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The map label for this gene is ylbK [H]

Identifier: 45657615

GI number: 45657615

Start: 2135434

End: 2137215

Strand: Reverse

Name: ylbK [H]

Synonym: LIC11749

Alternate gene names: 45657615

Gene position: 2137215-2135434 (Counterclockwise)

Preceding gene: 45657618

Following gene: 45657608

Centisome position: 49.97

GC content: 35.02

Gene sequence:

>1782_bases
TTGAGTTTTATGGCACGAAAAATTCATCCCGAAATTTTAAAGTTTCTTTCTGGAATATCTTTGTTTCAAAAATTATCCCC
AGCTGTTCTAACTCGTATTTATCAAAATATCGAAGAAAGAAACATATATAATCATGATGTAATCTATTATAGAGGAGATA
TTTCAGATAAACTTTTTATAGTCAGACATGGCGAGGTAATGCTTACTTTCGGAGAATCTGGAAAATCAGTAAAGTATTTG
GGTGAGGGAGAATTTTTTGCAGAAAATAGTCTCATGACCAGAACACAACACGCAGGTTCTGCGATTGCTGTGATGGATAC
TTTACTTTATGTTTTGGATGGACATTTTTTTTTAGAGCTAGCCCAAAAAGAACCAATTCTTTCCGGAAATTTAATTCGTT
TGATGAGCAATCGATTTAGAGAACATCTAGAACCAGATAATAAAATAACATCCCTTCCCAGAAGGATGATTTGTCATGTT
CCTTTGGAAGAAGTACAAGGTTATAAAGAAAAGTTAGATGCGATCGTTGAGATAGGAGGTTATTCCCACGTTGGAAAGAT
GACTTTAGTTCCCATGGAGTCCTTCGAAAAGGTCAGCCTACAAGACGCAATTCGAAAATTATCCTTACTCAGAAATAAAT
TTCCAATTATTCATTTATATTTTCAACAAGTAGGTTTAAAACCTGAATTTGATAAACTACTTTTGCAAGCGGATCAGATT
GTTTTTTGGGAAGATAATCCAGAACGTAACCAAAAGAAAAAAACTGAAATTATATCTTATTTCCGATCTAGAATCCGTAA
TTTTGCGGGAAGAACGATTCGTTATGTAGATTCCGTCAATTCTATACGACCAGAAGACAGTGTAAAACATCAAAAAATAT
TTCATAAAGAAGAAACTTTCTCTAGATATCTTGTGTCCAGAATGAGAGGACTCGCTTTAGGAGGGGGAGGGGCAAGAGCT
CTTGCACATGTCGGGCTTTTAAAAGCATTAGAAAAAGAGAATATTAAAGTCGACGTGGTTTCTGGAGCTTCTTTTGGAGC
AGTAATTGCAGCCTTGTATGCTCGTGGAGAAAATACGGAAACGATCTATAAAATGATCTATAAATTTTTTGGAGGATTGG
ACAAACCTTTTGATCCTACAATTCCACTTGTTTCCTTTTTTAAAGGTAAAAAAATGATTCGAATGTTGAAACAAGCGTTC
GGTTCGACGCTGATTGAAGACTTAAAAATCCCTTTTGTAACATCCGCAGTAGATCTTCATAGTGGAGAGGAATATGTGAT
GGATCGTGGACCTGTCTGGGAAGCGTTAGCTGCGGCGATGAGTTTGCCTGGAATGTTTCCTCCTATCTTTCACGGAGATC
ATCTGCTCGTAGACGGGGGAGTGATCAATAACGTTCCAGAAAGTCTAATTAGACAAAAAGGAGCAGATATTATTTTATCC
GTAAATGTTTCTCCTCTGAGAGACGAGGCAATTGTAAGACTTTTAGAAGATAGAAAGATCACAGGAAAATCTTTTTTTAA
GAATCTTTGGGAAGATTTAAAATATCCGCCTATCCTCAAAATTATGGGAAGAGCAATCACGTTAGAAGGAAGGGAGATCA
CAAAACTTAGAAAAGATAAAATGGATTTATTTATCAATCTTCATATAGAAGAATTTTCCTTTTTTGATTTTAATAAGTTT
AGGGAAATTATTCGCAAAGGAGAAGAAGAAGCAGAAAAACATCTCGAAGAAATCTACGATTTATTTTATCCAGGAAAAAA
ATTCTTAAAGAAAAAAAGATAA

Upstream 100 bases:

>100_bases
ACAAGCCAGAAAATCAAGAGAAAAGCGCATCAAGAAACGTGATTGTAGAATGATCTATTGAGAAATTCTTTACTTTCTCG
TCTTATTAAAATAGAGTCAT

Downstream 100 bases:

>100_bases
AAGAAATTCCTGAAGTTTTGCGGATTCCTTTTTATAATTGAATTTCCATTCTTCACTTCCTAGAGGTCCAACGGTATTTG
TTAATGCAAAAAAAGAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MSFMARKIHPEILKFLSGISLFQKLSPAVLTRIYQNIEERNIYNHDVIYYRGDISDKLFIVRHGEVMLTFGESGKSVKYL
GEGEFFAENSLMTRTQHAGSAIAVMDTLLYVLDGHFFLELAQKEPILSGNLIRLMSNRFREHLEPDNKITSLPRRMICHV
PLEEVQGYKEKLDAIVEIGGYSHVGKMTLVPMESFEKVSLQDAIRKLSLLRNKFPIIHLYFQQVGLKPEFDKLLLQADQI
VFWEDNPERNQKKKTEIISYFRSRIRNFAGRTIRYVDSVNSIRPEDSVKHQKIFHKEETFSRYLVSRMRGLALGGGGARA
LAHVGLLKALEKENIKVDVVSGASFGAVIAALYARGENTETIYKMIYKFFGGLDKPFDPTIPLVSFFKGKKMIRMLKQAF
GSTLIEDLKIPFVTSAVDLHSGEEYVMDRGPVWEALAAAMSLPGMFPPIFHGDHLLVDGGVINNVPESLIRQKGADIILS
VNVSPLRDEAIVRLLEDRKITGKSFFKNLWEDLKYPPILKIMGRAITLEGREITKLRKDKMDLFINLHIEEFSFFDFNKF
REIIRKGEEEAEKHLEEIYDLFYPGKKFLKKKR

Sequences:

>Translated_593_residues
MSFMARKIHPEILKFLSGISLFQKLSPAVLTRIYQNIEERNIYNHDVIYYRGDISDKLFIVRHGEVMLTFGESGKSVKYL
GEGEFFAENSLMTRTQHAGSAIAVMDTLLYVLDGHFFLELAQKEPILSGNLIRLMSNRFREHLEPDNKITSLPRRMICHV
PLEEVQGYKEKLDAIVEIGGYSHVGKMTLVPMESFEKVSLQDAIRKLSLLRNKFPIIHLYFQQVGLKPEFDKLLLQADQI
VFWEDNPERNQKKKTEIISYFRSRIRNFAGRTIRYVDSVNSIRPEDSVKHQKIFHKEETFSRYLVSRMRGLALGGGGARA
LAHVGLLKALEKENIKVDVVSGASFGAVIAALYARGENTETIYKMIYKFFGGLDKPFDPTIPLVSFFKGKKMIRMLKQAF
GSTLIEDLKIPFVTSAVDLHSGEEYVMDRGPVWEALAAAMSLPGMFPPIFHGDHLLVDGGVINNVPESLIRQKGADIILS
VNVSPLRDEAIVRLLEDRKITGKSFFKNLWEDLKYPPILKIMGRAITLEGREITKLRKDKMDLFINLHIEEFSFFDFNKF
REIIRKGEEEAEKHLEEIYDLFYPGKKFLKKKR
>Mature_592_residues
SFMARKIHPEILKFLSGISLFQKLSPAVLTRIYQNIEERNIYNHDVIYYRGDISDKLFIVRHGEVMLTFGESGKSVKYLG
EGEFFAENSLMTRTQHAGSAIAVMDTLLYVLDGHFFLELAQKEPILSGNLIRLMSNRFREHLEPDNKITSLPRRMICHVP
LEEVQGYKEKLDAIVEIGGYSHVGKMTLVPMESFEKVSLQDAIRKLSLLRNKFPIIHLYFQQVGLKPEFDKLLLQADQIV
FWEDNPERNQKKKTEIISYFRSRIRNFAGRTIRYVDSVNSIRPEDSVKHQKIFHKEETFSRYLVSRMRGLALGGGGARAL
AHVGLLKALEKENIKVDVVSGASFGAVIAALYARGENTETIYKMIYKFFGGLDKPFDPTIPLVSFFKGKKMIRMLKQAFG
STLIEDLKIPFVTSAVDLHSGEEYVMDRGPVWEALAAAMSLPGMFPPIFHGDHLLVDGGVINNVPESLIRQKGADIILSV
NVSPLRDEAIVRLLEDRKITGKSFFKNLWEDLKYPPILKIMGRAITLEGREITKLRKDKMDLFINLHIEEFSFFDFNKFR
EIIRKGEEEAEKHLEEIYDLFYPGKKFLKKKR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=278, Percent_Identity=30.5755395683453, Blast_Score=135, Evalue=2e-31,
Organism=Homo sapiens, GI260656041, Length=278, Percent_Identity=30.5755395683453, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI116256487, Length=278, Percent_Identity=30.5755395683453, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI260656043, Length=278, Percent_Identity=30.5755395683453, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI260656037, Length=278, Percent_Identity=30.5755395683453, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI148727335, Length=294, Percent_Identity=30.952380952381, Blast_Score=132, Evalue=9e-31,
Organism=Homo sapiens, GI148727290, Length=294, Percent_Identity=30.952380952381, Blast_Score=132, Evalue=9e-31,
Organism=Escherichia coli, GI226510936, Length=292, Percent_Identity=27.7397260273973, Blast_Score=114, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71997289, Length=253, Percent_Identity=29.2490118577075, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71997299, Length=253, Percent_Identity=29.2490118577075, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI193204778, Length=267, Percent_Identity=26.5917602996255, Blast_Score=107, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6323581, Length=290, Percent_Identity=29.3103448275862, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI281376913, Length=275, Percent_Identity=30.5454545454545, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI28571388, Length=275, Percent_Identity=30.1818181818182, Blast_Score=124, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 68123; Mature: 67992

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFMARKIHPEILKFLSGISLFQKLSPAVLTRIYQNIEERNIYNHDVIYYRGDISDKLFI
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEE
VRHGEVMLTFGESGKSVKYLGEGEFFAENSLMTRTQHAGSAIAVMDTLLYVLDGHFFLEL
EECCCEEEEECCCCCEEEEECCCCEEECCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
AQKEPILSGNLIRLMSNRFREHLEPDNKITSLPRRMICHVPLEEVQGYKEKLDAIVEIGG
HHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
YSHVGKMTLVPMESFEKVSLQDAIRKLSLLRNKFPIIHLYFQQVGLKPEFDKLLLQADQI
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCHHHHHHHHCCE
VFWEDNPERNQKKKTEIISYFRSRIRNFAGRTIRYVDSVNSIRPEDSVKHQKIFHKEETF
EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SRYLVSRMRGLALGGGGARALAHVGLLKALEKENIKVDVVSGASFGAVIAALYARGENTE
HHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCHH
TIYKMIYKFFGGLDKPFDPTIPLVSFFKGKKMIRMLKQAFGSTLIEDLKIPFVTSAVDLH
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCC
SGEEYVMDRGPVWEALAAAMSLPGMFPPIFHGDHLLVDGGVINNVPESLIRQKGADIILS
CCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEE
VNVSPLRDEAIVRLLEDRKITGKSFFKNLWEDLKYPPILKIMGRAITLEGREITKLRKDK
ECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEECCHHHHHHHHCC
MDLFINLHIEEFSFFDFNKFREIIRKGEEEAEKHLEEIYDLFYPGKKFLKKKR
EEEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
SFMARKIHPEILKFLSGISLFQKLSPAVLTRIYQNIEERNIYNHDVIYYRGDISDKLFI
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEE
VRHGEVMLTFGESGKSVKYLGEGEFFAENSLMTRTQHAGSAIAVMDTLLYVLDGHFFLEL
EECCCEEEEECCCCCEEEEECCCCEEECCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
AQKEPILSGNLIRLMSNRFREHLEPDNKITSLPRRMICHVPLEEVQGYKEKLDAIVEIGG
HHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
YSHVGKMTLVPMESFEKVSLQDAIRKLSLLRNKFPIIHLYFQQVGLKPEFDKLLLQADQI
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCHHHHHHHHCCE
VFWEDNPERNQKKKTEIISYFRSRIRNFAGRTIRYVDSVNSIRPEDSVKHQKIFHKEETF
EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SRYLVSRMRGLALGGGGARALAHVGLLKALEKENIKVDVVSGASFGAVIAALYARGENTE
HHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCHH
TIYKMIYKFFGGLDKPFDPTIPLVSFFKGKKMIRMLKQAFGSTLIEDLKIPFVTSAVDLH
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCC
SGEEYVMDRGPVWEALAAAMSLPGMFPPIFHGDHLLVDGGVINNVPESLIRQKGADIILS
CCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEE
VNVSPLRDEAIVRLLEDRKITGKSFFKNLWEDLKYPPILKIMGRAITLEGREITKLRKDK
ECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEECCHHHHHHHHCC
MDLFINLHIEEFSFFDFNKFREIIRKGEEEAEKHLEEIYDLFYPGKKFLKKKR
EEEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]