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The map label for this gene is tyrA

Identifier: 45658293

GI number: 45658293

Start: 2968195

End: 2969112

Strand: Reverse

Name: tyrA

Synonym: LIC12450

Alternate gene names: 45658293

Gene position: 2969112-2968195 (Counterclockwise)

Preceding gene: 45658294

Following gene: 45658292

Centisome position: 69.42

GC content: 36.49

Gene sequence:

>918_bases
GTGAAATTAGAATTTTCTAATATTTTAATTTACGGATTGGGGCTGATGGGCGCTTCGCTTTCTTTGGCGCTTAAACAAAA
GGGGATTTCAGCATCTATCACTGGGGTTGTAGGTTCTACTAAAAGTAAAATAAAGGGACAATCCTTAAAATCCGCGGATC
AAATTTTAACTTCGGAAGAATTTCGCTCTACACAAAGTTGGAAAGATTACGATTTTATTATATTTGGAGTTCCAGTAGAT
CTTACGGTAAAATTGATTTCCGAGTTGCCCACCGATTTTTCAGGAATTATCACTGATTTAGGCTCCACTAAAAAAGAAAT
CATTCATGCGGTGGAGACCCATTTTTCATCTGGACACAATTATATTTCTTCTCATCCGATGTGTGGTTCAGAGGAATCTG
GACTTGAATTCGCAAACTCGTCGTTATATGAAGGACGACTTTGTATTTTGACTTCTCCAAAAAATGTAAAACTGGGAATT
CAGGATCGTTTAAAAAACTTTTGGAAATTTGTCGGGACTACAACGATAGAAATTTCTGCAGAGGAACACGATTCTATTCT
ATCGTATCTATCACATTCTCCTCATATACTTTCTTCGATTATGGCGGATTGGGCAGCTAATCAAAAAACGATAAAACGTT
ATACGGATCTTTCCCCAATCCCTTTAAATGGAGGAGGGTTTCGAGATATGACTCGAATTGCAGGTTCCAACCCAAAAATG
TGGGCAGCTATTTTTGGTTCTAATCAGGACGAAATTTTTCGTTCGTTATCCGACTTTAGGGATCGACTTGATATTATATT
AGAAAAATTGAATCCAAAAAATACTCTAGATCCGGAAGAATGGGAACGATTTATGGAAATTTCTCGTAGATCTAGAGATT
TTATTTTGAAGAACCAGGATGATTCCAAAAAAAACTAA

Upstream 100 bases:

>100_bases
ATCAAAAGGATCCATCGATCCAAAACGTTCTCGCCGGTCTGAAAGAAAATACTATTTTTTTGAGAGTACTCGGTTCTTAT
CCGATGTCTCCGCAAAACCT

Downstream 100 bases:

>100_bases
ACTCAAATCCAGGGAAATAGAAGTTCCGGGAGATAAATCACTTTCTCACCGTTCCGTTTTGTTTGCGGCGCTTTCCAAAG
GCAAATCCAAAGTAACCGGA

Product: prephenate (chorismate) dehydrogenase

Products: NA

Alternate protein names: PDH [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKLEFSNILIYGLGLMGASLSLALKQKGISASITGVVGSTKSKIKGQSLKSADQILTSEEFRSTQSWKDYDFIIFGVPVD
LTVKLISELPTDFSGIITDLGSTKKEIIHAVETHFSSGHNYISSHPMCGSEESGLEFANSSLYEGRLCILTSPKNVKLGI
QDRLKNFWKFVGTTTIEISAEEHDSILSYLSHSPHILSSIMADWAANQKTIKRYTDLSPIPLNGGGFRDMTRIAGSNPKM
WAAIFGSNQDEIFRSLSDFRDRLDIILEKLNPKNTLDPEEWERFMEISRRSRDFILKNQDDSKKN

Sequences:

>Translated_305_residues
MKLEFSNILIYGLGLMGASLSLALKQKGISASITGVVGSTKSKIKGQSLKSADQILTSEEFRSTQSWKDYDFIIFGVPVD
LTVKLISELPTDFSGIITDLGSTKKEIIHAVETHFSSGHNYISSHPMCGSEESGLEFANSSLYEGRLCILTSPKNVKLGI
QDRLKNFWKFVGTTTIEISAEEHDSILSYLSHSPHILSSIMADWAANQKTIKRYTDLSPIPLNGGGFRDMTRIAGSNPKM
WAAIFGSNQDEIFRSLSDFRDRLDIILEKLNPKNTLDPEEWERFMEISRRSRDFILKNQDDSKKN
>Mature_305_residues
MKLEFSNILIYGLGLMGASLSLALKQKGISASITGVVGSTKSKIKGQSLKSADQILTSEEFRSTQSWKDYDFIIFGVPVD
LTVKLISELPTDFSGIITDLGSTKKEIIHAVETHFSSGHNYISSHPMCGSEESGLEFANSSLYEGRLCILTSPKNVKLGI
QDRLKNFWKFVGTTTIEISAEEHDSILSYLSHSPHILSSIMADWAANQKTIKRYTDLSPIPLNGGGFRDMTRIAGSNPKM
WAAIFGSNQDEIFRSLSDFRDRLDIILEKLNPKNTLDPEEWERFMEISRRSRDFILKNQDDSKKN

Specific function: Unknown

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR002912
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF01842 ACT; PF02153 PDH [H]

EC number: =1.3.1.12 [H]

Molecular weight: Translated: 34138; Mature: 34138

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEFSNILIYGLGLMGASLSLALKQKGISASITGVVGSTKSKIKGQSLKSADQILTSEE
CCCCHHHHHEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCHHHHHHHHHHHHH
FRSTQSWKDYDFIIFGVPVDLTVKLISELPTDFSGIITDLGSTKKEIIHAVETHFSSGHN
HHCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCC
YISSHPMCGSEESGLEFANSSLYEGRLCILTSPKNVKLGIQDRLKNFWKFVGTTTIEISA
CCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHCCEEEEEEC
EEHDSILSYLSHSPHILSSIMADWAANQKTIKRYTDLSPIPLNGGGFRDMTRIAGSNPKM
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCE
WAAIFGSNQDEIFRSLSDFRDRLDIILEKLNPKNTLDPEEWERFMEISRRSRDFILKNQD
EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCC
DSKKN
CCCCC
>Mature Secondary Structure
MKLEFSNILIYGLGLMGASLSLALKQKGISASITGVVGSTKSKIKGQSLKSADQILTSEE
CCCCHHHHHEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCHHHHHHHHHHHHH
FRSTQSWKDYDFIIFGVPVDLTVKLISELPTDFSGIITDLGSTKKEIIHAVETHFSSGHN
HHCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCC
YISSHPMCGSEESGLEFANSSLYEGRLCILTSPKNVKLGIQDRLKNFWKFVGTTTIEISA
CCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHCCEEEEEEC
EEHDSILSYLSHSPHILSSIMADWAANQKTIKRYTDLSPIPLNGGGFRDMTRIAGSNPKM
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCE
WAAIFGSNQDEIFRSLSDFRDRLDIILEKLNPKNTLDPEEWERFMEISRRSRDFILKNQD
EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCC
DSKKN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA