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The map label for this gene is 45658186

Identifier: 45658186

GI number: 45658186

Start: 2830042

End: 2831925

Strand: Reverse

Name: 45658186

Synonym: LIC12340

Alternate gene names: NA

Gene position: 2831925-2830042 (Counterclockwise)

Preceding gene: 45658192

Following gene: 45658185

Centisome position: 66.21

GC content: 38.54

Gene sequence:

>1884_bases
ATGGGTCGTTGGATCGTCCTAAGGGTATCTTTGTTAGTCTTGATTGGAATTGGTTTCGAATATGGAATTAACCATACATC
AATAAATGCTTCATCAAAGAGTGATTACTCGATAGCTCAGAAACCTGCAGATCAACCAAAAGATAAGTCAATTCAAGTTG
TTATGCATGGCGGAAGTAATTATTGTTACTCTCCTGTCTTTACTAAAGGTGAAGGTTATATTTGGATTGACTATTGTAGT
GATAATACTGCTAAAGCAAGATACGATGTGTTTCAAAGAATTTCGTATAACATCAATAATACGTGGTTATGTATTACTGC
TCCGGAGACAGTAGTTAAAGGGGAAGAAACCTGGAACTATGTAAACCTCAGGCCTTGTACTATCAATGATCCTCTGCAAA
GATGGATCGTAAAAGATAATTCCTTTTGGACTGCAAATGGACGTTATCGTTTAAAAGATACAAATTGGTATGGTTATATT
TCTAGAAATTCTGGTGATAGATACGACCATACCTTAAATTCTTCCATGGACGATTGGATTAAAACAGTAGCTATTCCCGG
TAACATCAGCATTCAAACTTCTATCGCTTGGGATTTGCAAACTACTGAGGGAAATGAACGTTATTTTATTCGCTGGGGAA
GTTCGAATAAAAATACAACTCCTCTGTACTACAATCCTGAAAGTGGACATATTGCACAGTATGATCCTTCAAGTGGTCTT
CTTAATTGTATGTATTCTAAGATGACAGATAAATATGATTGGAATTGGGTTAAATGGGGAAAATGTAGTGATGCACCTAT
TAAAAAAGATAATCCAGCTTTTTGGAATGTATTTTTTGAAACCGACAAAGAAGGGGCGATCACAGACTACAAAGGTAATG
TGCTGAGAGTTACCAGATATGGACTCAATTGGGGGGTTGCCTATACAGTCAAACCTTCTTATTTAGAAAAGGACACTACT
CATAGTCCCACTTCTTTGTTTGTTATTGATAAAGATTTACTGGATTGGACACGTTATACGTATTCTAATCTTGGTAAAAC
AGATCAGTATTGTCCAGCTGGTAATAAAGAAAGTCTTGTACGGAAACGAGTCAAAAGGAACTTGAACTTACCTTCTGACT
TTCAATTAACCAGGGAGTGGATTCAAAGGCTTTATGAGATAGCTAGATCGAGTATATCTCGTGCTATTCCATGCCGTGGG
GTATGCGGTGTTTGTATGCTTCATAGTTACCAAATGATAGCAGAGTTATTAGAATATCATTCTCGAGGACCTCTTACAGG
CGGAGGATATTTCTTTGATACTGCTCCTAATAGAGATCCTTTTATTTCGTTTAATCAACGTTATCCGCAATTGAATGCAT
TGCTTACAAATGTACCTAGTTACGCTAATAGGCCCGGATTCGGATCTACTCTGGTTATGTTGCCTCAGTATGAGTGGACG
TCTTCTGACACAATCACTACTCGGTCTGGTAGATTATTACATGCTAGATCTCTTATCAATTCTCCTCCTGGAAGCATTTG
GTTGGGATTATTGAGGGGAAGAGATGCGGACGGATCTACTTGGGGGCACGCCGTTCCCATTCTGAGAACTTCTCAAGGAA
TAGTGGTAATTCCAACAAATTCGCCTACGATGTCGTTGAATACCTACATTCGATCTTTAGCGCCTACTATGGATCCGAAC
GAGGTAATCAATAGATTAGAAAATGGAAGTACTCTGACGGAACTTACAACCATACAGCCGGTAAGGATTTACGATATTCC
TTTTAGTCTCACTGTTTCTACTAGGGATTGTACTGGAGATGGGGATGGTAGAAGGGGTTCAGGAAGATATCCAACTAGTT
CATTGATAAATCAGTGTTCGGGAGGTAGATGTATTTTGCAGTAA

Upstream 100 bases:

>100_bases
AACTAGTTCGAACAGAATTTGTTAGGAATATCGCGTTTGTCCTAATGTGTTTATAGTTGCATACAACGTCTCAATTTTTC
AAAAGAATGGAGGATATAAA

Downstream 100 bases:

>100_bases
GTCAGTAAAGGAAGAAAAACAATCTTTCTGGATGTCTTAACAAAAAGAGTTGTTGGCGTAGATTACAATTTTATGAATAT
AAATCTACGTCAACGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MGRWIVLRVSLLVLIGIGFEYGINHTSINASSKSDYSIAQKPADQPKDKSIQVVMHGGSNYCYSPVFTKGEGYIWIDYCS
DNTAKARYDVFQRISYNINNTWLCITAPETVVKGEETWNYVNLRPCTINDPLQRWIVKDNSFWTANGRYRLKDTNWYGYI
SRNSGDRYDHTLNSSMDDWIKTVAIPGNISIQTSIAWDLQTTEGNERYFIRWGSSNKNTTPLYYNPESGHIAQYDPSSGL
LNCMYSKMTDKYDWNWVKWGKCSDAPIKKDNPAFWNVFFETDKEGAITDYKGNVLRVTRYGLNWGVAYTVKPSYLEKDTT
HSPTSLFVIDKDLLDWTRYTYSNLGKTDQYCPAGNKESLVRKRVKRNLNLPSDFQLTREWIQRLYEIARSSISRAIPCRG
VCGVCMLHSYQMIAELLEYHSRGPLTGGGYFFDTAPNRDPFISFNQRYPQLNALLTNVPSYANRPGFGSTLVMLPQYEWT
SSDTITTRSGRLLHARSLINSPPGSIWLGLLRGRDADGSTWGHAVPILRTSQGIVVIPTNSPTMSLNTYIRSLAPTMDPN
EVINRLENGSTLTELTTIQPVRIYDIPFSLTVSTRDCTGDGDGRRGSGRYPTSSLINQCSGGRCILQ

Sequences:

>Translated_627_residues
MGRWIVLRVSLLVLIGIGFEYGINHTSINASSKSDYSIAQKPADQPKDKSIQVVMHGGSNYCYSPVFTKGEGYIWIDYCS
DNTAKARYDVFQRISYNINNTWLCITAPETVVKGEETWNYVNLRPCTINDPLQRWIVKDNSFWTANGRYRLKDTNWYGYI
SRNSGDRYDHTLNSSMDDWIKTVAIPGNISIQTSIAWDLQTTEGNERYFIRWGSSNKNTTPLYYNPESGHIAQYDPSSGL
LNCMYSKMTDKYDWNWVKWGKCSDAPIKKDNPAFWNVFFETDKEGAITDYKGNVLRVTRYGLNWGVAYTVKPSYLEKDTT
HSPTSLFVIDKDLLDWTRYTYSNLGKTDQYCPAGNKESLVRKRVKRNLNLPSDFQLTREWIQRLYEIARSSISRAIPCRG
VCGVCMLHSYQMIAELLEYHSRGPLTGGGYFFDTAPNRDPFISFNQRYPQLNALLTNVPSYANRPGFGSTLVMLPQYEWT
SSDTITTRSGRLLHARSLINSPPGSIWLGLLRGRDADGSTWGHAVPILRTSQGIVVIPTNSPTMSLNTYIRSLAPTMDPN
EVINRLENGSTLTELTTIQPVRIYDIPFSLTVSTRDCTGDGDGRRGSGRYPTSSLINQCSGGRCILQ
>Mature_626_residues
GRWIVLRVSLLVLIGIGFEYGINHTSINASSKSDYSIAQKPADQPKDKSIQVVMHGGSNYCYSPVFTKGEGYIWIDYCSD
NTAKARYDVFQRISYNINNTWLCITAPETVVKGEETWNYVNLRPCTINDPLQRWIVKDNSFWTANGRYRLKDTNWYGYIS
RNSGDRYDHTLNSSMDDWIKTVAIPGNISIQTSIAWDLQTTEGNERYFIRWGSSNKNTTPLYYNPESGHIAQYDPSSGLL
NCMYSKMTDKYDWNWVKWGKCSDAPIKKDNPAFWNVFFETDKEGAITDYKGNVLRVTRYGLNWGVAYTVKPSYLEKDTTH
SPTSLFVIDKDLLDWTRYTYSNLGKTDQYCPAGNKESLVRKRVKRNLNLPSDFQLTREWIQRLYEIARSSISRAIPCRGV
CGVCMLHSYQMIAELLEYHSRGPLTGGGYFFDTAPNRDPFISFNQRYPQLNALLTNVPSYANRPGFGSTLVMLPQYEWTS
SDTITTRSGRLLHARSLINSPPGSIWLGLLRGRDADGSTWGHAVPILRTSQGIVVIPTNSPTMSLNTYIRSLAPTMDPNE
VINRLENGSTLTELTTIQPVRIYDIPFSLTVSTRDCTGDGDGRRGSGRYPTSSLINQCSGGRCILQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71140; Mature: 71009

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50231 RICIN_B_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRWIVLRVSLLVLIGIGFEYGINHTSINASSKSDYSIAQKPADQPKDKSIQVVMHGGSN
CCCEEEHHHHHHHHHHCCHHHCCCCEEECCCCCCCCHHHCCCCCCCCCCCEEEEEECCCC
YCYSPVFTKGEGYIWIDYCSDNTAKARYDVFQRISYNINNTWLCITAPETVVKGEETWNY
CEECCEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHEECCCCCCCE
VNLRPCTINDPLQRWIVKDNSFWTANGRYRLKDTNWYGYISRNSGDRYDHTLNSSMDDWI
EEEEECCCCCHHHHHEEECCCEEECCCEEEEEECCEEEEEECCCCCCCCHHHCCCHHHHH
KTVAIPGNISIQTSIAWDLQTTEGNERYFIRWGSSNKNTTPLYYNPESGHIAQYDPSSGL
HEEECCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCCEEEECCCCHH
LNCMYSKMTDKYDWNWVKWGKCSDAPIKKDNPAFWNVFFETDKEGAITDYKGNVLRVTRY
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEEE
GLNWGVAYTVKPSYLEKDTTHSPTSLFVIDKDLLDWTRYTYSNLGKTDQYCPAGNKESLV
CCCCCEEEEECHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
RKRVKRNLNLPSDFQLTREWIQRLYEIARSSISRAIPCRGVCGVCMLHSYQMIAELLEYH
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SRGPLTGGGYFFDTAPNRDPFISFNQRYPQLNALLTNVPSYANRPGFGSTLVMLPQYEWT
CCCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
SSDTITTRSGRLLHARSLINSPPGSIWLGLLRGRDADGSTWGHAVPILRTSQGIVVIPTN
CCCEEEECCCCEEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECC
SPTMSLNTYIRSLAPTMDPNEVINRLENGSTLTELTTIQPVRIYDIPFSLTVSTRDCTGD
CCCEEHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEECCEEEEECCEEEEEECCCCCCC
GDGRRGSGRYPTSSLINQCSGGRCILQ
CCCCCCCCCCCHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
GRWIVLRVSLLVLIGIGFEYGINHTSINASSKSDYSIAQKPADQPKDKSIQVVMHGGSN
CCEEEHHHHHHHHHHCCHHHCCCCEEECCCCCCCCHHHCCCCCCCCCCCEEEEEECCCC
YCYSPVFTKGEGYIWIDYCSDNTAKARYDVFQRISYNINNTWLCITAPETVVKGEETWNY
CEECCEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHEECCCCCCCE
VNLRPCTINDPLQRWIVKDNSFWTANGRYRLKDTNWYGYISRNSGDRYDHTLNSSMDDWI
EEEEECCCCCHHHHHEEECCCEEECCCEEEEEECCEEEEEECCCCCCCCHHHCCCHHHHH
KTVAIPGNISIQTSIAWDLQTTEGNERYFIRWGSSNKNTTPLYYNPESGHIAQYDPSSGL
HEEECCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCCEEEECCCCHH
LNCMYSKMTDKYDWNWVKWGKCSDAPIKKDNPAFWNVFFETDKEGAITDYKGNVLRVTRY
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEEE
GLNWGVAYTVKPSYLEKDTTHSPTSLFVIDKDLLDWTRYTYSNLGKTDQYCPAGNKESLV
CCCCCEEEEECHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
RKRVKRNLNLPSDFQLTREWIQRLYEIARSSISRAIPCRGVCGVCMLHSYQMIAELLEYH
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SRGPLTGGGYFFDTAPNRDPFISFNQRYPQLNALLTNVPSYANRPGFGSTLVMLPQYEWT
CCCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
SSDTITTRSGRLLHARSLINSPPGSIWLGLLRGRDADGSTWGHAVPILRTSQGIVVIPTN
CCCEEEECCCCEEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECC
SPTMSLNTYIRSLAPTMDPNEVINRLENGSTLTELTTIQPVRIYDIPFSLTVSTRDCTGD
CCCEEHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEECCEEEEECCEEEEEECCCCCCC
GDGRRGSGRYPTSSLINQCSGGRCILQ
CCCCCCCCCCCHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA