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The map label for this gene is 45657990

Identifier: 45657990

GI number: 45657990

Start: 2589178

End: 2590323

Strand: Reverse

Name: 45657990

Synonym: LIC12142

Alternate gene names: NA

Gene position: 2590323-2589178 (Counterclockwise)

Preceding gene: 45657991

Following gene: 45657989

Centisome position: 60.56

GC content: 29.76

Gene sequence:

>1146_bases
ATGATTTTAGGAATTGATGCTTCAAATATAAAAAGTGGTGGTGGAGTTACACATCTAAAAGAGCTCTTGGGAAACGCAAA
ACCAGAAAAATACGGATTTGACAGAGTTATATTGTGGTCTGTAGAAGAAACTCTATGTCAAATAGAAGATAAATCTTGGC
TTGAAAAAGTAAATTACTCAAAATTTTTTAAAAGCAGGATTTATCGGTGGTACTGGCAAAAATTTAAATTGCCTAAGTTA
GCTCAAAATAGCGGCTGTAAATTACTTTTTATTCCGGGAGGGTCTTTTTCAGGTAAATTTAGACCTTTTATAACAATGAG
TCAAAATTTACTTCCATTTGAATGGGGGGAGTTGAAAAGATATGGATTATCGTTTCATACGTTGCGCTTACTCTTACTTT
ATTTTTTTCAAGGAACTTCTTTTCGTAAATCCGATGGTATTATTTTTCTAACAAAATATGCAAAAGATTTAATTTCTAAA
AAATTAAATCTAAAAAATAGTAATATCATAATTCCACACGGTATTAATAAAAAATTCTTTCATAATCCAAGAAAACAAAA
TATTCTATTGGGCAAAAAAAAACGACCGATAGAATTGCTTTATGTTTCATTTATTGGTGCATATAAACATCAATGGAATG
TACTCGAGGCAGTGAGTGATTTAAATTGTGCAGGGATTCCAATTCATCTAAGCTTGGTTGGTTCTCATAATGAAAAAGCT
TCCGTAAATAAACTTTTCCAGAAAATAAACCATTTAAATTCCTCTGAAAAAATTATTTCACTTTATCCTAATGTATCTTA
TAAAAAAATCTCAGAATTTTATCTAAATGCAGATTTATTCATATTTGCATCGACCTGTGAAAATTTACCTAATATCTTAA
TTGAGGCAATGGCATCAGGCCTTCCAATACTTTCTTCTAAATATGGTCCTATGCCGGAAGTGTTGGATGATGCTGGACTT
TATTGCGATCCTTTGTCGGTGGAGGATATTAAGACCCAGTTGAAAAAATTAATATTCTCTAAAGAGTTAAGAGAAAATTT
ATCTTTAAAAGCTTATAAAAAAGCTAAACAATATTCTTGGAAGAGAAATGCAGATATTACGTTTGACTTTTTTTATAAAA
TTGTAAAAGCATATAAAAAATATTAG

Upstream 100 bases:

>100_bases
GAAATGATTAGATTGGATAATTGTAATTTGAGTAATTTATAATTATCTTTTATATTAAATAATATTAGTTTATTTTTATA
ACGTTATTTACCTTTTCGCA

Downstream 100 bases:

>100_bases
AAAATGTTTAAAGTGAATTATTCAATGAGAGTTTTGGTTTGGGGCATATCTAGAATGATGAGGAATTCCATTTTTAGAAT
TTTTTCGAAAGACAAAAAAT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MILGIDASNIKSGGGVTHLKELLGNAKPEKYGFDRVILWSVEETLCQIEDKSWLEKVNYSKFFKSRIYRWYWQKFKLPKL
AQNSGCKLLFIPGGSFSGKFRPFITMSQNLLPFEWGELKRYGLSFHTLRLLLLYFFQGTSFRKSDGIIFLTKYAKDLISK
KLNLKNSNIIIPHGINKKFFHNPRKQNILLGKKKRPIELLYVSFIGAYKHQWNVLEAVSDLNCAGIPIHLSLVGSHNEKA
SVNKLFQKINHLNSSEKIISLYPNVSYKKISEFYLNADLFIFASTCENLPNILIEAMASGLPILSSKYGPMPEVLDDAGL
YCDPLSVEDIKTQLKKLIFSKELRENLSLKAYKKAKQYSWKRNADITFDFFYKIVKAYKKY

Sequences:

>Translated_381_residues
MILGIDASNIKSGGGVTHLKELLGNAKPEKYGFDRVILWSVEETLCQIEDKSWLEKVNYSKFFKSRIYRWYWQKFKLPKL
AQNSGCKLLFIPGGSFSGKFRPFITMSQNLLPFEWGELKRYGLSFHTLRLLLLYFFQGTSFRKSDGIIFLTKYAKDLISK
KLNLKNSNIIIPHGINKKFFHNPRKQNILLGKKKRPIELLYVSFIGAYKHQWNVLEAVSDLNCAGIPIHLSLVGSHNEKA
SVNKLFQKINHLNSSEKIISLYPNVSYKKISEFYLNADLFIFASTCENLPNILIEAMASGLPILSSKYGPMPEVLDDAGL
YCDPLSVEDIKTQLKKLIFSKELRENLSLKAYKKAKQYSWKRNADITFDFFYKIVKAYKKY
>Mature_381_residues
MILGIDASNIKSGGGVTHLKELLGNAKPEKYGFDRVILWSVEETLCQIEDKSWLEKVNYSKFFKSRIYRWYWQKFKLPKL
AQNSGCKLLFIPGGSFSGKFRPFITMSQNLLPFEWGELKRYGLSFHTLRLLLLYFFQGTSFRKSDGIIFLTKYAKDLISK
KLNLKNSNIIIPHGINKKFFHNPRKQNILLGKKKRPIELLYVSFIGAYKHQWNVLEAVSDLNCAGIPIHLSLVGSHNEKA
SVNKLFQKINHLNSSEKIISLYPNVSYKKISEFYLNADLFIFASTCENLPNILIEAMASGLPILSSKYGPMPEVLDDAGL
YCDPLSVEDIKTQLKKLIFSKELRENLSLKAYKKAKQYSWKRNADITFDFFYKIVKAYKKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43995; Mature: 43995

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILGIDASNIKSGGGVTHLKELLGNAKPEKYGFDRVILWSVEETLCQIEDKSWLEKVNYS
CEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHH
KFFKSRIYRWYWQKFKLPKLAQNSGCKLLFIPGGSFSGKFRPFITMSQNLLPFEWGELKR
HHHHHHHHHHHHHHCCCCCHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHH
YGLSFHTLRLLLLYFFQGTSFRKSDGIIFLTKYAKDLISKKLNLKNSNIIIPHGINKKFF
HCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEECCCCHHHH
HNPRKQNILLGKKKRPIELLYVSFIGAYKHQWNVLEAVSDLNCAGIPIHLSLVGSHNEKA
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH
SVNKLFQKINHLNSSEKIISLYPNVSYKKISEFYLNADLFIFASTCENLPNILIEAMASG
HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCC
LPILSSKYGPMPEVLDDAGLYCDPLSVEDIKTQLKKLIFSKELRENLSLKAYKKAKQYSW
CCCHHCCCCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
KRNADITFDFFYKIVKAYKKY
CCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILGIDASNIKSGGGVTHLKELLGNAKPEKYGFDRVILWSVEETLCQIEDKSWLEKVNYS
CEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHH
KFFKSRIYRWYWQKFKLPKLAQNSGCKLLFIPGGSFSGKFRPFITMSQNLLPFEWGELKR
HHHHHHHHHHHHHHCCCCCHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHH
YGLSFHTLRLLLLYFFQGTSFRKSDGIIFLTKYAKDLISKKLNLKNSNIIIPHGINKKFF
HCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEECCCCHHHH
HNPRKQNILLGKKKRPIELLYVSFIGAYKHQWNVLEAVSDLNCAGIPIHLSLVGSHNEKA
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH
SVNKLFQKINHLNSSEKIISLYPNVSYKKISEFYLNADLFIFASTCENLPNILIEAMASG
HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCC
LPILSSKYGPMPEVLDDAGLYCDPLSVEDIKTQLKKLIFSKELRENLSLKAYKKAKQYSW
CCCHHCCCCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
KRNADITFDFFYKIVKAYKKY
CCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]