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The map label for this gene is 45658458

Identifier: 45658458

GI number: 45658458

Start: 3172266

End: 3172676

Strand: Direct

Name: 45658458

Synonym: LIC12621

Alternate gene names: NA

Gene position: 3172266-3172676 (Clockwise)

Preceding gene: 45658457

Following gene: 45658459

Centisome position: 74.17

GC content: 44.04

Gene sequence:

>411_bases
ATGGCCATCGGCAGGGAAAATAATAACAGCGTAATCGGTCCAGGGTCCATATTCGAAGGGAAATTTTATATCGCGGGTTC
TCTTCGTATCGACGGTAAATTCGAAGGAGAGATCAAAACGGACGATACTCTTTATATCGGAGAAACTGGTAAAGTAAGAA
CCAATATCTCGGCCAGAGAAGTGACCGTTTCCGGAACCATGATCGGAAACATCAAAGCCGAAAACGAAGTTCGTCTGGAA
GAAACCGGAAGACTTTTAGGAGACATCATCGCACCTGCCCTTCATCTTGCTAAAGGAGTGGTTGCCAAAGGAAACATAAC
GATCACTGGCGGACAAAAGAAAGACGTAAAAAAAATCGTAGAAGAATCTTTTGGCGGAACCAGAACCTTAGACAACGGAA
AGGACGAATAA

Upstream 100 bases:

>100_bases
TGAGAACAAAAATACTTGTCGTTTTGGGATTGAGTACACAAATAGATTTACGGCATGTCCCAAACCAAGGGACAGTTTCG
ATTGTTAGCAGGAGTTTTAG

Downstream 100 bases:

>100_bases
AGCTCTCTCTCTCCTCCATTAGGAAAGGGCAAAAAGCGGCCGATATTCTTTCTATATGATCTTCAAAAAGCCCAGACAAC
TGACCGCAGGAAAAGAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAIGRENNNSVIGPGSIFEGKFYIAGSLRIDGKFEGEIKTDDTLYIGETGKVRTNISAREVTVSGTMIGNIKAENEVRLE
ETGRLLGDIIAPALHLAKGVVAKGNITITGGQKKDVKKIVEESFGGTRTLDNGKDE

Sequences:

>Translated_136_residues
MAIGRENNNSVIGPGSIFEGKFYIAGSLRIDGKFEGEIKTDDTLYIGETGKVRTNISAREVTVSGTMIGNIKAENEVRLE
ETGRLLGDIIAPALHLAKGVVAKGNITITGGQKKDVKKIVEESFGGTRTLDNGKDE
>Mature_135_residues
AIGRENNNSVIGPGSIFEGKFYIAGSLRIDGKFEGEIKTDDTLYIGETGKVRTNISAREVTVSGTMIGNIKAENEVRLEE
TGRLLGDIIAPALHLAKGVVAKGNITITGGQKKDVKKIVEESFGGTRTLDNGKDE

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14523; Mature: 14391

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGRENNNSVIGPGSIFEGKFYIAGSLRIDGKFEGEIKTDDTLYIGETGKVRTNISARE
CCCCCCCCCCEECCCCEECCEEEEEEEEEECCEECCEEECCCEEEECCCCCEEECCCEEE
VTVSGTMIGNIKAENEVRLEETGRLLGDIIAPALHLAKGVVAKGNITITGGQKKDVKKIV
EEECCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCHHHHHHHH
EESFGGTRTLDNGKDE
HHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AIGRENNNSVIGPGSIFEGKFYIAGSLRIDGKFEGEIKTDDTLYIGETGKVRTNISARE
CCCCCCCCCEECCCCEECCEEEEEEEEEECCEECCEEECCCEEEECCCCCEEECCCEEE
VTVSGTMIGNIKAENEVRLEETGRLLGDIIAPALHLAKGVVAKGNITITGGQKKDVKKIV
EEECCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCHHHHHHHH
EESFGGTRTLDNGKDE
HHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA