Click here to switch to the map view.

The map label for this gene is 45658456

Identifier: 45658456

GI number: 45658456

Start: 3168598

End: 3169674

Strand: Direct

Name: 45658456

Synonym: LIC12619

Alternate gene names: NA

Gene position: 3168598-3169674 (Clockwise)

Preceding gene: 45658436

Following gene: 45658457

Centisome position: 74.08

GC content: 37.98

Gene sequence:

>1077_bases
ATGGCTGGTAAAATCACTCATCTAGAAGTACTTTCTCAGATTTGTAAACATCTGGATCACGGAACTGCGGACCAAAGAAA
AATCGCAGTTCTGATGCGAGCAGAATCCAATCGAAAGTTTGCAAACATAGGAGCCATCGCCCCAGATATATTTTATTTTT
ATCATATATTTTCTCCTCACAAAACCAAAAAGGCTACCAGATGGGGAGACATGAGTCATCACAATTCAGTCGCAGAACTT
GTACTGAGTTTTTTGGATCTCATTCTACAGACAGAAGAAGGAATTCATAGAGATCGTTATATCGCGTTTACATTGGGTTA
TATTTGTCATTGTGTCGTGGACATAGTCACTCATCCGTATATCTTTTATATCTCCGGAGACTTTTACAATAAGGACAAAA
AAATCAGCAGCCTCGCACAATACAATCATATGAGAGTGGAAAATGCACTGGATTCTTGGTTGTTAGACTATAGATGGGGA
ATGACTCCAAAAGAATACGACTTTGTACATCACGTAGACGCCATCTTTAAATCCGAAAAAAAAATCTGGAAGATGGACCC
TATGCTCTGGCATTTCTGGCTCCGCGGACTTAAATCCACTTTTTCCGAAGAATTCAAAAAATATTATATAGGTTCGGAAG
ATAAAATTATTCCGGGAGATTTGTTAAACGAATCCTTTTTAGGTTATTTAGAATTCCATAAGCTTATGGATTCTAGAAGT
AGATGGGTGCGAGGAACTCTAAAATTTCTAGATCAAATAACGTTTCATAAAGTTAGGTCTTCGGTACTAATGCTTCCTCT
CAAAGAACATATAGACAAACGGATCATGAACGAAGAAAAAAAGAAATGGAACTATCCGGCAGATCCATCGATCGTAAGAG
AAGATTCCTTTGTAGAACTAATCAACAGTTCCGCACAAAACGGCAAAGAAGCTCTGACCCACGCCTGGAATTATTTAGAA
AACAAAATGAGCCGATCCGCATTTTTAAAAGAATACCAAGGATATAACTTGGACACGGGACTCCGATTTCAAGGAGTAGA
CAGTATGAAAGAATTTTCACCGTTGGAAGAAGTTTAA

Upstream 100 bases:

>100_bases
ATTTTAATTTTTCTATTGATTGCATAGTGAAACGTACAATTCTAAATGGTTTTAGAACACGCTCCTAAAGAGTTCCGTTT
TTTAAAAGGCATTTTCAGTC

Downstream 100 bases:

>100_bases
TCAAACATGAAACAAGAACCAGTCAGCTATCTTTTCCGTTTTTTCGTCATTCATTTCCGGGATAAAATTCTATCTAGAGT
TTTCAATTCAGAAAACCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAGKITHLEVLSQICKHLDHGTADQRKIAVLMRAESNRKFANIGAIAPDIFYFYHIFSPHKTKKATRWGDMSHHNSVAEL
VLSFLDLILQTEEGIHRDRYIAFTLGYICHCVVDIVTHPYIFYISGDFYNKDKKISSLAQYNHMRVENALDSWLLDYRWG
MTPKEYDFVHHVDAIFKSEKKIWKMDPMLWHFWLRGLKSTFSEEFKKYYIGSEDKIIPGDLLNESFLGYLEFHKLMDSRS
RWVRGTLKFLDQITFHKVRSSVLMLPLKEHIDKRIMNEEKKKWNYPADPSIVREDSFVELINSSAQNGKEALTHAWNYLE
NKMSRSAFLKEYQGYNLDTGLRFQGVDSMKEFSPLEEV

Sequences:

>Translated_358_residues
MAGKITHLEVLSQICKHLDHGTADQRKIAVLMRAESNRKFANIGAIAPDIFYFYHIFSPHKTKKATRWGDMSHHNSVAEL
VLSFLDLILQTEEGIHRDRYIAFTLGYICHCVVDIVTHPYIFYISGDFYNKDKKISSLAQYNHMRVENALDSWLLDYRWG
MTPKEYDFVHHVDAIFKSEKKIWKMDPMLWHFWLRGLKSTFSEEFKKYYIGSEDKIIPGDLLNESFLGYLEFHKLMDSRS
RWVRGTLKFLDQITFHKVRSSVLMLPLKEHIDKRIMNEEKKKWNYPADPSIVREDSFVELINSSAQNGKEALTHAWNYLE
NKMSRSAFLKEYQGYNLDTGLRFQGVDSMKEFSPLEEV
>Mature_357_residues
AGKITHLEVLSQICKHLDHGTADQRKIAVLMRAESNRKFANIGAIAPDIFYFYHIFSPHKTKKATRWGDMSHHNSVAELV
LSFLDLILQTEEGIHRDRYIAFTLGYICHCVVDIVTHPYIFYISGDFYNKDKKISSLAQYNHMRVENALDSWLLDYRWGM
TPKEYDFVHHVDAIFKSEKKIWKMDPMLWHFWLRGLKSTFSEEFKKYYIGSEDKIIPGDLLNESFLGYLEFHKLMDSRSR
WVRGTLKFLDQITFHKVRSSVLMLPLKEHIDKRIMNEEKKKWNYPADPSIVREDSFVELINSSAQNGKEALTHAWNYLEN
KMSRSAFLKEYQGYNLDTGLRFQGVDSMKEFSPLEEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42156; Mature: 42025

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKITHLEVLSQICKHLDHGTADQRKIAVLMRAESNRKFANIGAIAPDIFYFYHIFSPH
CCCCHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCHHCCCHHHHHHHHHHHHCCC
KTKKATRWGDMSHHNSVAELVLSFLDLILQTEEGIHRDRYIAFTLGYICHCVVDIVTHPY
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCE
IFYISGDFYNKDKKISSLAQYNHMRVENALDSWLLDYRWGMTPKEYDFVHHVDAIFKSEK
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KIWKMDPMLWHFWLRGLKSTFSEEFKKYYIGSEDKIIPGDLLNESFLGYLEFHKLMDSRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RWVRGTLKFLDQITFHKVRSSVLMLPLKEHIDKRIMNEEKKKWNYPADPSIVREDSFVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
INSSAQNGKEALTHAWNYLENKMSRSAFLKEYQGYNLDTGLRFQGVDSMKEFSPLEEV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCHHCC
>Mature Secondary Structure 
AGKITHLEVLSQICKHLDHGTADQRKIAVLMRAESNRKFANIGAIAPDIFYFYHIFSPH
CCCHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCHHCCCHHHHHHHHHHHHCCC
KTKKATRWGDMSHHNSVAELVLSFLDLILQTEEGIHRDRYIAFTLGYICHCVVDIVTHPY
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCE
IFYISGDFYNKDKKISSLAQYNHMRVENALDSWLLDYRWGMTPKEYDFVHHVDAIFKSEK
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KIWKMDPMLWHFWLRGLKSTFSEEFKKYYIGSEDKIIPGDLLNESFLGYLEFHKLMDSRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RWVRGTLKFLDQITFHKVRSSVLMLPLKEHIDKRIMNEEKKKWNYPADPSIVREDSFVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
INSSAQNGKEALTHAWNYLENKMSRSAFLKEYQGYNLDTGLRFQGVDSMKEFSPLEEV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA