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The map label for this gene is rcp1 [H]

Identifier: 45658226

GI number: 45658226

Start: 2885270

End: 2885734

Strand: Direct

Name: rcp1 [H]

Synonym: LIC12380

Alternate gene names: 45658226

Gene position: 2885270-2885734 (Clockwise)

Preceding gene: 45658225

Following gene: 45658227

Centisome position: 67.46

GC content: 35.05

Gene sequence:

>465_bases
ATGATAAAAATGTATAATCTTCAGGATGAATTGATAGAGATCTTATATGCGGAAGACAATCCTCAGGATTCTGAACTTAC
TCTAAGAAGTTTAAAAAAACATAAACTTACAGATCAAGTCAAACACGTCCGGGATGGGGAAGAAGCTTTAGAATATTTAT
ACGCAACCGGACGTTACGCAAATCGGGATAAAACGAGAGTGCCTTCTCTCATTCTTTTAGATTTAAAAATGCCTAAAGTG
GACGGGATCGAAGTATTAAGAAGAGTCAGAAACGAAGAAAATACCAAGATGCTTCCGGTAGTGATACTCACTTCTTCTGC
CGAAGAAAAAGATATTATAGAAAGTTATAAACTAGGGGTAAATAGTTACGTAGTTAAACCATTTGAATTTGATAAATTTG
GAGAAGTAGCCAGTGAAATCGGATTTTACTGGGTCTTAATAAATCAAAGTGTAAGTCGCACTTAA

Upstream 100 bases:

>100_bases
CTTGCCATCGTCAAAAGGGTAATAGAAAGACACAATGGTAGAGTTTGGGGAAAAGGTAACCTGAACGAGGGCGCTTGTTT
TTATTTTACGTTAGGAGTCA

Downstream 100 bases:

>100_bases
ATCGTTCGATCCAAAATATCAAAATCATTTGCACATTAAATTTAAGTTTTTAGAAAAAATTTACGTATTATAAAATTTAA
ATATTCTAAAATATACAAAT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIKMYNLQDELIEILYAEDNPQDSELTLRSLKKHKLTDQVKHVRDGEEALEYLYATGRYANRDKTRVPSLILLDLKMPKV
DGIEVLRRVRNEENTKMLPVVILTSSAEEKDIIESYKLGVNSYVVKPFEFDKFGEVASEIGFYWVLINQSVSRT

Sequences:

>Translated_154_residues
MIKMYNLQDELIEILYAEDNPQDSELTLRSLKKHKLTDQVKHVRDGEEALEYLYATGRYANRDKTRVPSLILLDLKMPKV
DGIEVLRRVRNEENTKMLPVVILTSSAEEKDIIESYKLGVNSYVVKPFEFDKFGEVASEIGFYWVLINQSVSRT
>Mature_154_residues
MIKMYNLQDELIEILYAEDNPQDSELTLRSLKKHKLTDQVKHVRDGEEALEYLYATGRYANRDKTRVPSLILLDLKMPKV
DGIEVLRRVRNEENTKMLPVVILTSSAEEKDIIESYKLGVNSYVVKPFEFDKFGEVASEIGFYWVLINQSVSRT

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788191, Length=101, Percent_Identity=32.6732673267327, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: 2.7.3.-

Molecular weight: Translated: 17887; Mature: 17887

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKMYNLQDELIEILYAEDNPQDSELTLRSLKKHKLTDQVKHVRDGEEALEYLYATGRYA
CCEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
NRDKTRVPSLILLDLKMPKVDGIEVLRRVRNEENTKMLPVVILTSSAEEKDIIESYKLGV
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHCCC
NSYVVKPFEFDKFGEVASEIGFYWVLINQSVSRT
CCEEECCCCCHHHHHHHHHHCEEEEEECCCCCCC
>Mature Secondary Structure
MIKMYNLQDELIEILYAEDNPQDSELTLRSLKKHKLTDQVKHVRDGEEALEYLYATGRYA
CCEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
NRDKTRVPSLILLDLKMPKVDGIEVLRRVRNEENTKMLPVVILTSSAEEKDIIESYKLGV
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHCCC
NSYVVKPFEFDKFGEVASEIGFYWVLINQSVSRT
CCEEECCCCCHHHHHHHHHHCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]