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The map label for this gene is 45657914

Identifier: 45657914

GI number: 45657914

Start: 2500970

End: 2501446

Strand: Direct

Name: 45657914

Synonym: LIC12066

Alternate gene names: NA

Gene position: 2500970-2501446 (Clockwise)

Preceding gene: 45657912

Following gene: 45657921

Centisome position: 58.47

GC content: 34.38

Gene sequence:

>477_bases
TTGCAATTGCAACTAAAAAATTACATTCTATTCTTAATGAATGAAAAATTATCAGAACAATCGATTCAGGCTTGGGCGGC
AGGCCTAAAATTTTACAGCTCAGCTTCCTCCCAAATAGAATCCGCTCTTGCCAAAACAAACGCAATTTCTCTTACTTGGT
ACGACATACTTTATACGGTTTACACAAAATCTAAAAAACGTTCTAGAATGTCGGATATAGCCCGGGAAATCATACTAAGT
AAAAGCGCTTTGACTCGTTCTGTAGATAAACTAGTCACTGAAGGTTTTTTAAAAAGGGAAAAAAGCGAAGAAGATGCTAG
AGAATTTATCGTAGAAATCACATTTTCCGGAATTCAAGCACTTAGAAATTCATGGCCGATTTACGAAGAAGGAATTCGAG
AAATTTTCGCATCCAAACTGACTTTTAAAGAAACCAGCGAACTTTTAAGGATTTTTAGAAAATTGAATAAATATTAA

Upstream 100 bases:

>100_bases
CTTTGTGCGTTCATTTGTTACTCCTTTTGAATTCTTGCCGGGTAAAATTCGGAAAGAATTTTAGTTGCAATTACAACTAT
TTCATATTCTAAAAAAATGA

Downstream 100 bases:

>100_bases
AAAAATATAATATAAAAACTCATACCTTTAGAAAAAATCTTTCCAACTTTATTTTACGGAAACTTTAATCGTTTTCATCA
AACCATAAAGAAGGAGAAAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MQLQLKNYILFLMNEKLSEQSIQAWAAGLKFYSSASSQIESALAKTNAISLTWYDILYTVYTKSKKRSRMSDIAREIILS
KSALTRSVDKLVTEGFLKREKSEEDAREFIVEITFSGIQALRNSWPIYEEGIREIFASKLTFKETSELLRIFRKLNKY

Sequences:

>Translated_158_residues
MQLQLKNYILFLMNEKLSEQSIQAWAAGLKFYSSASSQIESALAKTNAISLTWYDILYTVYTKSKKRSRMSDIAREIILS
KSALTRSVDKLVTEGFLKREKSEEDAREFIVEITFSGIQALRNSWPIYEEGIREIFASKLTFKETSELLRIFRKLNKY
>Mature_158_residues
MQLQLKNYILFLMNEKLSEQSIQAWAAGLKFYSSASSQIESALAKTNAISLTWYDILYTVYTKSKKRSRMSDIAREIILS
KSALTRSVDKLVTEGFLKREKSEEDAREFIVEITFSGIQALRNSWPIYEEGIREIFASKLTFKETSELLRIFRKLNKY

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18384; Mature: 18384

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQLKNYILFLMNEKLSEQSIQAWAAGLKFYSSASSQIESALAKTNAISLTWYDILYTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YTKSKKRSRMSDIAREIILSKSALTRSVDKLVTEGFLKREKSEEDAREFIVEITFSGIQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LRNSWPIYEEGIREIFASKLTFKETSELLRIFRKLNKY
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLQLKNYILFLMNEKLSEQSIQAWAAGLKFYSSASSQIESALAKTNAISLTWYDILYTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YTKSKKRSRMSDIAREIILSKSALTRSVDKLVTEGFLKREKSEEDAREFIVEITFSGIQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LRNSWPIYEEGIREIFASKLTFKETSELLRIFRKLNKY
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA