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The map label for this gene is 45657963

Identifier: 45657963

GI number: 45657963

Start: 2555930

End: 2557882

Strand: Reverse

Name: 45657963

Synonym: LIC12115

Alternate gene names: NA

Gene position: 2557882-2555930 (Counterclockwise)

Preceding gene: 45657964

Following gene: 45657962

Centisome position: 59.8

GC content: 42.19

Gene sequence:

>1953_bases
ATGCAAGATCTTCTCTTAAAAGCGATTAGCGCCGAAGACGAATTACAAATTCAGGAACTCATTGCAAAGGGCGCCGATCC
CAATCAAATGATCTATGTCCGAAGCCTTAAAGTCCCTCTTTGGTTTAGCGCTTTGCCGATTAGTTTCTCCGGAGGGGTAA
AATTCAAATCGAACGCGTTACGCGCTCTTTTATCCTCGGGCGCGGATTTAAATGCTCTTTCCAATTCGGGTGAGAGCGCC
ATGGAAACCTTGCTTTATTATTGTAAGGACGATACTCGATTTGAAGAGTCCGCAAAAGCTCTACTGGATGCGGGTATAGA
TTTAAACGCACACAAGGAGGAGAGTAGTAGCATACTGAGAAGTGCGGTTTACGCAAAGACAGCGAGTGTACGAAAAGTTT
CCTTTCTTCTCCAAGCGGGAGCAGACGTAAATCTCGCCGATAAAAAAAACGGGGAAACTCCTTTGATTCGTGCCTGTATC
GATTCCGATACGAACGGGGAAGTGATGCTTGAAATCGTTCGACTTTTGATCCGAGCTGGTGCCGACGTGAACGCTCAAGA
AACTTGGAAGGGTTGGTCCTCCTTGATGTGGGTCGCAAAACACGGAAATATGGAAGTGGCAAAGCTTCTAGCGGGCGCGA
ATTTAAAAGCGGAAAGTCTAAAGGGAGATACAAACTCTTATCTGATCGCCTATGAAAACAAACATCAGGATTTTGTTTCG
TGGTTGGAAGAACAAGGAGCCAAAGATACGAGCGATCGGATGTTTCGGATTTTGCAACGGGATTATATTCAAAAAAGTGC
ATGGTCAGAATCGGTCGACGCCGGTTTGAAAGCCATTAAAGCTTTTCCGGAAGACGGGATCGTATGCAATCATCTTTCGT
TTGCGTATCGAAACTTAGGTAGATATGAAGATTCCGTTTCTTGGGCTCGCAGATCTCTCTCGTTTTCCTTCGATCTGGAG
GCTCTGAATCTACTGATCGCAAATTACATCCATTTACAAAAATCGGATCTTGCAATTTTAGAATGTAAAAAATATCGAAC
TCAGATTTTGGAAAGTGGAAAAGACATCGGACAAGTGTTCACGAATCTATTGGTGGCGTATTTCATAGAAAACCGGTCTC
AGGAAGCGATCGATTTTTTAGGCGATCCGTGGAAGATTCAAACGCAAGAATCGGTCTTCTTTCTAAATTTGGCCTGTATT
TATGTAAAATTGGAAAATCACTCTTCGGCAATCCGAAGCCTATTTGAGGCTGTTCGTCTCAAGTATCCGATCGAAAAATT
AAAAAAGGACGAGGATCTGAAACCTTTGACGGAGAATACGGCGTTTCAAATTTTGCTAAAAGGAAATTTTGAGAGGTTGG
AGAGTGAAACGTTCTTTCTAGAAAACGATTGTGTCGAATTGGTTCGGGACCGTTTACAAGTGGAAGAACGTAAAATGTTC
GAAGGAAAAGAGATCCAAAGAACTCGTTTCGAATTTTCGCTTCCTTACGAGGTCTTGCTTAAATATGCCGAATTCAAAGA
CCATTATATTCAATCCGGTTGGGAGTTGAAGTCGGATCGACTTTCACCCGTTGAGGAAGATCTGGTGGTGGAGCTTGACG
ACGTTCTAAAGAAGTTTCAAACCGATCAAAAGATCGGGGCAATTTTATTGGAATGGGATTACGAAGAGGAGGACTATTCG
TATTATCTTTGTATTGAAACCTATCAAAGCCTAGAAAAGGCTCGAAATAGATATTCCTCGTATCAAGGAACCAATAAAAA
CACGATTTTTGAATGTAATCTAGAAACTATGTATAGAATTTATTCTAAAGGATCGTTTGAGAGAGTGGTGGAGCGTGTGA
TGAACGGAGAAGGTTTTCGTAAGAAAGAAAAATTATCCCCGTTTTTTTTCGTTCATGCAGAACACGATTCCGGAAACGAG
TTTGGGATCGAACGGAGCATTTCATCTTCTTGA

Upstream 100 bases:

>100_bases
GGATTCTTTTTCGGATTTACTATGTTAAAAAAACTAAAATAAAAGTTATGAAAGAGTTTTTAGAAAGATTCATCAAACGC
AGAAAAAGGATTCAAAACAA

Downstream 100 bases:

>100_bases
ATGAGAGAGATTTTGTAATCGAAGAATGACTATTTAGAATTGAAGAGGAGAACGGAATTTCACTAGGACCTATCTTCTGT
TTTTTCGAATCGATGGATCA

Product: ankyrin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MQDLLLKAISAEDELQIQELIAKGADPNQMIYVRSLKVPLWFSALPISFSGGVKFKSNALRALLSSGADLNALSNSGESA
METLLYYCKDDTRFEESAKALLDAGIDLNAHKEESSSILRSAVYAKTASVRKVSFLLQAGADVNLADKKNGETPLIRACI
DSDTNGEVMLEIVRLLIRAGADVNAQETWKGWSSLMWVAKHGNMEVAKLLAGANLKAESLKGDTNSYLIAYENKHQDFVS
WLEEQGAKDTSDRMFRILQRDYIQKSAWSESVDAGLKAIKAFPEDGIVCNHLSFAYRNLGRYEDSVSWARRSLSFSFDLE
ALNLLIANYIHLQKSDLAILECKKYRTQILESGKDIGQVFTNLLVAYFIENRSQEAIDFLGDPWKIQTQESVFFLNLACI
YVKLENHSSAIRSLFEAVRLKYPIEKLKKDEDLKPLTENTAFQILLKGNFERLESETFFLENDCVELVRDRLQVEERKMF
EGKEIQRTRFEFSLPYEVLLKYAEFKDHYIQSGWELKSDRLSPVEEDLVVELDDVLKKFQTDQKIGAILLEWDYEEEDYS
YYLCIETYQSLEKARNRYSSYQGTNKNTIFECNLETMYRIYSKGSFERVVERVMNGEGFRKKEKLSPFFFVHAEHDSGNE
FGIERSISSS

Sequences:

>Translated_650_residues
MQDLLLKAISAEDELQIQELIAKGADPNQMIYVRSLKVPLWFSALPISFSGGVKFKSNALRALLSSGADLNALSNSGESA
METLLYYCKDDTRFEESAKALLDAGIDLNAHKEESSSILRSAVYAKTASVRKVSFLLQAGADVNLADKKNGETPLIRACI
DSDTNGEVMLEIVRLLIRAGADVNAQETWKGWSSLMWVAKHGNMEVAKLLAGANLKAESLKGDTNSYLIAYENKHQDFVS
WLEEQGAKDTSDRMFRILQRDYIQKSAWSESVDAGLKAIKAFPEDGIVCNHLSFAYRNLGRYEDSVSWARRSLSFSFDLE
ALNLLIANYIHLQKSDLAILECKKYRTQILESGKDIGQVFTNLLVAYFIENRSQEAIDFLGDPWKIQTQESVFFLNLACI
YVKLENHSSAIRSLFEAVRLKYPIEKLKKDEDLKPLTENTAFQILLKGNFERLESETFFLENDCVELVRDRLQVEERKMF
EGKEIQRTRFEFSLPYEVLLKYAEFKDHYIQSGWELKSDRLSPVEEDLVVELDDVLKKFQTDQKIGAILLEWDYEEEDYS
YYLCIETYQSLEKARNRYSSYQGTNKNTIFECNLETMYRIYSKGSFERVVERVMNGEGFRKKEKLSPFFFVHAEHDSGNE
FGIERSISSS
>Mature_650_residues
MQDLLLKAISAEDELQIQELIAKGADPNQMIYVRSLKVPLWFSALPISFSGGVKFKSNALRALLSSGADLNALSNSGESA
METLLYYCKDDTRFEESAKALLDAGIDLNAHKEESSSILRSAVYAKTASVRKVSFLLQAGADVNLADKKNGETPLIRACI
DSDTNGEVMLEIVRLLIRAGADVNAQETWKGWSSLMWVAKHGNMEVAKLLAGANLKAESLKGDTNSYLIAYENKHQDFVS
WLEEQGAKDTSDRMFRILQRDYIQKSAWSESVDAGLKAIKAFPEDGIVCNHLSFAYRNLGRYEDSVSWARRSLSFSFDLE
ALNLLIANYIHLQKSDLAILECKKYRTQILESGKDIGQVFTNLLVAYFIENRSQEAIDFLGDPWKIQTQESVFFLNLACI
YVKLENHSSAIRSLFEAVRLKYPIEKLKKDEDLKPLTENTAFQILLKGNFERLESETFFLENDCVELVRDRLQVEERKMF
EGKEIQRTRFEFSLPYEVLLKYAEFKDHYIQSGWELKSDRLSPVEEDLVVELDDVLKKFQTDQKIGAILLEWDYEEEDYS
YYLCIETYQSLEKARNRYSSYQGTNKNTIFECNLETMYRIYSKGSFERVVERVMNGEGFRKKEKLSPFFFVHAEHDSGNE
FGIERSISSS

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI38683816, Length=190, Percent_Identity=34.2105263157895, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI38683807, Length=190, Percent_Identity=34.2105263157895, Blast_Score=71, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 74414; Mature: 74414

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLLLKAISAEDELQIQELIAKGADPNQMIYVRSLKVPLWFSALPISFSGGVKFKSNAL
CHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCEEECCCCEEHHHHH
RALLSSGADLNALSNSGESAMETLLYYCKDDTRFEESAKALLDAGIDLNAHKEESSSILR
HHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
SAVYAKTASVRKVSFLLQAGADVNLADKKNGETPLIRACIDSDTNGEVMLEIVRLLIRAG
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
ADVNAQETWKGWSSLMWVAKHGNMEVAKLLAGANLKAESLKGDTNSYLIAYENKHQDFVS
CCCCHHHHHHHHHHHEEEHCCCCHHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCHHHHH
WLEEQGAKDTSDRMFRILQRDYIQKSAWSESVDAGLKAIKAFPEDGIVCNHLSFAYRNLG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHC
RYEDSVSWARRSLSFSFDLEALNLLIANYIHLQKSDLAILECKKYRTQILESGKDIGQVF
CCHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
TNLLVAYFIENRSQEAIDFLGDPWKIQTQESVFFLNLACIYVKLENHSSAIRSLFEAVRL
HHHHHHHHHHCCCHHHHHHCCCCCEEECCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHH
KYPIEKLKKDEDLKPLTENTAFQILLKGNFERLESETFFLENDCVELVRDRLQVEERKMF
HCCHHHCCCCCCCCCCCCCCEEEEEEECCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHC
EGKEIQRTRFEFSLPYEVLLKYAEFKDHYIQSGWELKSDRLSPVEEDLVVELDDVLKKFQ
CCCHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
TDQKIGAILLEWDYEEEDYSYYLCIETYQSLEKARNRYSSYQGTNKNTIFECNLETMYRI
CCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHH
YSKGSFERVVERVMNGEGFRKKEKLSPFFFVHAEHDSGNEFGIERSISSS
HCCCCHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDLLLKAISAEDELQIQELIAKGADPNQMIYVRSLKVPLWFSALPISFSGGVKFKSNAL
CHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCEEECCCCEEHHHHH
RALLSSGADLNALSNSGESAMETLLYYCKDDTRFEESAKALLDAGIDLNAHKEESSSILR
HHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
SAVYAKTASVRKVSFLLQAGADVNLADKKNGETPLIRACIDSDTNGEVMLEIVRLLIRAG
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
ADVNAQETWKGWSSLMWVAKHGNMEVAKLLAGANLKAESLKGDTNSYLIAYENKHQDFVS
CCCCHHHHHHHHHHHEEEHCCCCHHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCHHHHH
WLEEQGAKDTSDRMFRILQRDYIQKSAWSESVDAGLKAIKAFPEDGIVCNHLSFAYRNLG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHC
RYEDSVSWARRSLSFSFDLEALNLLIANYIHLQKSDLAILECKKYRTQILESGKDIGQVF
CCHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
TNLLVAYFIENRSQEAIDFLGDPWKIQTQESVFFLNLACIYVKLENHSSAIRSLFEAVRL
HHHHHHHHHHCCCHHHHHHCCCCCEEECCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHH
KYPIEKLKKDEDLKPLTENTAFQILLKGNFERLESETFFLENDCVELVRDRLQVEERKMF
HCCHHHCCCCCCCCCCCCCCEEEEEEECCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHC
EGKEIQRTRFEFSLPYEVLLKYAEFKDHYIQSGWELKSDRLSPVEEDLVVELDDVLKKFQ
CCCHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
TDQKIGAILLEWDYEEEDYSYYLCIETYQSLEKARNRYSSYQGTNKNTIFECNLETMYRI
CCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHH
YSKGSFERVVERVMNGEGFRKKEKLSPFFFVHAEHDSGNEFGIERSISSS
HCCCCHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA