| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is ttuD [H]
Identifier: 45657321
GI number: 45657321
Start: 1781344
End: 1782687
Strand: Reverse
Name: ttuD [H]
Synonym: LIC11445
Alternate gene names: 45657321
Gene position: 1782687-1781344 (Counterclockwise)
Preceding gene: 45657324
Following gene: 45657319
Centisome position: 41.68
GC content: 36.61
Gene sequence:
>1344_bases ATGCCACGTCTCTCTTTTTTAAACAACGAAAAAGTAGACCTTCATTCTACTCAATCCATCTTATTTCATTTAGGTGGAGT TGCAATTCGAAACTCTTTGCCCGGACCTTCCGTTCGTAAGTTTTTATTAGAACAAAAACCAAAGGGAAGAATTCTACTAC TTTCTATCGGAAAAGCAGCAGAAGAAATGGCTAACGCCGCTTATGAAATCCTACAATCTCAGATTTTCGGAGGAATTATT CTCACAAAATACGGATATACTTCGGGAAAAAAATTTCCACCTTTAGAAATTTTAGAAGCGGGACATCCAATCCCAGATAC AAACAGCATATTAGGTGGAAAAAAAATCCTAGAACTCTGTTCCAATTTACGAGAAGACGACATTGTTTTAATACTTCTTT CTGGAGGAGGTTCCGCTTTAATGGAAGTACCTGAATCCGGTCTAAATTTGGAAGATCTGATCGTTTGGAATTCTAAACTT ATTTCCTGTGGAGCAGACATTCAAGAAATCAATTCGGTAAGAACTCTTTTATCCTCTATCAAAGGTGGTGGATTACTTAC AAAAATTCTTCCTTCAAAATCGATCACCTTAATCCTATCGGACGTAATTGGAGACGACCTTTCCAAAGTAGCGTCCGGAC CAACGATTCCTTCTAAAATCGAAAAAAATTCTATTTTAAGAATATTCAAACAATATAATCTACCTTTAGATCCTAAAATC GAAACTATACTACACAAAAAAACAGAACAATCCATAAAAATCTCAAATCAGAAAATCAAATCTAAAAACTTTTCAGCAGA ATATAAAATCGATCCTAATAAAAATTCCGTCCATTGTATCGGAAACATAACCCAAGCACTTGACGCAGTTCAGAAAGAAT GCATAAATTTGAATATTCCAGTTCTATTGCTTACTTCTTCTTTAAATTGCGAAGCAAAAGAAGCTGGCTTCTTTTTAGGA GAAATTGCAAAAGAAAATCTGAAAAATAAAAACTCTCCGCTTTTAATTCTCTGTGGAGGAGAAACCACGGTAACTCACGA CGGCTCCGGAAAAGGAGGAAGAAACCAAGAATTAGCACTTGCTTTCTCAAAACGAATTTCTGGTTGTCAAGGAATCACTT TATTCTCACTCGCAACAGACGGAAGCGACGGACCTACGGACGCAGCAGGGGCAATCGTAGATGGAACCACTTGGAAAAAA ATTTACAGAAACAAAGACGCAAACTTGGCTCTAAAAACGCATAACTCTTACGAAGTGTTAGCTCAGGTCAATTCCTTGGT TTTTACGGATGCGACAGGAACCAACGTAAACGACATTCAATTTTTATTGATTACTACATTTTAA
Upstream 100 bases:
>100_bases AATAACTTTCTAAAATCCACGAAACAAGACGTCCAACTTTCATGACGATTTTAACTAAAAACGTTTCTTTTTTAAAAGGA TCTTTTGTTTTTGGAATCCA
Downstream 100 bases:
>100_bases AAATTTTTTCCTACTCAATCGCAGATCTTTCAATTTATTTGGTTTTTGACTCGAGTTTTTTCAATGACAAAAATTTTCTT TTAAAAACGTTAGTTTAGTA
Product: hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MPRLSFLNNEKVDLHSTQSILFHLGGVAIRNSLPGPSVRKFLLEQKPKGRILLLSIGKAAEEMANAAYEILQSQIFGGII LTKYGYTSGKKFPPLEILEAGHPIPDTNSILGGKKILELCSNLREDDIVLILLSGGGSALMEVPESGLNLEDLIVWNSKL ISCGADIQEINSVRTLLSSIKGGGLLTKILPSKSITLILSDVIGDDLSKVASGPTIPSKIEKNSILRIFKQYNLPLDPKI ETILHKKTEQSIKISNQKIKSKNFSAEYKIDPNKNSVHCIGNITQALDAVQKECINLNIPVLLLTSSLNCEAKEAGFFLG EIAKENLKNKNSPLLILCGGETTVTHDGSGKGGRNQELALAFSKRISGCQGITLFSLATDGSDGPTDAAGAIVDGTTWKK IYRNKDANLALKTHNSYEVLAQVNSLVFTDATGTNVNDIQFLLITTF
Sequences:
>Translated_447_residues MPRLSFLNNEKVDLHSTQSILFHLGGVAIRNSLPGPSVRKFLLEQKPKGRILLLSIGKAAEEMANAAYEILQSQIFGGII LTKYGYTSGKKFPPLEILEAGHPIPDTNSILGGKKILELCSNLREDDIVLILLSGGGSALMEVPESGLNLEDLIVWNSKL ISCGADIQEINSVRTLLSSIKGGGLLTKILPSKSITLILSDVIGDDLSKVASGPTIPSKIEKNSILRIFKQYNLPLDPKI ETILHKKTEQSIKISNQKIKSKNFSAEYKIDPNKNSVHCIGNITQALDAVQKECINLNIPVLLLTSSLNCEAKEAGFFLG EIAKENLKNKNSPLLILCGGETTVTHDGSGKGGRNQELALAFSKRISGCQGITLFSLATDGSDGPTDAAGAIVDGTTWKK IYRNKDANLALKTHNSYEVLAQVNSLVFTDATGTNVNDIQFLLITTF >Mature_446_residues PRLSFLNNEKVDLHSTQSILFHLGGVAIRNSLPGPSVRKFLLEQKPKGRILLLSIGKAAEEMANAAYEILQSQIFGGIIL TKYGYTSGKKFPPLEILEAGHPIPDTNSILGGKKILELCSNLREDDIVLILLSGGGSALMEVPESGLNLEDLIVWNSKLI SCGADIQEINSVRTLLSSIKGGGLLTKILPSKSITLILSDVIGDDLSKVASGPTIPSKIEKNSILRIFKQYNLPLDPKIE TILHKKTEQSIKISNQKIKSKNFSAEYKIDPNKNSVHCIGNITQALDAVQKECINLNIPVLLLTSSLNCEAKEAGFFLGE IAKENLKNKNSPLLILCGGETTVTHDGSGKGGRNQELALAFSKRISGCQGITLFSLATDGSDGPTDAAGAIVDGTTWKKI YRNKDANLALKTHNSYEVLAQVNSLVFTDATGTNVNDIQFLLITTF
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=506, Percent_Identity=27.8656126482213, Blast_Score=163, Evalue=3e-40, Organism=Caenorhabditis elegans, GI193205461, Length=434, Percent_Identity=32.9493087557604, Blast_Score=153, Evalue=1e-37, Organism=Drosophila melanogaster, GI19920578, Length=432, Percent_Identity=32.4074074074074, Blast_Score=160, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 48276; Mature: 48145
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLSFLNNEKVDLHSTQSILFHLGGVAIRNSLPGPSVRKFLLEQKPKGRILLLSIGKAA CCCCCCCCCCCEECHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCCCEEEEECCHHH EEMANAAYEILQSQIFGGIILTKYGYTSGKKFPPLEILEAGHPIPDTNSILGGKKILELC HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHH SNLREDDIVLILLSGGGSALMEVPESGLNLEDLIVWNSKLISCGADIQEINSVRTLLSSI HCCCCCCEEEEEECCCCHHHHHCCCCCCCHHHEEEECCEEEECCCCHHHHHHHHHHHHHC KGGGLLTKILPSKSITLILSDVIGDDLSKVASGPTIPSKIEKNSILRIFKQYNLPLDPKI CCCCEEEECCCCCCEEEEEHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCH ETILHKKTEQSIKISNQKIKSKNFSAEYKIDPNKNSVHCIGNITQALDAVQKECINLNIP HHHHHHHHHHHEEECCHHHCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCC VLLLTSSLNCEAKEAGFFLGEIAKENLKNKNSPLLILCGGETTVTHDGSGKGGRNQELAL EEEEECCCCCCHHHHCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCCHHHH AFSKRISGCQGITLFSLATDGSDGPTDAAGAIVDGTTWKKIYRNKDANLALKTHNSYEVL HHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEECCCHHHHHHCCCCCCEEEEECCCHHHH AQVNSLVFTDATGTNVNDIQFLLITTF HHHHHEEEECCCCCCCCCEEEEEEEEC >Mature Secondary Structure PRLSFLNNEKVDLHSTQSILFHLGGVAIRNSLPGPSVRKFLLEQKPKGRILLLSIGKAA CCCCCCCCCCEECHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCCCEEEEECCHHH EEMANAAYEILQSQIFGGIILTKYGYTSGKKFPPLEILEAGHPIPDTNSILGGKKILELC HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHH SNLREDDIVLILLSGGGSALMEVPESGLNLEDLIVWNSKLISCGADIQEINSVRTLLSSI HCCCCCCEEEEEECCCCHHHHHCCCCCCCHHHEEEECCEEEECCCCHHHHHHHHHHHHHC KGGGLLTKILPSKSITLILSDVIGDDLSKVASGPTIPSKIEKNSILRIFKQYNLPLDPKI CCCCEEEECCCCCCEEEEEHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCH ETILHKKTEQSIKISNQKIKSKNFSAEYKIDPNKNSVHCIGNITQALDAVQKECINLNIP HHHHHHHHHHHEEECCHHHCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCC VLLLTSSLNCEAKEAGFFLGEIAKENLKNKNSPLLILCGGETTVTHDGSGKGGRNQELAL EEEEECCCCCCHHHHCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCCHHHH AFSKRISGCQGITLFSLATDGSDGPTDAAGAIVDGTTWKKIYRNKDANLALKTHNSYEVL HHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEECCCHHHHHHCCCCCCEEEEECCCHHHH AQVNSLVFTDATGTNVNDIQFLLITTF HHHHHEEEECCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]