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The map label for this gene is 45657276

Identifier: 45657276

GI number: 45657276

Start: 1718592

End: 1719734

Strand: Reverse

Name: 45657276

Synonym: LIC11399

Alternate gene names: NA

Gene position: 1719734-1718592 (Counterclockwise)

Preceding gene: 45657277

Following gene: 45657274

Centisome position: 40.21

GC content: 36.4

Gene sequence:

>1143_bases
ATGTTTGATCGATTGTATTTTTGTAAATTAGAATATTTAATTTTACTAATATTATTTATTATATCTTTCGCTTCTACTTC
TGCCGTAAGTGCGCCAATCGCCTACGGAAATTTAGGTTCGGAAGTGGATTTTATCGATTTTGGTAGATGGACCACAACAC
CTTTTAGTTATTCCGTATCATCCTCCTTTTCCGCTGAATACGGAGGATTTAATCTTTTTGATTCGGATCCAAATACACAT
TGGTATTCTGTCAATCGTTCCGACTCTGAATGGGTCATTGTAGACTTCGGTTCTAAAAGACTGATCAACGGTTTAGAAAT
TACAGTCCCTATTTTTAAAAAAGAAAGAGCCGTAAAAAAATACGAAATCCAAGTTTTAATCCGGGACGACTGGAGAACCA
TTCTTACAAATCAAAACGTGGAACTGCATAATTTTCATAAACTCGGAAATATAGATGCGTCCGTTTTGAGAATTTATTTT
CCCGATTCCACAAATCGTGAAGTTGTAATTAGTGACCTTAAACTTTTTCTGAATCAAAAACTTTTAAACGGAATTGAACC
TAGACTTAGAGGTTATTCGTTTCCAGTTCCTGACGGACTCATTTCCAGTTTTGATTCCCAACTTCCAAATGCTCCTAGAA
CCTATCGAAACGGAGTCCATAAGGGAATTGATATATACAAAAAAAAAGAACTAGATGGCCAGATTCGAAACTTAAATTTC
CAAGACGAAATAATCTCACCCGCAGACGGAATTGTGATTCGAGCAGATCATTCCTATTCTCCCATGACTCTGTCAGATTA
TGAATATCACACTACCCAATCCCAAAAAGGAACCGTGACTTATGTTGAAAAAGATTTTGGAGGAAGACAAGTTTGGATCG
ATCACGGTCACGGTGTAATGACTAGCTTCAACCATCTTTCTTCGATTCATAAAAACATAAAAGTAGGTGAAAAAGTTAAA
CAAGGAGAATCAATCGGAACCGTTGGAAACTCAGGTTTATTAGAAGAAGCGAAAAATATCTCAGACAATATTCATCTTCA
TTTTGAAATCTGGGTAGACGGTGAATTTTTAGGAAACGGTCTCCCTCCCGCTCAAGTTCGCAAATTACTTCAATTCTTTT
TCAAAAGAAACGGAGTGGATTGA

Upstream 100 bases:

>100_bases
GCACTTCGTCCGGATCTAACTCAAAAAGATAAAAAATATTTGGATTCTTGGGAAACGGAAAAAACCAATCTCTTAAGTCC
AAAGCCAGGTAAACCCTTTC

Downstream 100 bases:

>100_bases
TTTCCACACAACTAACGTATGTTTAAGATTAAAAAAGTCTTTTAACGTTTTCCACAAATCCATACTATCGTAAATAATAA
TTTTCTTATTTATGATCTTT

Product: membrane metalloendopeptidase

Products: NA

Alternate protein names: Metallopeptidase; M23 Family Metalloendopeptidase

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MFDRLYFCKLEYLILLILFIISFASTSAVSAPIAYGNLGSEVDFIDFGRWTTTPFSYSVSSSFSAEYGGFNLFDSDPNTH
WYSVNRSDSEWVIVDFGSKRLINGLEITVPIFKKERAVKKYEIQVLIRDDWRTILTNQNVELHNFHKLGNIDASVLRIYF
PDSTNREVVISDLKLFLNQKLLNGIEPRLRGYSFPVPDGLISSFDSQLPNAPRTYRNGVHKGIDIYKKKELDGQIRNLNF
QDEIISPADGIVIRADHSYSPMTLSDYEYHTTQSQKGTVTYVEKDFGGRQVWIDHGHGVMTSFNHLSSIHKNIKVGEKVK
QGESIGTVGNSGLLEEAKNISDNIHLHFEIWVDGEFLGNGLPPAQVRKLLQFFFKRNGVD

Sequences:

>Translated_380_residues
MFDRLYFCKLEYLILLILFIISFASTSAVSAPIAYGNLGSEVDFIDFGRWTTTPFSYSVSSSFSAEYGGFNLFDSDPNTH
WYSVNRSDSEWVIVDFGSKRLINGLEITVPIFKKERAVKKYEIQVLIRDDWRTILTNQNVELHNFHKLGNIDASVLRIYF
PDSTNREVVISDLKLFLNQKLLNGIEPRLRGYSFPVPDGLISSFDSQLPNAPRTYRNGVHKGIDIYKKKELDGQIRNLNF
QDEIISPADGIVIRADHSYSPMTLSDYEYHTTQSQKGTVTYVEKDFGGRQVWIDHGHGVMTSFNHLSSIHKNIKVGEKVK
QGESIGTVGNSGLLEEAKNISDNIHLHFEIWVDGEFLGNGLPPAQVRKLLQFFFKRNGVD
>Mature_380_residues
MFDRLYFCKLEYLILLILFIISFASTSAVSAPIAYGNLGSEVDFIDFGRWTTTPFSYSVSSSFSAEYGGFNLFDSDPNTH
WYSVNRSDSEWVIVDFGSKRLINGLEITVPIFKKERAVKKYEIQVLIRDDWRTILTNQNVELHNFHKLGNIDASVLRIYF
PDSTNREVVISDLKLFLNQKLLNGIEPRLRGYSFPVPDGLISSFDSQLPNAPRTYRNGVHKGIDIYKKKELDGQIRNLNF
QDEIISPADGIVIRADHSYSPMTLSDYEYHTTQSQKGTVTYVEKDFGGRQVWIDHGHGVMTSFNHLSSIHKNIKVGEKVK
QGESIGTVGNSGLLEEAKNISDNIHLHFEIWVDGEFLGNGLPPAQVRKLLQFFFKRNGVD

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43250; Mature: 43250

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRLYFCKLEYLILLILFIISFASTSAVSAPIAYGNLGSEVDFIDFGRWTTTPFSYSVS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEECCCEECCCEEEECC
SSFSAEYGGFNLFDSDPNTHWYSVNRSDSEWVIVDFGSKRLINGLEITVPIFKKERAVKK
CCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECCCCHHCCCEEEEEEEHHCCCCCEE
YEIQVLIRDDWRTILTNQNVELHNFHKLGNIDASVLRIYFPDSTNREVVISDLKLFLNQK
EEEEEEEECCCEEECCCCCCEEECHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHH
LLNGIEPRLRGYSFPVPDGLISSFDSQLPNAPRTYRNGVHKGIDIYKKKELDGQIRNLNF
HHHCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCEECCCC
QDEIISPADGIVIRADHSYSPMTLSDYEYHTTQSQKGTVTYVEKDFGGRQVWIDHGHGVM
HHHHCCCCCCEEEEECCCCCCCEECCCEEECCCCCCCEEEEEEECCCCEEEEEECCCCHH
TSFNHLSSIHKNIKVGEKVKQGESIGTVGNSGLLEEAKNISDNIHLHFEIWVDGEFLGNG
HHHHHHHHHHHHCHHCHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCC
LPPAQVRKLLQFFFKRNGVD
CCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFDRLYFCKLEYLILLILFIISFASTSAVSAPIAYGNLGSEVDFIDFGRWTTTPFSYSVS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEECCCEECCCEEEECC
SSFSAEYGGFNLFDSDPNTHWYSVNRSDSEWVIVDFGSKRLINGLEITVPIFKKERAVKK
CCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEECCCCHHCCCEEEEEEEHHCCCCCEE
YEIQVLIRDDWRTILTNQNVELHNFHKLGNIDASVLRIYFPDSTNREVVISDLKLFLNQK
EEEEEEEECCCEEECCCCCCEEECHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHH
LLNGIEPRLRGYSFPVPDGLISSFDSQLPNAPRTYRNGVHKGIDIYKKKELDGQIRNLNF
HHHCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCEECCCC
QDEIISPADGIVIRADHSYSPMTLSDYEYHTTQSQKGTVTYVEKDFGGRQVWIDHGHGVM
HHHHCCCCCCEEEEECCCCCCCEECCCEEECCCCCCCEEEEEEECCCCEEEEEECCCCHH
TSFNHLSSIHKNIKVGEKVKQGESIGTVGNSGLLEEAKNISDNIHLHFEIWVDGEFLGNG
HHHHHHHHHHHHCHHCHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCC
LPPAQVRKLLQFFFKRNGVD
CCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA