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The map label for this gene is acd3

Identifier: 45658392

GI number: 45658392

Start: 3089357

End: 3091057

Strand: Direct

Name: acd3

Synonym: LIC12551

Alternate gene names: NA

Gene position: 3089357-3091057 (Clockwise)

Preceding gene: 45658391

Following gene: 45658393

Centisome position: 72.23

GC content: 35.39

Gene sequence:

>1701_bases
ATGGATCTATTGAACCCTAAAAAAACCGAATTTAAACATCTGGACGAAAAATCTAGAAACATCATGAAACGTACCATTGC
CTTTTTTGAAAAGAAAGGAAAGAATAAACTAAAAGAAGACGACAGAAATCAAACCTGGTATGCGGACTTTTTAGAATTTC
AAAAGAGCGAAAAAATTTTCGCCACTTTAATGACTCCTTCCGGTTACGGCGAAAATGATTCTAGATGGGATACAACTCGA
ATCTGCGACTTTAACGAAATCGCTGGTTTTTACGGTCTTTGTTATTGGTATACTTGGCAGGTTTCTATGTTAGGACTTGG
TCCAATCTGGAACAGTAAAAATGAAGAGATCAAACACAAAACCGCAAAACTATTGTTAGATGGTGAAATATTCGCTTTTG
GTCTTTCCGAAAAAGAACACGGTGCAGATTTAATTTCTAGCGATATGTCCTTAGAAAATAAAGGTAACGGCAACTACATC
GCCAACGGAAGAAAATACTATATCGGAAATTCAAATAAGGCCGCGATCGTATCCACTTTCGGTAAGATGAAGGATACCGG
AAATTACGTTTTTTTTGCGGTCAACTCCGGTCATAAAAACTACGAACTGATTCAGAACGTAGTCAACTCTCAGAGTTACG
TAGGAGAATATGCTCTAAAAGATTATCCTATTTCCGAAAAGGAAATCCTTTCTAAAGACAGAGAAGCTTGGGATGCGTCT
CTCAGTACAATCGCAGTTTGTAAATACAATCTAGGTTGGGCTTCTATTGGGATTTGTACTCATTCTTTTTACGAAGCTCT
CAATCACGCTTCCAAAAGAAAATTATTTAATCGTAATGTAACAGATTTTTCTCAAATCAAACAGATGTTTGTGGATGCCT
ATTGTAGACTTTTTTCCATGAAACTTTTTGCGGCAAGGGCTAAGGATTATATGAGATCTGCCTCTGCAACAGACAGACGT
TATCTTTTATTCAATCCAATGGTAAAGATGAAAGTTACCATGCAAGGCGAAGAAGTGATCAATCTTCTTTGGGACGTTAT
CGCTGCTAAAGGTTTTGAAAAAAATATGTATTTTGAAATGGCGGCCAAGGATATTCGAGGACTTCCAAAATTGGAAGGTA
CTGCACACGTAAACATGGCTTTAATCATCAAGTTCATGAATAATTATTTTTTCGAACCAAATTCTTCCCTTCCGGTTGTT
CCTAAAATCGACGATTTTAAAAACGATGATTTTCTTTTTAATCAGGGAACTACTTCTAAAGGTTTTGAAAAAATTACATT
CAGAGATTATAATGAAGTGTATTCAAACATAGATCTTCCAAACGTTCAAATTTTCAGAAAACAAATTGCGGTTTTAAAAG
AATTCTTAAAATCCACTCCTCCCGATTCTAAACAATCTAAAGATTTAGACTTTATGCTAATTCTTGGAGAATTGTTTACG
TTAGTCGCTTATGGTCAGCTTTTAATTGAAAATGCTGCCATTGAAAAAGTAGATAACGATCTTTTAGATCAAATTTTCGA
TTTTATGGTGCGCGATTGTTCCAAATACGCTCTTCAACTTTATTCCAAAAGAAGCAGCACAAAAGAACAAATGGAAAAAT
GTCTGGCTATGATTTTTAAACCCGCTGAAAACGAAGAACTTTTTAATCGTGTTTGTGCAAAGGTTTACTCTTATAAGGAC
GCTTATGAAATGGCTCCTTAA

Upstream 100 bases:

>100_bases
TTTTGAAATTGTTGATAGAATTCTTTTAATCTTTTTTAAATATTTTTCTATCTTGGAAAAACTGCAAGTTGAAACACTAT
CTACTTTAGGATGAACGACT

Downstream 100 bases:

>100_bases
ACTTCGTTCGTTTTTGTATGTATGATTATTTTTTTATAATATAAGGGTTTTATTTTATGTTGAAGTTCAACTAAAAAAAA
CCGAAATCTTCCATTTTTGA

Product: acyl-CoA dehydrogenase

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like Protein; Glutaryl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase FadE; Short-Chain Specific Acyl-Coa Dehydrogenase; Isovaleryl-CoA Dehydrogenase

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MDLLNPKKTEFKHLDEKSRNIMKRTIAFFEKKGKNKLKEDDRNQTWYADFLEFQKSEKIFATLMTPSGYGENDSRWDTTR
ICDFNEIAGFYGLCYWYTWQVSMLGLGPIWNSKNEEIKHKTAKLLLDGEIFAFGLSEKEHGADLISSDMSLENKGNGNYI
ANGRKYYIGNSNKAAIVSTFGKMKDTGNYVFFAVNSGHKNYELIQNVVNSQSYVGEYALKDYPISEKEILSKDREAWDAS
LSTIAVCKYNLGWASIGICTHSFYEALNHASKRKLFNRNVTDFSQIKQMFVDAYCRLFSMKLFAARAKDYMRSASATDRR
YLLFNPMVKMKVTMQGEEVINLLWDVIAAKGFEKNMYFEMAAKDIRGLPKLEGTAHVNMALIIKFMNNYFFEPNSSLPVV
PKIDDFKNDDFLFNQGTTSKGFEKITFRDYNEVYSNIDLPNVQIFRKQIAVLKEFLKSTPPDSKQSKDLDFMLILGELFT
LVAYGQLLIENAAIEKVDNDLLDQIFDFMVRDCSKYALQLYSKRSSTKEQMEKCLAMIFKPAENEELFNRVCAKVYSYKD
AYEMAP

Sequences:

>Translated_566_residues
MDLLNPKKTEFKHLDEKSRNIMKRTIAFFEKKGKNKLKEDDRNQTWYADFLEFQKSEKIFATLMTPSGYGENDSRWDTTR
ICDFNEIAGFYGLCYWYTWQVSMLGLGPIWNSKNEEIKHKTAKLLLDGEIFAFGLSEKEHGADLISSDMSLENKGNGNYI
ANGRKYYIGNSNKAAIVSTFGKMKDTGNYVFFAVNSGHKNYELIQNVVNSQSYVGEYALKDYPISEKEILSKDREAWDAS
LSTIAVCKYNLGWASIGICTHSFYEALNHASKRKLFNRNVTDFSQIKQMFVDAYCRLFSMKLFAARAKDYMRSASATDRR
YLLFNPMVKMKVTMQGEEVINLLWDVIAAKGFEKNMYFEMAAKDIRGLPKLEGTAHVNMALIIKFMNNYFFEPNSSLPVV
PKIDDFKNDDFLFNQGTTSKGFEKITFRDYNEVYSNIDLPNVQIFRKQIAVLKEFLKSTPPDSKQSKDLDFMLILGELFT
LVAYGQLLIENAAIEKVDNDLLDQIFDFMVRDCSKYALQLYSKRSSTKEQMEKCLAMIFKPAENEELFNRVCAKVYSYKD
AYEMAP
>Mature_566_residues
MDLLNPKKTEFKHLDEKSRNIMKRTIAFFEKKGKNKLKEDDRNQTWYADFLEFQKSEKIFATLMTPSGYGENDSRWDTTR
ICDFNEIAGFYGLCYWYTWQVSMLGLGPIWNSKNEEIKHKTAKLLLDGEIFAFGLSEKEHGADLISSDMSLENKGNGNYI
ANGRKYYIGNSNKAAIVSTFGKMKDTGNYVFFAVNSGHKNYELIQNVVNSQSYVGEYALKDYPISEKEILSKDREAWDAS
LSTIAVCKYNLGWASIGICTHSFYEALNHASKRKLFNRNVTDFSQIKQMFVDAYCRLFSMKLFAARAKDYMRSASATDRR
YLLFNPMVKMKVTMQGEEVINLLWDVIAAKGFEKNMYFEMAAKDIRGLPKLEGTAHVNMALIIKFMNNYFFEPNSSLPVV
PKIDDFKNDDFLFNQGTTSKGFEKITFRDYNEVYSNIDLPNVQIFRKQIAVLKEFLKSTPPDSKQSKDLDFMLILGELFT
LVAYGQLLIENAAIEKVDNDLLDQIFDFMVRDCSKYALQLYSKRSSTKEQMEKCLAMIFKPAENEELFNRVCAKVYSYKD
AYEMAP

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.3

Molecular weight: Translated: 65366; Mature: 65366

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLNPKKTEFKHLDEKSRNIMKRTIAFFEKKGKNKLKEDDRNQTWYADFLEFQKSEKIF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEE
ATLMTPSGYGENDSRWDTTRICDFNEIAGFYGLCYWYTWQVSMLGLGPIWNSKNEEIKHK
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEHEEEECCCCCCCCCHHHHHH
TAKLLLDGEIFAFGLSEKEHGADLISSDMSLENKGNGNYIANGRKYYIGNSNKAAIVSTF
HHHHEECCCEEEEECCCCHHCHHHHHCCCCCCCCCCCCEEECCEEEEECCCCCEEHHHHH
GKMKDTGNYVFFAVNSGHKNYELIQNVVNSQSYVGEYALKDYPISEKEILSKDREAWDAS
HHHCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
LSTIAVCKYNLGWASIGICTHSFYEALNHASKRKLFNRNVTDFSQIKQMFVDAYCRLFSM
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
KLFAARAKDYMRSASATDRRYLLFNPMVKMKVTMQGEEVINLLWDVIAAKGFEKNMYFEM
HHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHH
AAKDIRGLPKLEGTAHVNMALIIKFMNNYFFEPNSSLPVVPKIDDFKNDDFLFNQGTTSK
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
GFEKITFRDYNEVYSNIDLPNVQIFRKQIAVLKEFLKSTPPDSKQSKDLDFMLILGELFT
CCEEEHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LVAYGQLLIENAAIEKVDNDLLDQIFDFMVRDCSKYALQLYSKRSSTKEQMEKCLAMIFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
PAENEELFNRVCAKVYSYKDAYEMAP
CCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLLNPKKTEFKHLDEKSRNIMKRTIAFFEKKGKNKLKEDDRNQTWYADFLEFQKSEKIF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEE
ATLMTPSGYGENDSRWDTTRICDFNEIAGFYGLCYWYTWQVSMLGLGPIWNSKNEEIKHK
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEHEEEECCCCCCCCCHHHHHH
TAKLLLDGEIFAFGLSEKEHGADLISSDMSLENKGNGNYIANGRKYYIGNSNKAAIVSTF
HHHHEECCCEEEEECCCCHHCHHHHHCCCCCCCCCCCCEEECCEEEEECCCCCEEHHHHH
GKMKDTGNYVFFAVNSGHKNYELIQNVVNSQSYVGEYALKDYPISEKEILSKDREAWDAS
HHHCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
LSTIAVCKYNLGWASIGICTHSFYEALNHASKRKLFNRNVTDFSQIKQMFVDAYCRLFSM
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
KLFAARAKDYMRSASATDRRYLLFNPMVKMKVTMQGEEVINLLWDVIAAKGFEKNMYFEM
HHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHH
AAKDIRGLPKLEGTAHVNMALIIKFMNNYFFEPNSSLPVVPKIDDFKNDDFLFNQGTTSK
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
GFEKITFRDYNEVYSNIDLPNVQIFRKQIAVLKEFLKSTPPDSKQSKDLDFMLILGELFT
CCEEEHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LVAYGQLLIENAAIEKVDNDLLDQIFDFMVRDCSKYALQLYSKRSSTKEQMEKCLAMIFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
PAENEELFNRVCAKVYSYKDAYEMAP
CCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA