Click here to switch to the map view.

The map label for this gene is yhcV [H]

Identifier: 45658085

GI number: 45658085

Start: 2702491

End: 2702931

Strand: Direct

Name: yhcV [H]

Synonym: LIC12236

Alternate gene names: 45658085

Gene position: 2702491-2702931 (Clockwise)

Preceding gene: 45658083

Following gene: 45658086

Centisome position: 63.18

GC content: 33.79

Gene sequence:

>441_bases
ATGTATATAAAACAAATCCTAGCAAAAAAAGATAGAAGGGTATTATCGGTAGAACCAGAAACCTTGGTAATGGATGTGGT
CAAATTTATGACCAAATATGACATTGGATCAGTTATAATTTTAGGAGAAGGAAAACTCAAAGGAATTTTTACAGAAAGAG
ATGTACTTCATCTTTCGGCAGAATTGGGTCTTGATCTTTTTAAAAAATCGGTTTCAGAAGTAATGACAACTTCCATTACC
ACGATGACTCCGGAAGACGATGTAGATGAACTTCTTTCCATTATGCTCAAAAAAAGGATTCGTCACATGCCCATCTTAGA
AAACGACACTTTAATAGGAATCATCTCTATCGGAGATGCGGTCAAAGCAAAGATCGAAAAAACAGAAGAAGAAAATAAAA
ATCTCAAACAATATATGTACAGTGAAAACGGATTTATCTAA

Upstream 100 bases:

>100_bases
AAAATGAGAAAATAGGAACATGAATTTTTTACAAGGCATTTCGTTTTCATTCCTTGAGAAATAATCTAAATAAAATGATA
ATAACCAAAAGGGAGAAGGT

Downstream 100 bases:

>100_bases
AACTACTTGTGCAAAAAGATTATAGAATTAGGATCTTTCGAAAATACAAAAACTCTTGTAAATTTTTACTTTTTTTCCGA
TTGCAATAAACAAGACCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MYIKQILAKKDRRVLSVEPETLVMDVVKFMTKYDIGSVIILGEGKLKGIFTERDVLHLSAELGLDLFKKSVSEVMTTSIT
TMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISIGDAVKAKIEKTEEENKNLKQYMYSENGFI

Sequences:

>Translated_146_residues
MYIKQILAKKDRRVLSVEPETLVMDVVKFMTKYDIGSVIILGEGKLKGIFTERDVLHLSAELGLDLFKKSVSEVMTTSIT
TMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISIGDAVKAKIEKTEEENKNLKQYMYSENGFI
>Mature_146_residues
MYIKQILAKKDRRVLSVEPETLVMDVVKFMTKYDIGSVIILGEGKLKGIFTERDVLHLSAELGLDLFKKSVSEVMTTSIT
TMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISIGDAVKAKIEKTEEENKNLKQYMYSENGFI

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 16625; Mature: 16625

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIKQILAKKDRRVLSVEPETLVMDVVKFMTKYDIGSVIILGEGKLKGIFTERDVLHLSA
CCHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHH
ELGLDLFKKSVSEVMTTSITTMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISIGDA
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHH
VKAKIEKTEEENKNLKQYMYSENGFI
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYIKQILAKKDRRVLSVEPETLVMDVVKFMTKYDIGSVIILGEGKLKGIFTERDVLHLSA
CCHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHH
ELGLDLFKKSVSEVMTTSITTMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISIGDA
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHH
VKAKIEKTEEENKNLKQYMYSENGFI
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]