Click here to switch to the map view.

The map label for this gene is 45657769

Identifier: 45657769

GI number: 45657769

Start: 2305267

End: 2305737

Strand: Direct

Name: 45657769

Synonym: LIC11909

Alternate gene names: NA

Gene position: 2305267-2305737 (Clockwise)

Preceding gene: 45657768

Following gene: 45657770

Centisome position: 53.9

GC content: 33.55

Gene sequence:

>471_bases
ATGCTCCATCAATTAAAGCTACTTTTAGAAAAGGGAACCTCCTACTCTGAAACTAAAAAATTTGACGTGGAAGTTCTTTT
AAATTCAAGACTAGCACCGGACCAATTTCATTTCATCAGGCAAATTCAAATCGTATGTGACACTGCAAAATTAGGAGTTT
CCCGCCTAACAGGAAAAGACGCTCCAAAACATGAAGACCAAGAAAAAACATTATCAGAATTACAAACAAGAATTGATTCC
ACGTTAGATTACCTTTCAACGTTTACAGAAAAAGATTTTTTAGAAGCAAATGATAGAAAAGTATTCAATCCTCGTTGGGA
AGGGAAATATTTAACCGGAAAAGAATTTGCAATTCAACATTTGATACCTAATTTCTATTTTCATATTACTACCGCCTATT
CAATTCTCCGTCATAATGGCGTAGATATAGGAAAGAAAAACTACCTAGGTGAAATGCCTTTTAAAAGTTAA

Upstream 100 bases:

>100_bases
TCACAAGAAAAGCCCTTCAAAAAAATGAAAAAAACGCTGATTCTAAAAAAGGAAAACAAAACGTATGCTTTTCGAAATCA
CAATCCAACAATTTTCTAAA

Downstream 100 bases:

>100_bases
AATAATCGACGACGAATTTTTTGGAATTTCTTTTTAATAAAATATTCAAGAATCAGAATTTTTGGATCGGAATTTTATTT
TTTTCATTGAACGTTTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLHQLKLLLEKGTSYSETKKFDVEVLLNSRLAPDQFHFIRQIQIVCDTAKLGVSRLTGKDAPKHEDQEKTLSELQTRIDS
TLDYLSTFTEKDFLEANDRKVFNPRWEGKYLTGKEFAIQHLIPNFYFHITTAYSILRHNGVDIGKKNYLGEMPFKS

Sequences:

>Translated_156_residues
MLHQLKLLLEKGTSYSETKKFDVEVLLNSRLAPDQFHFIRQIQIVCDTAKLGVSRLTGKDAPKHEDQEKTLSELQTRIDS
TLDYLSTFTEKDFLEANDRKVFNPRWEGKYLTGKEFAIQHLIPNFYFHITTAYSILRHNGVDIGKKNYLGEMPFKS
>Mature_156_residues
MLHQLKLLLEKGTSYSETKKFDVEVLLNSRLAPDQFHFIRQIQIVCDTAKLGVSRLTGKDAPKHEDQEKTLSELQTRIDS
TLDYLSTFTEKDFLEANDRKVFNPRWEGKYLTGKEFAIQHLIPNFYFHITTAYSILRHNGVDIGKKNYLGEMPFKS

Specific function: Unknown

COG id: COG3812

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18141; Mature: 18141

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQLKLLLEKGTSYSETKKFDVEVLLNSRLAPDQFHFIRQIQIVCDTAKLGVSRLTGKD
CHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
APKHEDQEKTLSELQTRIDSTLDYLSTFTEKDFLEANDRKVFNPRWEGKYLTGKEFAIQH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECCHHHHHHH
LIPNFYFHITTAYSILRHNGVDIGKKNYLGEMPFKS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLHQLKLLLEKGTSYSETKKFDVEVLLNSRLAPDQFHFIRQIQIVCDTAKLGVSRLTGKD
CHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
APKHEDQEKTLSELQTRIDSTLDYLSTFTEKDFLEANDRKVFNPRWEGKYLTGKEFAIQH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECCHHHHHHH
LIPNFYFHITTAYSILRHNGVDIGKKNYLGEMPFKS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA