Click here to switch to the map view.

The map label for this gene is yjjU [H]

Identifier: 45657912

GI number: 45657912

Start: 2499203

End: 2500201

Strand: Direct

Name: yjjU [H]

Synonym: LIC12064

Alternate gene names: 45657912

Gene position: 2499203-2500201 (Clockwise)

Preceding gene: 45657911

Following gene: 45657914

Centisome position: 58.43

GC content: 37.04

Gene sequence:

>999_bases
ATGAAAATTCCAATAGCCAAAGGTAGCAAACGTGCTCTTCTTGTTGAAGGAGGTGGTATGAAAGGAGCTTTTGCAGGAGG
TGCGTTACATTCTCTGCATACAATAGTATCTCCAAAACATTTCGATTTAGTAGTTGCGGTATCCTCCGGTGCTTGTTCCG
CCGCGTATTACGTTACGATGCCAGAACCGGAACCAGAAAAAAGTCTCAAAACTTTAGCAATTTGGTATATAGAACTGGCA
GGAAGAAAACTCATATCTCCCTTTCATCCTTTTTTAGGAAAAACTTTTTTAGACCAAGAATATCTTGTAGATGACTTGTT
TGGGCAAAAGTATCCTTTGCCCGCAGAAAATTTTGAAAAATTCGGTTTACCAGAATTGAGAATCGCAGTCAGTAATTTAC
AAACCAGAACAATCGAATATGTGCGAGCTACTTCCTCCAACATATTCGATCTTTTAAAAGCGGCAACCTCTCTTCCAATA
GCAACCAGAGGAAAACACAAAGTAGATGGAAAATTATATACAGATGCTGCCGTTCTCAATCCACTTCCTCTTGAAGATTT
AATAGAGGCAGGATACAAAGATATTACGGTAGTTTTAAATTCTCCTGTGGAAAGAATTTCTCCTCCGTTTAGTATGTTGA
CTAGTCTTCTGTCTTTTCCAAAAGACTGGAAAATGGCAAAGCTAATGAATAGATGGCATCATCATCATTTTAATCTAGCA
AGAGCGGTAGCGCAAAAACCTCCCAAAGGAGTGCGAATCCATACTATCTCCCCTGAAAACCCTCTTCCAGTAAGTTTAGT
CACTACTAATGCAAATAAACTAAAAGAGGCAGTAAATCTAGGAGTTTCCAAAGGAGAAGAAATCGGAAAACTACTATTAA
AACTTTTTACAAAAAATCAAAACTCAAAAAAGGATTCTTTTACTGGAACAACTCTAAAACAAACTCGAAATTCTAATCTA
AAAAAGAAACCTGCCACTAAAAGAAAAAAATCGAAATAA

Upstream 100 bases:

>100_bases
GTATGCACGAAATTGCAAGTCTTACAAATCTTATATATCCATTTGAATTCAAAAAATCTAAATTAGAAAATTTTGAAGAA
TCCGAGGTAGAATCCGTAAT

Downstream 100 bases:

>100_bases
AGTTTTGTATCTTTGTTTTTAAGGTTTTATAAAATAAAAATTTTCCAAGATCTTATAAATGTCTTTATAAGTGATTTAGT
TTATTATAATAAACGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKIPIAKGSKRALLVEGGGMKGAFAGGALHSLHTIVSPKHFDLVVAVSSGACSAAYYVTMPEPEPEKSLKTLAIWYIELA
GRKLISPFHPFLGKTFLDQEYLVDDLFGQKYPLPAENFEKFGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPI
ATRGKHKVDGKLYTDAAVLNPLPLEDLIEAGYKDITVVLNSPVERISPPFSMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
RAVAQKPPKGVRIHTISPENPLPVSLVTTNANKLKEAVNLGVSKGEEIGKLLLKLFTKNQNSKKDSFTGTTLKQTRNSNL
KKKPATKRKKSK

Sequences:

>Translated_332_residues
MKIPIAKGSKRALLVEGGGMKGAFAGGALHSLHTIVSPKHFDLVVAVSSGACSAAYYVTMPEPEPEKSLKTLAIWYIELA
GRKLISPFHPFLGKTFLDQEYLVDDLFGQKYPLPAENFEKFGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPI
ATRGKHKVDGKLYTDAAVLNPLPLEDLIEAGYKDITVVLNSPVERISPPFSMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
RAVAQKPPKGVRIHTISPENPLPVSLVTTNANKLKEAVNLGVSKGEEIGKLLLKLFTKNQNSKKDSFTGTTLKQTRNSNL
KKKPATKRKKSK
>Mature_332_residues
MKIPIAKGSKRALLVEGGGMKGAFAGGALHSLHTIVSPKHFDLVVAVSSGACSAAYYVTMPEPEPEKSLKTLAIWYIELA
GRKLISPFHPFLGKTFLDQEYLVDDLFGQKYPLPAENFEKFGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPI
ATRGKHKVDGKLYTDAAVLNPLPLEDLIEAGYKDITVVLNSPVERISPPFSMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
RAVAQKPPKGVRIHTISPENPLPVSLVTTNANKLKEAVNLGVSKGEEIGKLLLKLFTKNQNSKKDSFTGTTLKQTRNSNL
KKKPATKRKKSK

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=292, Percent_Identity=23.6301369863014, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36702; Mature: 36702

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPIAKGSKRALLVEGGGMKGAFAGGALHSLHTIVSPKHFDLVVAVSSGACSAAYYVTM
CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEC
PEPEPEKSLKTLAIWYIELAGRKLISPFHPFLGKTFLDQEYLVDDLFGQKYPLPAENFEK
CCCCHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH
FGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPIATRGKHKVDGKLYTDAAVLN
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCC
PLPLEDLIEAGYKDITVVLNSPVERISPPFSMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
CCCHHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RAVAQKPPKGVRIHTISPENPLPVSLVTTNANKLKEAVNLGVSKGEEIGKLLLKLFTKNQ
HHHHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
NSKKDSFTGTTLKQTRNSNLKKKPATKRKKSK
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIPIAKGSKRALLVEGGGMKGAFAGGALHSLHTIVSPKHFDLVVAVSSGACSAAYYVTM
CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEC
PEPEPEKSLKTLAIWYIELAGRKLISPFHPFLGKTFLDQEYLVDDLFGQKYPLPAENFEK
CCCCHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH
FGLPELRIAVSNLQTRTIEYVRATSSNIFDLLKAATSLPIATRGKHKVDGKLYTDAAVLN
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCC
PLPLEDLIEAGYKDITVVLNSPVERISPPFSMLTSLLSFPKDWKMAKLMNRWHHHHFNLA
CCCHHHHHHCCCCEEEEEECCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RAVAQKPPKGVRIHTISPENPLPVSLVTTNANKLKEAVNLGVSKGEEIGKLLLKLFTKNQ
HHHHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
NSKKDSFTGTTLKQTRNSNLKKKPATKRKKSK
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]