_residues
MKFRNRLFLSLMIVALSGIHSENGYLYLENGILDYSNIPSSSPKTGNESKGKKSVYFSKKGLNFKIPLSYNVVERLRIEN
SGEKEVSIKVNSKAEKNLLYGVTGEGGDSFIKIPPGNVLSLPVRFFAQDTLPGTYSLENSISDEQGNILDTIRGTVEITK
PDFKIETELLKKTPLVQQFRFKNKGDTLANLSIRLKNSDSLRMEPSVDHYLFPKDGSLEIAVYTTNRLEKNQSASFHVSS
SGIEKEVPFLFEAASADSVEMVSLDPIVRLRNKDWYCTNRPIIHMSYTVPYFEKKEVQNLGFTSKFSWLTSKGEGSDTNG
NDKADHWTLTEKGNVIMAGDDYDEDGEIDFFREQDSENRTLNRAYFKKDGKWFETNIVDLYLISSYLPFNDGANVQPHDL
EVLINDVSFAQEKQIIPTGSRLRRIPLHRFNENQINGYSENRITVRTSHLPEANYQVNAENTLLIFYSTIQIPVVSRKKL
DLNIKTISENIAEEEKKAADEPNEVKKEASLNLLSKLKQLRDQKLKEIEKFFQEHSEADTALKLTGVQYRGADLAVYGSD
LSIQGNGISGKIRNMGYESLPYTVSLFQSSEKGYTLVETQEGRNLPPFAKRNFRFSIKNFSDKKRKIYKITISPKDKKKE
ELVTSNNQAHLIVGKENNAAELKKEMVALASEMGLTNDQVTLVSKPAIPEFSLKELENVKMNQIEFPWPQKLKKEERKFI
LE
>Mature_722_residues
MKFRNRLFLSLMIVALSGIHSENGYLYLENGILDYSNIPSSSPKTGNESKGKKSVYFSKKGLNFKIPLSYNVVERLRIEN
SGEKEVSIKVNSKAEKNLLYGVTGEGGDSFIKIPPGNVLSLPVRFFAQDTLPGTYSLENSISDEQGNILDTIRGTVEITK
PDFKIETELLKKTPLVQQFRFKNKGDTLANLSIRLKNSDSLRMEPSVDHYLFPKDGSLEIAVYTTNRLEKNQSASFHVSS
SGIEKEVPFLFEAASADSVEMVSLDPIVRLRNKDWYCTNRPIIHMSYTVPYFEKKEVQNLGFTSKFSWLTSKGEGSDTNG
NDKADHWTLTEKGNVIMAGDDYDEDGEIDFFREQDSENRTLNRAYFKKDGKWFETNIVDLYLISSYLPFNDGANVQPHDL
EVLINDVSFAQEKQIIPTGSRLRRIPLHRFNENQINGYSENRITVRTSHLPEANYQVNAENTLLIFYSTIQIPVVSRKKL
DLNIKTISENIAEEEKKAADEPNEVKKEASLNLLSKLKQLRDQKLKEIEKFFQEHSEADTALKLTGVQYRGADLAVYGSD
LSIQGNGISGKIRNMGYESLPYTVSLFQSSEKGYTLVETQEGRNLPPFAKRNFRFSIKNFSDKKRKIYKITISPKDKKKE
ELVTSNNQAHLIVGKENNAAELKKEMVALASEMGLTNDQVTLVSKPAIPEFSLKELENVKMNQIEFPWPQKLKKEERKFI
LE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82112; Mature: 82112

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRNRLFLSLMIVALSGIHSENGYLYLENGILDYSNIPSSSPKTGNESKGKKSVYFSKK
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEEC
GLNFKIPLSYNVVERLRIENSGEKEVSIKVNSKAEKNLLYGVTGEGGDSFIKIPPGNVLS
CCCEEEECCHHHHHHHEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCEEE
LPVRFFAQDTLPGTYSLENSISDEQGNILDTIRGTVEITKPDFKIETELLKKTPLVQQFR
ECCEEEECCCCCCEEECCCCCCCCCCCEEEECCCEEEEECCCCEEHHHHHHCCCHHHHHH
FKNKGDTLANLSIRLKNSDSLRMEPSVDHYLFPKDGSLEIAVYTTNRLEKNQSASFHVSS
CCCCCCEEEEEEEEEECCCCEEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEEEC
SGIEKEVPFLFEAASADSVEMVSLDPIVRLRNKDWYCTNRPIIHMSYTVPYFEKKEVQNL
CCCCCCCCEEEEECCCCCEEEEECCCEEEECCCCEEECCCCEEEEEEECCCCCHHHHHHC
GFTSKFSWLTSKGEGSDTNGNDKADHWTLTEKGNVIMAGDDYDEDGEIDFFREQDSENRT
CCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCC
LNRAYFKKDGKWFETNIVDLYLISSYLPFNDGANVQPHDLEVLINDVSFAQEKQIIPTGS
HHHHHHHCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCH
RLRRIPLHRFNENQINGYSENRITVRTSHLPEANYQVNAENTLLIFYSTIQIPVVSRKKL
HHEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEEEEEEEEECCEEE
DLNIKTISENIAEEEKKAADEPNEVKKEASLNLLSKLKQLRDQKLKEIEKFFQEHSEADT
EEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALKLTGVQYRGADLAVYGSDLSIQGNGISGKIRNMGYESLPYTVSLFQSSEKGYTLVETQ
EEEEECEEECCCEEEEECCCEEEECCCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEC
EGRNLPPFAKRNFRFSIKNFSDKKRKIYKITISPKDKKKEELVTSNNQAHLIVGKENNAA
CCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCHHHHHCCCCCEEEEEECCCCHH
ELKKEMVALASEMGLTNDQVTLVSKPAIPEFSLKELENVKMNQIEFPWPQKLKKEERKFI
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCCCCCEECCCCHHHHHHHHHHHC
LE
CC
>Mature Secondary Structure
MKFRNRLFLSLMIVALSGIHSENGYLYLENGILDYSNIPSSSPKTGNESKGKKSVYFSKK
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEEC
GLNFKIPLSYNVVERLRIENSGEKEVSIKVNSKAEKNLLYGVTGEGGDSFIKIPPGNVLS
CCCEEEECCHHHHHHHEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCEEE
LPVRFFAQDTLPGTYSLENSISDEQGNILDTIRGTVEITKPDFKIETELLKKTPLVQQFR
ECCEEEECCCCCCEEECCCCCCCCCCCEEEECCCEEEEECCCCEEHHHHHHCCCHHHHHH
FKNKGDTLANLSIRLKNSDSLRMEPSVDHYLFPKDGSLEIAVYTTNRLEKNQSASFHVSS
CCCCCCEEEEEEEEEECCCCEEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEEEC
SGIEKEVPFLFEAASADSVEMVSLDPIVRLRNKDWYCTNRPIIHMSYTVPYFEKKEVQNL
CCCCCCCCEEEEECCCCCEEEEECCCEEEECCCCEEECCCCEEEEEEECCCCCHHHHHHC
GFTSKFSWLTSKGEGSDTNGNDKADHWTLTEKGNVIMAGDDYDEDGEIDFFREQDSENRT
CCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCC
LNRAYFKKDGKWFETNIVDLYLISSYLPFNDGANVQPHDLEVLINDVSFAQEKQIIPTGS
HHHHHHHCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCH
RLRRIPLHRFNENQINGYSENRITVRTSHLPEANYQVNAENTLLIFYSTIQIPVVSRKKL
HHEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEEEEEEEEECCEEE
DLNIKTISENIAEEEKKAADEPNEVKKEASLNLLSKLKQLRDQKLKEIEKFFQEHSEADT
EEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALKLTGVQYRGADLAVYGSDLSIQGNGISGKIRNMGYESLPYTVSLFQSSEKGYTLVETQ
EEEEECEEECCCEEEEECCCEEEECCCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEC
EGRNLPPFAKRNFRFSIKNFSDKKRKIYKITISPKDKKKEELVTSNNQAHLIVGKENNAA
CCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCHHHHHCCCCCEEEEEECCCCHH
ELKKEMVALASEMGLTNDQVTLVSKPAIPEFSLKELENVKMNQIEFPWPQKLKKEERKFI
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCCCCCEECCCCHHHHHHHHHHHC
LE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA