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The map label for this gene is yajC

Identifier: 45658382

GI number: 45658382

Start: 3079391

End: 3079717

Strand: Reverse

Name: yajC

Synonym: LIC12540

Alternate gene names: 45658382

Gene position: 3079717-3079391 (Counterclockwise)

Preceding gene: 45658383

Following gene: 45658381

Centisome position: 72.0

GC content: 38.53

Gene sequence:

>327_bases
ATGACATTTGATATTTTACTACAATTGGCTCAGGCCGCCGGAGAAGGAGACAAATCTCCTTTTTCTACTTTGCTTCTCAT
TCCAATTATGCTCGTGATCATGTATTTCCTGGTCATTCGTCCTCAAAGGAACGAAGAAAAAAAACGTAAGGAAATGATAG
ATAGTTTGAAAAAAGGAGACGAGGTAGTCACTTCTTCTGGAATTCACGGAAAGGTTGTAGAGATCAAAGACAATAACGAA
GTAGTTGTTCTGAATATCGCTAAAGATACCAACGTATCCTTTACCGCGAGTACGGTTCTAAAAAAGAAACAACAAGCGGA
CAAATGA

Upstream 100 bases:

>100_bases
GGAAAAACAAAAAAGTATTTCGAAGATTTAATTTCCAAAGAGTAAACGAGAAAAATACTGGTAAGAATTTGACGAAAAGA
ACCGAACAGGAAAGTAAACG

Downstream 100 bases:

>100_bases
AAAAAATTTCGATCTTAATTCTAATCTTTTTATTTTTAGGGAATTTGGCGCTATTCTCTCAGGATGGGGAAGAGATCGAC
TTTTTAGAAAAGGTCACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTFDILLQLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIDSLKKGDEVVTSSGIHGKVVEIKDNNE
VVVLNIAKDTNVSFTASTVLKKKQQADK

Sequences:

>Translated_108_residues
MTFDILLQLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIDSLKKGDEVVTSSGIHGKVVEIKDNNE
VVVLNIAKDTNVSFTASTVLKKKQQADK
>Mature_107_residues
TFDILLQLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIDSLKKGDEVVTSSGIHGKVVEIKDNNEV
VVLNIAKDTNVSFTASTVLKKKQQADK

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=83, Percent_Identity=33.7349397590361, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12060; Mature: 11929

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDILLQLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIDSLKKGD
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
EVVTSSGIHGKVVEIKDNNEVVVLNIAKDTNVSFTASTVLKKKQQADK
CEEECCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFDILLQLAQAAGEGDKSPFSTLLLIPIMLVIMYFLVIRPQRNEEKKRKEMIDSLKKGD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
EVVTSSGIHGKVVEIKDNNEVVVLNIAKDTNVSFTASTVLKKKQQADK
CEEECCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]