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The map label for this gene is capA [H]

Identifier: 45657962

GI number: 45657962

Start: 2554320

End: 2555549

Strand: Reverse

Name: capA [H]

Synonym: LIC12114

Alternate gene names: 45657962

Gene position: 2555549-2554320 (Counterclockwise)

Preceding gene: 45657963

Following gene: 45657961

Centisome position: 59.75

GC content: 37.97

Gene sequence:

>1230_bases
GTGCTTTTTTTGTTCCCGATTCTTCGAAGGTTTCGAATTTTAATACTGAAGCTTTTTGGATTCTGCTTCTTCTGCGGATT
GGGACTTCTTTCCTGTCTTCCTGGATTTTTAAAGGAGTCTAGTACCGAAAATTCTCAGGTCAATTCATCATCTACTTTTG
AGACTCTTCAAGACAAGATCGATTCCGTTTTACACCCAGATCATAATCAAGATCCAGGGCTTCTCAAGTTACTTGCTGGA
GGAGACGTTATGTTCAATTGGGGTATTCGGGATACAATTCGTAAACACGGAGAGATTGCGCCGGTAGAAGGTCTTAGACC
ACTTTTTAATGAAGCAGACTTTAGAATGATCAATTTGGAAACTCCGATAGTTGCTTCTAAGACGGAAGAATCTAAAAAAG
CTTATATATTTACGGCCCACGAAAAAGATTTAAATTCTCTCAAATATTTGGGAGTGGATATGGTATTTTTAGGAAATAAT
CATTCCTTTGATCATGGGCAACAAGGAATGAACGAGACTTTAGATATATTAAATAAAAATAATATTTTATTTGTAGGCGC
GGGAAAAAAACTTCCTGAAGTCTTAGAACCTTTAAATCTAAATCTAAAAGGTTCGGATCTGCGAATCCATTCCGTGACCG
CAATCGCCGAACAGACTCACTATGCTACTGCGACAAGATCTGGAGTGGCTCCTTTTTTATTTCCTTCTTTGAGAGCTACG
TTTTTTGAAAAAAATATTCTTCCTAAAAATCATTCTACTCCGGTTCGTATTGTTTCTTTACACTGGGGTGTGGAATATTC
TCCGTTTCCGACCTCAGATCAAAGAAAAATAGCGAGATCCTTGATCGATTCCGGCGTAAAGATAGTGATCGGTCATCATC
CTCATATTCCTCAGGGTGTGGAAGTTTATAAAGGAGGGGTGATTTTGTATTCTTTAGGAAATTTGATTTTTGGAAGTAGA
AATTCTTACCTCAATCACAATTTGATCGCTATTTTGCATATTCGTAATAATCATTTAGAACGTGTTGAGCTGGTACCTAT
TTTCGGAAAATTCCAAAAAGAAGATCATAAGATCCGACCTGTAAAGGGAGTAGAAGCACAGGAGTTCTTACATGAAATTG
CAGTTCTTTCTGCTGAACTGGGAACAAAACTCAGGGTAGAAGGAGATAGAGCCTTTCTAGATCTTCCGACAAATTCTACC
TTGACCCCTGTCTCTAAACGCAAAAAATAG

Upstream 100 bases:

>100_bases
TAGATTTTGATTTGAATTTTTCAAACGCAGAGAAAGTAAAAGGCGATTCTCTCGAAAAAAAATCTTTCCAATCCTAAGCG
AATGGAATAGTTTAGCACCA

Downstream 100 bases:

>100_bases
GCTAAATTATCGGTTCTTCTGCTCGTCGCAAACCGCAGACGGGCTATAACCATAGGAGAAACTTTTGAGAAACTACGAAC
TCACCACAATTACACGTGTG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MLFLFPILRRFRILILKLFGFCFFCGLGLLSCLPGFLKESSTENSQVNSSSTFETLQDKIDSVLHPDHNQDPGLLKLLAG
GDVMFNWGIRDTIRKHGEIAPVEGLRPLFNEADFRMINLETPIVASKTEESKKAYIFTAHEKDLNSLKYLGVDMVFLGNN
HSFDHGQQGMNETLDILNKNNILFVGAGKKLPEVLEPLNLNLKGSDLRIHSVTAIAEQTHYATATRSGVAPFLFPSLRAT
FFEKNILPKNHSTPVRIVSLHWGVEYSPFPTSDQRKIARSLIDSGVKIVIGHHPHIPQGVEVYKGGVILYSLGNLIFGSR
NSYLNHNLIAILHIRNNHLERVELVPIFGKFQKEDHKIRPVKGVEAQEFLHEIAVLSAELGTKLRVEGDRAFLDLPTNST
LTPVSKRKK

Sequences:

>Translated_409_residues
MLFLFPILRRFRILILKLFGFCFFCGLGLLSCLPGFLKESSTENSQVNSSSTFETLQDKIDSVLHPDHNQDPGLLKLLAG
GDVMFNWGIRDTIRKHGEIAPVEGLRPLFNEADFRMINLETPIVASKTEESKKAYIFTAHEKDLNSLKYLGVDMVFLGNN
HSFDHGQQGMNETLDILNKNNILFVGAGKKLPEVLEPLNLNLKGSDLRIHSVTAIAEQTHYATATRSGVAPFLFPSLRAT
FFEKNILPKNHSTPVRIVSLHWGVEYSPFPTSDQRKIARSLIDSGVKIVIGHHPHIPQGVEVYKGGVILYSLGNLIFGSR
NSYLNHNLIAILHIRNNHLERVELVPIFGKFQKEDHKIRPVKGVEAQEFLHEIAVLSAELGTKLRVEGDRAFLDLPTNST
LTPVSKRKK
>Mature_409_residues
MLFLFPILRRFRILILKLFGFCFFCGLGLLSCLPGFLKESSTENSQVNSSSTFETLQDKIDSVLHPDHNQDPGLLKLLAG
GDVMFNWGIRDTIRKHGEIAPVEGLRPLFNEADFRMINLETPIVASKTEESKKAYIFTAHEKDLNSLKYLGVDMVFLGNN
HSFDHGQQGMNETLDILNKNNILFVGAGKKLPEVLEPLNLNLKGSDLRIHSVTAIAEQTHYATATRSGVAPFLFPSLRAT
FFEKNILPKNHSTPVRIVSLHWGVEYSPFPTSDQRKIARSLIDSGVKIVIGHHPHIPQGVEVYKGGVILYSLGNLIFGSR
NSYLNHNLIAILHIRNNHLERVELVPIFGKFQKEDHKIRPVKGVEAQEFLHEIAVLSAELGTKLRVEGDRAFLDLPTNST
LTPVSKRKK

Specific function: Seems to be required for maximum PGA (gamma-polyglutamic acid) production [H]

COG id: COG2843

COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019079 [H]

Pfam domain/function: PF09587 PGA_cap [H]

EC number: NA

Molecular weight: Translated: 45900; Mature: 45900

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLFPILRRFRILILKLFGFCFFCGLGLLSCLPGFLKESSTENSQVNSSSTFETLQDKI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
DSVLHPDHNQDPGLLKLLAGGDVMFNWGIRDTIRKHGEIAPVEGLRPLFNEADFRMINLE
HHHHCCCCCCCCCEEEEEECCCEEEECCHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEC
TPIVASKTEESKKAYIFTAHEKDLNSLKYLGVDMVFLGNNHSFDHGQQGMNETLDILNKN
CCEEECCCCCCCEEEEEEECCCCCCHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHCCC
NILFVGAGKKLPEVLEPLNLNLKGSDLRIHSVTAIAEQTHYATATRSGVAPFLFPSLRAT
CEEEEECCCCCHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FFEKNILPKNHSTPVRIVSLHWGVEYSPFPTSDQRKIARSLIDSGVKIVIGHHPHIPQGV
HHHHCCCCCCCCCCEEEEEEEECCEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC
EVYKGGVILYSLGNLIFGSRNSYLNHNLIAILHIRNNHLERVELVPIFGKFQKEDHKIRP
CEECCCEEEEECCCHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCC
VKGVEAQEFLHEIAVLSAELGTKLRVEGDRAFLDLPTNSTLTPVSKRKK
CCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCHHHCCC
>Mature Secondary Structure
MLFLFPILRRFRILILKLFGFCFFCGLGLLSCLPGFLKESSTENSQVNSSSTFETLQDKI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
DSVLHPDHNQDPGLLKLLAGGDVMFNWGIRDTIRKHGEIAPVEGLRPLFNEADFRMINLE
HHHHCCCCCCCCCEEEEEECCCEEEECCHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEC
TPIVASKTEESKKAYIFTAHEKDLNSLKYLGVDMVFLGNNHSFDHGQQGMNETLDILNKN
CCEEECCCCCCCEEEEEEECCCCCCHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHCCC
NILFVGAGKKLPEVLEPLNLNLKGSDLRIHSVTAIAEQTHYATATRSGVAPFLFPSLRAT
CEEEEECCCCCHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FFEKNILPKNHSTPVRIVSLHWGVEYSPFPTSDQRKIARSLIDSGVKIVIGHHPHIPQGV
HHHHCCCCCCCCCCEEEEEEEECCEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC
EVYKGGVILYSLGNLIFGSRNSYLNHNLIAILHIRNNHLERVELVPIFGKFQKEDHKIRP
CEECCCEEEEECCCHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCC
VKGVEAQEFLHEIAVLSAELGTKLRVEGDRAFLDLPTNSTLTPVSKRKK
CCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 10486244; 11751809; 9384377 [H]