Click here to switch to the map view.

The map label for this gene is 45657608

Identifier: 45657608

GI number: 45657608

Start: 2127511

End: 2127888

Strand: Reverse

Name: 45657608

Synonym: LIC11742

Alternate gene names: NA

Gene position: 2127888-2127511 (Counterclockwise)

Preceding gene: 45657615

Following gene: 45657607

Centisome position: 49.75

GC content: 31.75

Gene sequence:

>378_bases
ATGAAAACTTTGAGATTTAAAACTATACTATTTATAGGAATCGTTTCTTTTTTATTTGGAAGTTGTATTTATAGAGATAT
TCGAGTTCCTGGGTTGAGTACGAATTACACTCAGTATATTTTGAACTCGGAGGATTTTCAAATTTTAGGAACCGTAGAAA
CAGAGGGAGTTTATACTTCTTGGTTATTACTCTGGGTAACTGGTGAGACAGGTTATAAAGAGTTACTAGATAAATCCAAA
GCTCTTGGAGGAGACGAAATTATCAATTATCGTTTTGAAATAGAAGAAACAAGTATTTTATTGGTCATTTGGAATCGAAT
CCGATGGAAAGCAACTGCACACGCAATCAAATATAGAGAAAAAATTAAAAAACCTTAA

Upstream 100 bases:

>100_bases
GATTATATCAAACTCGCTTTACAAGGTAAATTGTTGGAAGATCAATCTATTCGAGATTTATAATGTTTTTTTGTAGGATT
TATATAAAGGAGATAGGTTC

Downstream 100 bases:

>100_bases
CTTAAATATTATGGACTTTGAAAGTGTTTCTAAGTCTAAAAAAATAGAATGAATATAAATAAAGCTCAACTGATTTTAGA
AGCCGGCCTTTCTAGAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKTLRFKTILFIGIVSFLFGSCIYRDIRVPGLSTNYTQYILNSEDFQILGTVETEGVYTSWLLLWVTGETGYKELLDKSK
ALGGDEIINYRFEIEETSILLVIWNRIRWKATAHAIKYREKIKKP

Sequences:

>Translated_125_residues
MKTLRFKTILFIGIVSFLFGSCIYRDIRVPGLSTNYTQYILNSEDFQILGTVETEGVYTSWLLLWVTGETGYKELLDKSK
ALGGDEIINYRFEIEETSILLVIWNRIRWKATAHAIKYREKIKKP
>Mature_125_residues
MKTLRFKTILFIGIVSFLFGSCIYRDIRVPGLSTNYTQYILNSEDFQILGTVETEGVYTSWLLLWVTGETGYKELLDKSK
ALGGDEIINYRFEIEETSILLVIWNRIRWKATAHAIKYREKIKKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14589; Mature: 14589

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLRFKTILFIGIVSFLFGSCIYRDIRVPGLSTNYTQYILNSEDFQILGTVETEGVYTS
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCEEEEEEEECCCEEEE
WLLLWVTGETGYKELLDKSKALGGDEIINYRFEIEETSILLVIWNRIRWKATAHAIKYRE
EEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHH
KIKKP
HHCCC
>Mature Secondary Structure
MKTLRFKTILFIGIVSFLFGSCIYRDIRVPGLSTNYTQYILNSEDFQILGTVETEGVYTS
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCEEEEEEEECCCEEEE
WLLLWVTGETGYKELLDKSKALGGDEIINYRFEIEETSILLVIWNRIRWKATAHAIKYRE
EEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHH
KIKKP
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA