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The map label for this gene is 45657319

Identifier: 45657319

GI number: 45657319

Start: 1779533

End: 1779919

Strand: Reverse

Name: 45657319

Synonym: LIC11443

Alternate gene names: NA

Gene position: 1779919-1779533 (Counterclockwise)

Preceding gene: 45657321

Following gene: 45657318

Centisome position: 41.61

GC content: 34.11

Gene sequence:

>387_bases
ATGAAAGCAAAAGTAAAACGTTGCGCAGCTTTTTTAGGTATGGTCGGTTTGACCGCTGCTCTAATTTGTTTTACGGTAAT
GCTTTCCGGAAACTCCTGTCCCACATTTTATAAGTCTACACAGACAGTTGAAAAAAACTGTCATTCATCCGAAAAAATGG
ATGATCAAACTTCTTCTACTTGTTCCTCTTGCAATTTACTTTTTTCTGCTGAACATTCTAAAACTCCAGAATTATACAGA
AGTTATTTCTCTGTTCTTACAATTTTTCAGAACTATTTTCATTTTGCATCTTTGATTTTTCATTTTCCAAAAACGTGGAA
AGATCCAAATTCAAACGCACAAAAGTTTGTCGTTCAATCCATTTCTTCCATCAGACTATTGATCTGA

Upstream 100 bases:

>100_bases
TAGAAAGGAATACAAATGTCCCTTTAATAATCCATGAAATCAAACGATTTTTTAAAAACTTCTTGCCTGATCCTTTGATT
TCCTAAGTCTAAGAAACAAG

Downstream 100 bases:

>100_bases
TCCCCCTCTTCTTTTAAAATCATTTTACAACTTTAAAATTAAGGAATATTATATGTTAACTAGAAAAGAATTACTCACAC
AATCCGCAGCTCTACTTGCA

Product: outer membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKAKVKRCAAFLGMVGLTAALICFTVMLSGNSCPTFYKSTQTVEKNCHSSEKMDDQTSSTCSSCNLLFSAEHSKTPELYR
SYFSVLTIFQNYFHFASLIFHFPKTWKDPNSNAQKFVVQSISSIRLLI

Sequences:

>Translated_128_residues
MKAKVKRCAAFLGMVGLTAALICFTVMLSGNSCPTFYKSTQTVEKNCHSSEKMDDQTSSTCSSCNLLFSAEHSKTPELYR
SYFSVLTIFQNYFHFASLIFHFPKTWKDPNSNAQKFVVQSISSIRLLI
>Mature_128_residues
MKAKVKRCAAFLGMVGLTAALICFTVMLSGNSCPTFYKSTQTVEKNCHSSEKMDDQTSSTCSSCNLLFSAEHSKTPELYR
SYFSVLTIFQNYFHFASLIFHFPKTWKDPNSNAQKFVVQSISSIRLLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14430; Mature: 14430

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKVKRCAAFLGMVGLTAALICFTVMLSGNSCPTFYKSTQTVEKNCHSSEKMDDQTSST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHH
CSSCNLLFSAEHSKTPELYRSYFSVLTIFQNYFHFASLIFHFPKTWKDPNSNAQKFVVQS
HHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ISSIRLLI
HHHHHHCC
>Mature Secondary Structure
MKAKVKRCAAFLGMVGLTAALICFTVMLSGNSCPTFYKSTQTVEKNCHSSEKMDDQTSST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHH
CSSCNLLFSAEHSKTPELYRSYFSVLTIFQNYFHFASLIFHFPKTWKDPNSNAQKFVVQS
HHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ISSIRLLI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA