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The map label for this gene is pirin

Identifier: 45658206

GI number: 45658206

Start: 2859408

End: 2860415

Strand: Reverse

Name: pirin

Synonym: LIC12360

Alternate gene names: 45658206

Gene position: 2860415-2859408 (Counterclockwise)

Preceding gene: 45658207

Following gene: 45658203

Centisome position: 66.88

GC content: 36.41

Gene sequence:

>1008_bases
TTGGGACAAGTTCTAAATATAAAATTTCTTGTAAGCCATTTTGCCGATCTATATATAATAAGTACTTTAAATTTTTATTG
TAAAATATTAGGTATTTTTTATATACTTATTGATGATGAAAGAATTATTCCATTTCTTTATAATAAACTTATGAAAATAA
TTTCTGCGATAACTAAAGATTTAGGCGAAAATTTCCAGGTTCGAAGAGTACTCCCTTCTATAAAAGCGCGTTATGTAGGA
CCGTTTGTATTCGTAGATCATATGGGACCGGTTTCCATTCAAACCGGAAAAGAACTAACGGTTCGTTCACATCCTCATAT
TGGATTGGCTACAATAACTTATCTTTATGACGGAGTTATACTTCATCGAGATAGTATCGGTTCCGAAATGAAAATTTGTC
CCTATGAAGTCAATTGGATGACAGCGGGTTCTGGAATTGCACACAGTGAACGTTCTCAGTTGGATTTACAATATTCTATT
TTAGAAGGAATACAAACTTGGGTGGCTCTTCCTAAAGAGTCGGAAGAAGTAGAGCCCGAATTTTTTCATCTCAATAGAAA
TGAAATTCCTGTGATTTCGGAAAAGGGTTGGGAGCTGAGGTTGATTGCAGGAGAATTTTTAGGTAAACGTTCTCCCGTAA
AAGTGTATTCGAAACTTTTTTATGCCGATTTAGAAGTTCAGTCGGGAGGAGAAGGAAAATGGAATATATCCTCCGATCAA
GAGTCCGCTTTGTATGTGGCGCGAGGAAGTTTAGAAGTTCAAGGTCAAAAAATTCAAATGGGAAATATGGCGGTATTTGA
TTTAGGGGAAACGATTTCTTTTTATTCCGAGGAAGGAAGTCGTTCGATTCTTTTGGGAGGAGTTCCATTTCCGGAACGTA
GGCATCTTTGGTGGAATTTTGTATCTACTTCTTTAGAAAGAATCGAAAAGGCAAAACTAGAATGGAAACAGGAACGTTTT
CCAAAGGTCCCTGGTGAGACGGAAAGAATTCCTCTTCCTGAATTTTAA

Upstream 100 bases:

>100_bases
CTCTAAAGCTCGCAAATTGCCATATGTAACTTAATTTGTGGGAATTACTGCATTTGATTAAAAATTTCTAAAGAATTATT
ACATAAAATTCTTTAAGGTT

Downstream 100 bases:

>100_bases
ATTAGAATATAATAATATTTTTTTAAACTTTGGTTCTGTTTTTACTAATTCTTGTAAAAAGGAGTATTTAGAATCTATTT
CAAAAATACTTTACTTTTGT

Product: pirin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MGQVLNIKFLVSHFADLYIISTLNFYCKILGIFYILIDDERIIPFLYNKLMKIISAITKDLGENFQVRRVLPSIKARYVG
PFVFVDHMGPVSIQTGKELTVRSHPHIGLATITYLYDGVILHRDSIGSEMKICPYEVNWMTAGSGIAHSERSQLDLQYSI
LEGIQTWVALPKESEEVEPEFFHLNRNEIPVISEKGWELRLIAGEFLGKRSPVKVYSKLFYADLEVQSGGEGKWNISSDQ
ESALYVARGSLEVQGQKIQMGNMAVFDLGETISFYSEEGSRSILLGGVPFPERRHLWWNFVSTSLERIEKAKLEWKQERF
PKVPGETERIPLPEF

Sequences:

>Translated_335_residues
MGQVLNIKFLVSHFADLYIISTLNFYCKILGIFYILIDDERIIPFLYNKLMKIISAITKDLGENFQVRRVLPSIKARYVG
PFVFVDHMGPVSIQTGKELTVRSHPHIGLATITYLYDGVILHRDSIGSEMKICPYEVNWMTAGSGIAHSERSQLDLQYSI
LEGIQTWVALPKESEEVEPEFFHLNRNEIPVISEKGWELRLIAGEFLGKRSPVKVYSKLFYADLEVQSGGEGKWNISSDQ
ESALYVARGSLEVQGQKIQMGNMAVFDLGETISFYSEEGSRSILLGGVPFPERRHLWWNFVSTSLERIEKAKLEWKQERF
PKVPGETERIPLPEF
>Mature_334_residues
GQVLNIKFLVSHFADLYIISTLNFYCKILGIFYILIDDERIIPFLYNKLMKIISAITKDLGENFQVRRVLPSIKARYVGP
FVFVDHMGPVSIQTGKELTVRSHPHIGLATITYLYDGVILHRDSIGSEMKICPYEVNWMTAGSGIAHSERSQLDLQYSIL
EGIQTWVALPKESEEVEPEFFHLNRNEIPVISEKGWELRLIAGEFLGKRSPVKVYSKLFYADLEVQSGGEGKWNISSDQE
SALYVARGSLEVQGQKIQMGNMAVFDLGETISFYSEEGSRSILLGGVPFPERRHLWWNFVSTSLERIEKAKLEWKQERFP
KVPGETERIPLPEF

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=265, Percent_Identity=28.6792452830189, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI4505823, Length=265, Percent_Identity=28.6792452830189, Blast_Score=105, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 38299; Mature: 38167

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVLNIKFLVSHFADLYIISTLNFYCKILGIFYILIDDERIIPFLYNKLMKIISAITKD
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH
LGENFQVRRVLPSIKARYVGPFVFVDHMGPVSIQTGKELTVRSHPHIGLATITYLYDGVI
HCCCCEEHHHHHHHHHHHCCCEEEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHCCEE
LHRDSIGSEMKICPYEVNWMTAGSGIAHSERSQLDLQYSILEGIQTWVALPKESEEVEPE
EEECCCCCCCEECEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FFHLNRNEIPVISEKGWELRLIAGEFLGKRSPVKVYSKLFYADLEVQSGGEGKWNISSDQ
EEECCCCCCCEEECCCCEEEEEEHHHHCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCC
ESALYVARGSLEVQGQKIQMGNMAVFDLGETISFYSEEGSRSILLGGVPFPERRHLWWNF
CCEEEEEECCEEECCCEEEECCEEEEECCCHHHHHCCCCCCEEEECCCCCCCCCHHHHHH
VSTSLERIEKAKLEWKQERFPKVPGETERIPLPEF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQVLNIKFLVSHFADLYIISTLNFYCKILGIFYILIDDERIIPFLYNKLMKIISAITKD
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH
LGENFQVRRVLPSIKARYVGPFVFVDHMGPVSIQTGKELTVRSHPHIGLATITYLYDGVI
HCCCCEEHHHHHHHHHHHCCCEEEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHCCEE
LHRDSIGSEMKICPYEVNWMTAGSGIAHSERSQLDLQYSILEGIQTWVALPKESEEVEPE
EEECCCCCCCEECEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FFHLNRNEIPVISEKGWELRLIAGEFLGKRSPVKVYSKLFYADLEVQSGGEGKWNISSDQ
EEECCCCCCCEEECCCCEEEEEEHHHHCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCC
ESALYVARGSLEVQGQKIQMGNMAVFDLGETISFYSEEGSRSILLGGVPFPERRHLWWNF
CCEEEEEECCEEECCCEEEECCEEEEECCCHHHHHCCCCCCEEEECCCCCCCCCHHHHHH
VSTSLERIEKAKLEWKQERFPKVPGETERIPLPEF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]