Click here to switch to the map view.

The map label for this gene is 45658381

Identifier: 45658381

GI number: 45658381

Start: 3078648

End: 3079394

Strand: Reverse

Name: 45658381

Synonym: LIC12539

Alternate gene names: NA

Gene position: 3079394-3078648 (Counterclockwise)

Preceding gene: 45658382

Following gene: 45658380

Centisome position: 72.0

GC content: 35.21

Gene sequence:

>747_bases
ATGAAAAAAATTTCGATCTTAATTCTAATCTTTTTATTTTTAGGGAATTTGGCGCTATTCTCTCAGGATGGGGAAGAGAT
CGACTTTTTAGAAAAGGTCACGGAGCCTAAAAAAACAGTAAGTAAAAAATCTTCTAATACGGCGGGCGCTTCTTCGGGGA
CATCCACTCCTAAAAAAAAGGAAAAGAAAAGATCCAAAAAGAAAAGATCTAAAAAATCTTCTTCTTCCATTCCAAACAAT
CTGGAAGAAACCCAAAAGAAAAATGTAATACCTAATACTAACGAAACTTCTTCTGGAAATAATAATTCTAATTTGAATGG
GAGCAATTCAGGTTCTTCTAATACACTTGAATCCGGAAATGTAGATGAACAACGCGTGAGCGCTTCTAAGATGGATCTTA
GAGATTTACCTAAACCGTATTGGGTTAACGAAGAAGTTCAAATTCATCCTAACAATTTGCCGGGTTATACGGTTTCTCAA
AAATCGGAACAAGGCTCCTCTTTTGGAAGTGGACTTTCCGAAATACTCAAGTTAGGTGAAGACAAAAAAAAGGAAGAGAA
CAAAAAGAAAGTTCAGGAAGTACAAAAATCAGGCTCCTTTACTGGATTTATTTCTGAGTATAAAAAGCCTATTATCATTA
TAGTATTTATTTTATTATTTGCTTTATACCGATTGAAAGCGGGTAAATCACGCGGAAGTTCCAGCCGCAAATCCCCGGTT
ACGATCAATAAAATGAGAAGAGATTAG

Upstream 100 bases:

>100_bases
TCAAAGACAATAACGAAGTAGTTGTTCTGAATATCGCTAAAGATACCAACGTATCCTTTACCGCGAGTACGGTTCTAAAA
AAGAAACAACAAGCGGACAA

Downstream 100 bases:

>100_bases
GAGTTTTCTTTTGAAATCTGCGACATGGATTTTTTTGCCGCTCTTGATTATTTTGGCGGCCACGGTGATACTTTATCCCA
ACTTCGCGACTAGAGAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKKISILILIFLFLGNLALFSQDGEEIDFLEKVTEPKKTVSKKSSNTAGASSGTSTPKKKEKKRSKKKRSKKSSSSIPNN
LEETQKKNVIPNTNETSSGNNNSNLNGSNSGSSNTLESGNVDEQRVSASKMDLRDLPKPYWVNEEVQIHPNNLPGYTVSQ
KSEQGSSFGSGLSEILKLGEDKKKEENKKKVQEVQKSGSFTGFISEYKKPIIIIVFILLFALYRLKAGKSRGSSSRKSPV
TINKMRRD

Sequences:

>Translated_248_residues
MKKISILILIFLFLGNLALFSQDGEEIDFLEKVTEPKKTVSKKSSNTAGASSGTSTPKKKEKKRSKKKRSKKSSSSIPNN
LEETQKKNVIPNTNETSSGNNNSNLNGSNSGSSNTLESGNVDEQRVSASKMDLRDLPKPYWVNEEVQIHPNNLPGYTVSQ
KSEQGSSFGSGLSEILKLGEDKKKEENKKKVQEVQKSGSFTGFISEYKKPIIIIVFILLFALYRLKAGKSRGSSSRKSPV
TINKMRRD
>Mature_248_residues
MKKISILILIFLFLGNLALFSQDGEEIDFLEKVTEPKKTVSKKSSNTAGASSGTSTPKKKEKKRSKKKRSKKSSSSIPNN
LEETQKKNVIPNTNETSSGNNNSNLNGSNSGSSNTLESGNVDEQRVSASKMDLRDLPKPYWVNEEVQIHPNNLPGYTVSQ
KSEQGSSFGSGLSEILKLGEDKKKEENKKKVQEVQKSGSFTGFISEYKKPIIIIVFILLFALYRLKAGKSRGSSSRKSPV
TINKMRRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27451; Mature: 27451

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISILILIFLFLGNLALFSQDGEEIDFLEKVTEPKKTVSKKSSNTAGASSGTSTPKKK
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHH
EKKRSKKKRSKKSSSSIPNNLEETQKKNVIPNTNETSSGNNNSNLNGSNSGSSNTLESGN
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VDEQRVSASKMDLRDLPKPYWVNEEVQIHPNNLPGYTVSQKSEQGSSFGSGLSEILKLGE
CHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCC
DKKKEENKKKVQEVQKSGSFTGFISEYKKPIIIIVFILLFALYRLKAGKSRGSSSRKSPV
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TINKMRRD
CHHHHCCC
>Mature Secondary Structure
MKKISILILIFLFLGNLALFSQDGEEIDFLEKVTEPKKTVSKKSSNTAGASSGTSTPKKK
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHH
EKKRSKKKRSKKSSSSIPNNLEETQKKNVIPNTNETSSGNNNSNLNGSNSGSSNTLESGN
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VDEQRVSASKMDLRDLPKPYWVNEEVQIHPNNLPGYTVSQKSEQGSSFGSGLSEILKLGE
CHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCC
DKKKEENKKKVQEVQKSGSFTGFISEYKKPIIIIVFILLFALYRLKAGKSRGSSSRKSPV
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TINKMRRD
CHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA