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The map label for this gene is 45657210

Identifier: 45657210

GI number: 45657210

Start: 1643876

End: 1645144

Strand: Reverse

Name: 45657210

Synonym: LIC11332

Alternate gene names: NA

Gene position: 1645144-1643876 (Counterclockwise)

Preceding gene: 45657212

Following gene: 45657209

Centisome position: 38.46

GC content: 36.25

Gene sequence:

>1269_bases
TTGACTTTCTTGCATATCAACAAAAATCTACGGAAGATGAAAGATTACTTCCTTTCGATCGGCGCAGGACCCAATCAAGT
TCCTTTAATTTCGGCAGCGAATAAACTGGGTTACTTAGTGATTGCGGTGGATCAAAACGATCGTGCACCCGGACTCAATA
TCTCCTCGCTAAGAATCATGGAATCCGTTACCGAATATCGTAAAATTCTAAAAACTGTTTCCGAAATTCCTCTTCAAGGT
AATATACTCGGAATAGGCACTCGTTCTTTCGGAAAGGCAACTTACACTGCTTCTTACATCGCGAACAAATTAAAATTACG
TTATGCGAGTCTTGAATGTGTAGAAATTTGTTCTAATAAAAATAAACTCAAAGAAGTTGCAAGCAGAGTTGGGATTTTAA
CACCTCAAAATTACGATACAAACTCTAAACATCTATTTCCTTTTGTATATAAACCTTCCCGTGGAAACGGTAAGGAAGGA
ATTCGAACCTTTCACGACTTAGAAGAATGGGAAAACTTTCTTCAATCCAAAAAAAAGAGCCAAAAATCGCCCAAAAAGAA
AACAAAAGCGCATAACGTGGTTCCAGAAGAATGGATCTCCGAAGAATTTATCCCTGGTTTTGAAATTACTGTTTGTGGAC
TCATTCAAAACGGAGAATTTTTTCCTGCATCCATTTCCCACAAGGATGTAACTCATTATGCACCTTATTTAGAAATTGCT
CATACTCTTCCATTTTTACATTCAGAATTAATTGGAGAAATTTTACTCAATTGTAGGGCTTTAATCGCAGCCACTAAAAT
GAATAATTGTCCTTTTGTTGCAGAATTCAGAATCAACCCACAAGGAGAAATTTATCTGATTGAAGCCGTTCCGGAAGTAG
GAGGAGAATTTTTAGCGGATAATTTGATTCCGAATTATTTTGGTTCTTCTTATTTTGAGAATTTAGTAAAACTTCTTGTA
GGAGAAAAAATTAAACCTTTCCCGAATTATTTTAAAATTTCTAATCGATACGCTGGAATTTTTTTCTCAGCTCCTCCCGA
AGGAAAATCTAAACTCGTAGAACATTCCGAATTCCACACAAACGGAAAGGAAAAATTGATCTTCGATAGTAAATTAAAAC
AACCGGGAGATGTTTTAAAAACAAACGAAGGAAACGGAGTTCGTACTAGAAGTATAGGAATCCTAAGTCCACAAGAAAAT
CATCAAACCTTGGCTCAATGGAAGGAGTCCGTTTTGCAAAGATTGGAAGGTAAATTTGAATCCGTCTGA

Upstream 100 bases:

>100_bases
TTTCTGACCTATTTTAGAATCGAGCGTTTTTTACTTTTATCAATAAACTCTGCAAAGTAGACAGCTTAAAAGGAAGAACT
TTTTAAACCTTAAAAATCTT

Downstream 100 bases:

>100_bases
ATTTTCTTCTCGCTCCGCCTGGAATTTTCATTACACCAGAACCAAATCCAGACTCAGTTATCCCGATGAAAATCTGGTCA
GAATGCTTTCCAAAATCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphoribosylglycinamide Synthetase; Carbamoyl-Phosphate Synthase Large Subunit; L-Lactate Dehydrogenase; Carbamoyl-Phosphate-Synthetase; Glycolate Oxidase; CarB Family Protein; Biotin Carboxylase

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MTFLHINKNLRKMKDYFLSIGAGPNQVPLISAANKLGYLVIAVDQNDRAPGLNISSLRIMESVTEYRKILKTVSEIPLQG
NILGIGTRSFGKATYTASYIANKLKLRYASLECVEICSNKNKLKEVASRVGILTPQNYDTNSKHLFPFVYKPSRGNGKEG
IRTFHDLEEWENFLQSKKKSQKSPKKKTKAHNVVPEEWISEEFIPGFEITVCGLIQNGEFFPASISHKDVTHYAPYLEIA
HTLPFLHSELIGEILLNCRALIAATKMNNCPFVAEFRINPQGEIYLIEAVPEVGGEFLADNLIPNYFGSSYFENLVKLLV
GEKIKPFPNYFKISNRYAGIFFSAPPEGKSKLVEHSEFHTNGKEKLIFDSKLKQPGDVLKTNEGNGVRTRSIGILSPQEN
HQTLAQWKESVLQRLEGKFESV

Sequences:

>Translated_422_residues
MTFLHINKNLRKMKDYFLSIGAGPNQVPLISAANKLGYLVIAVDQNDRAPGLNISSLRIMESVTEYRKILKTVSEIPLQG
NILGIGTRSFGKATYTASYIANKLKLRYASLECVEICSNKNKLKEVASRVGILTPQNYDTNSKHLFPFVYKPSRGNGKEG
IRTFHDLEEWENFLQSKKKSQKSPKKKTKAHNVVPEEWISEEFIPGFEITVCGLIQNGEFFPASISHKDVTHYAPYLEIA
HTLPFLHSELIGEILLNCRALIAATKMNNCPFVAEFRINPQGEIYLIEAVPEVGGEFLADNLIPNYFGSSYFENLVKLLV
GEKIKPFPNYFKISNRYAGIFFSAPPEGKSKLVEHSEFHTNGKEKLIFDSKLKQPGDVLKTNEGNGVRTRSIGILSPQEN
HQTLAQWKESVLQRLEGKFESV
>Mature_421_residues
TFLHINKNLRKMKDYFLSIGAGPNQVPLISAANKLGYLVIAVDQNDRAPGLNISSLRIMESVTEYRKILKTVSEIPLQGN
ILGIGTRSFGKATYTASYIANKLKLRYASLECVEICSNKNKLKEVASRVGILTPQNYDTNSKHLFPFVYKPSRGNGKEGI
RTFHDLEEWENFLQSKKKSQKSPKKKTKAHNVVPEEWISEEFIPGFEITVCGLIQNGEFFPASISHKDVTHYAPYLEIAH
TLPFLHSELIGEILLNCRALIAATKMNNCPFVAEFRINPQGEIYLIEAVPEVGGEFLADNLIPNYFGSSYFENLVKLLVG
EKIKPFPNYFKISNRYAGIFFSAPPEGKSKLVEHSEFHTNGKEKLIFDSKLKQPGDVLKTNEGNGVRTRSIGILSPQENH
QTLAQWKESVLQRLEGKFESV

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47545; Mature: 47414

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLHINKNLRKMKDYFLSIGAGPNQVPLISAANKLGYLVIAVDQNDRAPGLNISSLRIM
CEEEEECHHHHHHHHHHEECCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHH
ESVTEYRKILKTVSEIPLQGNILGIGTRSFGKATYTASYIANKLKLRYASLECVEICSNK
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
NKLKEVASRVGILTPQNYDTNSKHLFPFVYKPSRGNGKEGIRTFHDLEEWENFLQSKKKS
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QKSPKKKTKAHNVVPEEWISEEFIPGFEITVCGLIQNGEFFPASISHKDVTHYAPYLEIA
HCCCHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
HTLPFLHSELIGEILLNCRALIAATKMNNCPFVAEFRINPQGEIYLIEAVPEVGGEFLAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHH
NLIPNYFGSSYFENLVKLLVGEKIKPFPNYFKISNRYAGIFFSAPPEGKSKLVEHSEFHT
HCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHCC
NGKEKLIFDSKLKQPGDVLKTNEGNGVRTRSIGILSPQENHQTLAQWKESVLQRLEGKFE
CCCCEEEECCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
SV
CC
>Mature Secondary Structure 
TFLHINKNLRKMKDYFLSIGAGPNQVPLISAANKLGYLVIAVDQNDRAPGLNISSLRIM
EEEEECHHHHHHHHHHEECCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHH
ESVTEYRKILKTVSEIPLQGNILGIGTRSFGKATYTASYIANKLKLRYASLECVEICSNK
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
NKLKEVASRVGILTPQNYDTNSKHLFPFVYKPSRGNGKEGIRTFHDLEEWENFLQSKKKS
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QKSPKKKTKAHNVVPEEWISEEFIPGFEITVCGLIQNGEFFPASISHKDVTHYAPYLEIA
HCCCHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
HTLPFLHSELIGEILLNCRALIAATKMNNCPFVAEFRINPQGEIYLIEAVPEVGGEFLAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHH
NLIPNYFGSSYFENLVKLLVGEKIKPFPNYFKISNRYAGIFFSAPPEGKSKLVEHSEFHT
HCCHHHCCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHCC
NGKEKLIFDSKLKQPGDVLKTNEGNGVRTRSIGILSPQENHQTLAQWKESVLQRLEGKFE
CCCCEEEECCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
SV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA