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The map label for this gene is 45658477

Identifier: 45658477

GI number: 45658477

Start: 3198026

End: 3198859

Strand: Direct

Name: 45658477

Synonym: LIC12640

Alternate gene names: NA

Gene position: 3198026-3198859 (Clockwise)

Preceding gene: 45658476

Following gene: 45658478

Centisome position: 74.77

GC content: 41.49

Gene sequence:

>834_bases
ATGCACGTACTCGCACGTTACAACAAAATCTTTGATCTAAAAATTTTAGTCAGTAAAATCGCATTTTATTTCCTTTTAAG
TCCGGCCTTTCTCCTAACAAATCGGGCCCTGTTTACGGAACCGGCAACCGAAGACGCGCTCGAAACGGGACGTTATGCGG
AAGCGGCCTCTAAATATACGAACTTATGTGGGAAAGGCTGCGGAAACACAGATGTGAAAGAATTAGTTTCTTCCTTCGAA
ACGGAAAATGTAGGCGATCACTGCAACCGTCTTGGGGTGGCATACATGGGTTTGAAGAACTTTAAAGCGGCAATTCGCTC
CTTCCAACTTGCTGTATCCTGCAAAGATTCCTCTAAATTCCATTCCAATTTGGCCCTGGCATTTTCCTACGACCACAATT
CCAAGTTAGCCGAAATTCATTATGAAAAATCGATGAGCCTTGCGGGAAACGATCCGGGGAGTTTTTCGGCGATGCTCAAT
TATTCCATTTTTCTAATTAAGAAAAAGGATTTTTCCAAAGCGGAAGAACTTCTACAGGAGGTCATCCATCATAAAGTTCA
TCTTTTTTACGCAAGATTGTATCTGGGATATTCCTTTTATCAAAGAAAAAAGTTCGAAGAAGCTTTGTCCCAATTCGATC
AAGGCATCCAAGAAAATCAGAAATACCCGGATCTTTATCTGTATCGCGCTTACTCCAAATATCAATTGAACAATTTAGCG
GGCGCGGAGTACGACCTAAACCAAGCGGAACTCTTGGAACCCGAGTTTAAAAATCCCAAAATCGATCAACTTCGAAGTTT
GATTGCAAGAAGAAATCAAGGAAGAATCAGATGA

Upstream 100 bases:

>100_bases
CTTAGACCATCAACTCAAAATAAAAACGACCGAAAAAAGAGTAATCTTTGGAAAAAGATCGTATTCCATTCATTGTGGAG
ATTAATTTACGCAAACAATT

Downstream 100 bases:

>100_bases
AGTTTAGAAACCGCTTATTTTTGTCGCTGATGATCGTTGCTCTTTCGGGAATTCACTCCGAAAACGGTTATTTATATCTC
GAAAATGGAATTTTAGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MHVLARYNKIFDLKILVSKIAFYFLLSPAFLLTNRALFTEPATEDALETGRYAEAASKYTNLCGKGCGNTDVKELVSSFE
TENVGDHCNRLGVAYMGLKNFKAAIRSFQLAVSCKDSSKFHSNLALAFSYDHNSKLAEIHYEKSMSLAGNDPGSFSAMLN
YSIFLIKKKDFSKAEELLQEVIHHKVHLFYARLYLGYSFYQRKKFEEALSQFDQGIQENQKYPDLYLYRAYSKYQLNNLA
GAEYDLNQAELLEPEFKNPKIDQLRSLIARRNQGRIR

Sequences:

>Translated_277_residues
MHVLARYNKIFDLKILVSKIAFYFLLSPAFLLTNRALFTEPATEDALETGRYAEAASKYTNLCGKGCGNTDVKELVSSFE
TENVGDHCNRLGVAYMGLKNFKAAIRSFQLAVSCKDSSKFHSNLALAFSYDHNSKLAEIHYEKSMSLAGNDPGSFSAMLN
YSIFLIKKKDFSKAEELLQEVIHHKVHLFYARLYLGYSFYQRKKFEEALSQFDQGIQENQKYPDLYLYRAYSKYQLNNLA
GAEYDLNQAELLEPEFKNPKIDQLRSLIARRNQGRIR
>Mature_277_residues
MHVLARYNKIFDLKILVSKIAFYFLLSPAFLLTNRALFTEPATEDALETGRYAEAASKYTNLCGKGCGNTDVKELVSSFE
TENVGDHCNRLGVAYMGLKNFKAAIRSFQLAVSCKDSSKFHSNLALAFSYDHNSKLAEIHYEKSMSLAGNDPGSFSAMLN
YSIFLIKKKDFSKAEELLQEVIHHKVHLFYARLYLGYSFYQRKKFEEALSQFDQGIQENQKYPDLYLYRAYSKYQLNNLA
GAEYDLNQAELLEPEFKNPKIDQLRSLIARRNQGRIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31808; Mature: 31808

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVLARYNKIFDLKILVSKIAFYFLLSPAFLLTNRALFTEPATEDALETGRYAEAASKYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHCHHHHHHHHHH
NLCGKGCGNTDVKELVSSFETENVGDHCNRLGVAYMGLKNFKAAIRSFQLAVSCKDSSKF
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHH
HSNLALAFSYDHNSKLAEIHYEKSMSLAGNDPGSFSAMLNYSIFLIKKKDFSKAEELLQE
HCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEEECCCHHHHHHHHHH
VIHHKVHLFYARLYLGYSFYQRKKFEEALSQFDQGIQENQKYPDLYLYRAYSKYQLNNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCC
GAEYDLNQAELLEPEFKNPKIDQLRSLIARRNQGRIR
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHVLARYNKIFDLKILVSKIAFYFLLSPAFLLTNRALFTEPATEDALETGRYAEAASKYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHCHHHHHHHHHH
NLCGKGCGNTDVKELVSSFETENVGDHCNRLGVAYMGLKNFKAAIRSFQLAVSCKDSSKF
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHH
HSNLALAFSYDHNSKLAEIHYEKSMSLAGNDPGSFSAMLNYSIFLIKKKDFSKAEELLQE
HCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEEECCCHHHHHHHHHH
VIHHKVHLFYARLYLGYSFYQRKKFEEALSQFDQGIQENQKYPDLYLYRAYSKYQLNNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCC
GAEYDLNQAELLEPEFKNPKIDQLRSLIARRNQGRIR
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA