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The map label for this gene is tldD

Identifier: 45657607

GI number: 45657607

Start: 2126077

End: 2127462

Strand: Reverse

Name: tldD

Synonym: LIC11741

Alternate gene names: 45657607

Gene position: 2127462-2126077 (Counterclockwise)

Preceding gene: 45657608

Following gene: 45657606

Centisome position: 49.74

GC content: 39.39

Gene sequence:

>1386_bases
ATGAATATAAATAAAGCTCAACTGATTTTAGAAGCCGGCCTTTCTAGAAAGGCCGATTTTGTGGAAATTTTTGAAGAAGA
AACAAGATCTTCTTCCGTAAGTTTAAGAGATCGGAAAATAGAACAAAGTTTTGCCGGAATCGATTATGGAATTGGAATTA
GATTGATCTATGGAACGGATGTTTTATACGCACATACAAATAATGAAGATTTAGAACATTTGATTTCTCTAATAGATATT
TTAGCAGATTCCAGAAGTGCCACAAAAGAAAAAAGTCAAACTTTAGTTTTAAAAGGAGACTTAAAAATTCCTTCTTTTTC
TACGAATCTCATAGACCCTAGAAAAATTTCCCCAGATCAAAAGTTAGACATTTTATATAAAGCTGATAAAACGGCTAGAA
ACGTTTCTTCTAATATTGTACAAGTCGGCGTTTCTGCGTTTGACTCGGTTTCGCGAATTGGAATCTACAATTCGGAAGGT
TTATCTTTAGAAGATTTAAGAGTTCGAAGTCGTTTTAGTATCAACGTTACCGCCGAAAAGGAAGGAGAACGTTTTGTTGC
GTCCGAAAATCCGGGAGCCCAAAAAGGTTTTGAATTTTTCAGAGATCTTCCAGTAGAACAATTTTCTAAAACAGCGGCGG
AAAGATCTCTTTTAATGTTATCCGCAGGTTACATCGAAGGAAAAAAAATGCCTGTAGTGATGGGAAACGGCTTCGGAGGG
GTTATCTTTCACGAAGCATGTGGTCATCCCTTGGAAACGGAAGCAATTCGTAAAAAGTCTTCTCCCTTTGTAGATAAACT
CGGAAAAAGAATCGCACAGTCCTGTTTAACCGCAATCGATGACGGCACCATTCCAGATTCTTGGGGAAGTATCAACGTAG
ACGACGAAGGTACTGCTCCTCAAAAAACCATTTTAATTGAAAATGGAATCCTAAAAAATTATCTCTCCGATCGAGTAGGC
GCTCAAGAAGTAGGAGTTGAAAAAACAGGAAGTGCAAGAAGAGAAAGTTATATGTATGCTCCCGTTTCCAGAATGAGAAA
CACTTATATCGCTGCAGGTAAAGACTCTTTCGATTCTATGTTATCTGGGATTGATTACGGACTTTTCGCCAAAAAAATGG
GAGGAGGTTCAGTCAATCCGTCTACGGGAGAATTTAATTTTTCTGTGGAAGAGGGATACGTTATCCGAAACGGAAAGATA
GCGGAGCCGGTCCGTGGAGCCACTCTGATTGGAAAAGGAGACGAAATTCTTCCAAAGATTAGTATGGTAGGAAAAGATTT
AGAACTAGCAGCTGGAATGTGTGGTGCGGCTTCCGGTTCTGTTCCGGTTACGGTGGGGCAACCTTCTTTAAAAGTGGACG
AGATTCTGGTAGGAGGTCGTTCATGA

Upstream 100 bases:

>100_bases
GAAAGCAACTGCACACGCAATCAAATATAGAGAAAAAATTAAAAAACCTTAACTTAAATATTATGGACTTTGAAAGTGTT
TCTAAGTCTAAAAAAATAGA

Downstream 100 bases:

>100_bases
ATCTGGAACATTCCGTAGAATACGTGTTAGACGTTTGTAAAAAGAAAGGTTTAGACGGTTTTGATTTAGTTGCTTCCGAG
TCTAAAGATGTAGGAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MNINKAQLILEAGLSRKADFVEIFEEETRSSSVSLRDRKIEQSFAGIDYGIGIRLIYGTDVLYAHTNNEDLEHLISLIDI
LADSRSATKEKSQTLVLKGDLKIPSFSTNLIDPRKISPDQKLDILYKADKTARNVSSNIVQVGVSAFDSVSRIGIYNSEG
LSLEDLRVRSRFSINVTAEKEGERFVASENPGAQKGFEFFRDLPVEQFSKTAAERSLLMLSAGYIEGKKMPVVMGNGFGG
VIFHEACGHPLETEAIRKKSSPFVDKLGKRIAQSCLTAIDDGTIPDSWGSINVDDEGTAPQKTILIENGILKNYLSDRVG
AQEVGVEKTGSARRESYMYAPVSRMRNTYIAAGKDSFDSMLSGIDYGLFAKKMGGGSVNPSTGEFNFSVEEGYVIRNGKI
AEPVRGATLIGKGDEILPKISMVGKDLELAAGMCGAASGSVPVTVGQPSLKVDEILVGGRS

Sequences:

>Translated_461_residues
MNINKAQLILEAGLSRKADFVEIFEEETRSSSVSLRDRKIEQSFAGIDYGIGIRLIYGTDVLYAHTNNEDLEHLISLIDI
LADSRSATKEKSQTLVLKGDLKIPSFSTNLIDPRKISPDQKLDILYKADKTARNVSSNIVQVGVSAFDSVSRIGIYNSEG
LSLEDLRVRSRFSINVTAEKEGERFVASENPGAQKGFEFFRDLPVEQFSKTAAERSLLMLSAGYIEGKKMPVVMGNGFGG
VIFHEACGHPLETEAIRKKSSPFVDKLGKRIAQSCLTAIDDGTIPDSWGSINVDDEGTAPQKTILIENGILKNYLSDRVG
AQEVGVEKTGSARRESYMYAPVSRMRNTYIAAGKDSFDSMLSGIDYGLFAKKMGGGSVNPSTGEFNFSVEEGYVIRNGKI
AEPVRGATLIGKGDEILPKISMVGKDLELAAGMCGAASGSVPVTVGQPSLKVDEILVGGRS
>Mature_461_residues
MNINKAQLILEAGLSRKADFVEIFEEETRSSSVSLRDRKIEQSFAGIDYGIGIRLIYGTDVLYAHTNNEDLEHLISLIDI
LADSRSATKEKSQTLVLKGDLKIPSFSTNLIDPRKISPDQKLDILYKADKTARNVSSNIVQVGVSAFDSVSRIGIYNSEG
LSLEDLRVRSRFSINVTAEKEGERFVASENPGAQKGFEFFRDLPVEQFSKTAAERSLLMLSAGYIEGKKMPVVMGNGFGG
VIFHEACGHPLETEAIRKKSSPFVDKLGKRIAQSCLTAIDDGTIPDSWGSINVDDEGTAPQKTILIENGILKNYLSDRVG
AQEVGVEKTGSARRESYMYAPVSRMRNTYIAAGKDSFDSMLSGIDYGLFAKKMGGGSVNPSTGEFNFSVEEGYVIRNGKI
AEPVRGATLIGKGDEILPKISMVGKDLELAAGMCGAASGSVPVTVGQPSLKVDEILVGGRS

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=462, Percent_Identity=37.4458874458874, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1790682, Length=426, Percent_Identity=24.4131455399061, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 49932; Mature: 49932

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINKAQLILEAGLSRKADFVEIFEEETRSSSVSLRDRKIEQSFAGIDYGIGIRLIYGTD
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECE
VLYAHTNNEDLEHLISLIDILADSRSATKEKSQTLVLKGDLKIPSFSTNLIDPRKISPDQ
EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
KLDILYKADKTARNVSSNIVQVGVSAFDSVSRIGIYNSEGLSLEDLRVRSRFSINVTAEK
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHEEECCEEEEEEEECC
EGERFVASENPGAQKGFEFFRDLPVEQFSKTAAERSLLMLSAGYIEGKKMPVVMGNGFGG
CCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCC
VIFHEACGHPLETEAIRKKSSPFVDKLGKRIAQSCLTAIDDGTIPDSWGSINVDDEGTAP
EEEHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC
QKTILIENGILKNYLSDRVGAQEVGVEKTGSARRESYMYAPVSRMRNTYIAAGKDSFDSM
CEEEEEECCHHHHHHHHCCCHHHCCCCCCCCHHHHCEEECCHHHHCCCEEECCCCHHHHH
LSGIDYGLFAKKMGGGSVNPSTGEFNFSVEEGYVIRNGKIAEPVRGATLIGKGDEILPKI
HHCCCHHHHHHHCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEECCCCHHHHHH
SMVGKDLELAAGMCGAASGSVPVTVGQPSLKVDEILVGGRS
HHCCCCHHHHCCCCCCCCCCEEEEECCCCCEEEHEEECCCC
>Mature Secondary Structure
MNINKAQLILEAGLSRKADFVEIFEEETRSSSVSLRDRKIEQSFAGIDYGIGIRLIYGTD
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECE
VLYAHTNNEDLEHLISLIDILADSRSATKEKSQTLVLKGDLKIPSFSTNLIDPRKISPDQ
EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
KLDILYKADKTARNVSSNIVQVGVSAFDSVSRIGIYNSEGLSLEDLRVRSRFSINVTAEK
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHEEECCEEEEEEEECC
EGERFVASENPGAQKGFEFFRDLPVEQFSKTAAERSLLMLSAGYIEGKKMPVVMGNGFGG
CCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCC
VIFHEACGHPLETEAIRKKSSPFVDKLGKRIAQSCLTAIDDGTIPDSWGSINVDDEGTAP
EEEHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC
QKTILIENGILKNYLSDRVGAQEVGVEKTGSARRESYMYAPVSRMRNTYIAAGKDSFDSM
CEEEEEECCHHHHHHHHCCCHHHCCCCCCCCHHHHCEEECCHHHHCCCEEECCCCHHHHH
LSGIDYGLFAKKMGGGSVNPSTGEFNFSVEEGYVIRNGKIAEPVRGATLIGKGDEILPKI
HHCCCHHHHHHHCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEECCCCHHHHHH
SMVGKDLELAAGMCGAASGSVPVTVGQPSLKVDEILVGGRS
HHCCCCHHHHCCCCCCCCCCEEEEECCCCCEEEHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]