| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45658229
Identifier: 45658229
GI number: 45658229
Start: 2889207
End: 2889416
Strand: Reverse
Name: 45658229
Synonym: LIC12383
Alternate gene names: NA
Gene position: 2889416-2889207 (Counterclockwise)
Preceding gene: 45658231
Following gene: 45658228
Centisome position: 67.55
GC content: 34.29
Gene sequence:
>210_bases TTGAGTTTGAAAAATTCCGAAGGAATTGGAGCAAAAAGCGCGCCGGATTTGCCCAAATTTTACTACACTGAATTCACAAA ATTAGAGTTGTTTAAAAATGAATCTTCCATCTCTGTTTTTTGGAAACGCTCGATTGAATCCTTGCCACTTTCAACAACTC TATTATTGAAATGTAAACTATTGAATTCGATTTCTGTCTTATCGTTCTGA
Upstream 100 bases:
>100_bases CCGAGTAATCATAAATATTGTAATCAAGAGTTGATTAACACGAGTTCGGCGTAATCCAATGCAAAAGCGATTATTATGCT GCGATTCGTAGAGAGCAGCA
Downstream 100 bases:
>100_bases GTGGTAGTAATATAGATTATTTTTAAAATCAATTCTGAAAACTTGATGGATCAAGATTGAATCTGTTTTTTTAAGAAATG GAAAAAACTGTAAAATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSLKNSEGIGAKSAPDLPKFYYTEFTKLELFKNESSISVFWKRSIESLPLSTTLLLKCKLLNSISVLSF
Sequences:
>Translated_69_residues MSLKNSEGIGAKSAPDLPKFYYTEFTKLELFKNESSISVFWKRSIESLPLSTTLLLKCKLLNSISVLSF >Mature_68_residues SLKNSEGIGAKSAPDLPKFYYTEFTKLELFKNESSISVFWKRSIESLPLSTTLLLKCKLLNSISVLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7791; Mature: 7660
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKNSEGIGAKSAPDLPKFYYTEFTKLELFKNESSISVFWKRSIESLPLSTTLLLKCKL CCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHH LNSISVLSF CCCCCCCCC >Mature Secondary Structure SLKNSEGIGAKSAPDLPKFYYTEFTKLELFKNESSISVFWKRSIESLPLSTTLLLKCKL CCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHH LNSISVLSF CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA