Click here to switch to the map view.

The map label for this gene is 45657212

Identifier: 45657212

GI number: 45657212

Start: 1646210

End: 1646881

Strand: Reverse

Name: 45657212

Synonym: LIC11334

Alternate gene names: NA

Gene position: 1646881-1646210 (Counterclockwise)

Preceding gene: 45657213

Following gene: 45657210

Centisome position: 38.5

GC content: 34.67

Gene sequence:

>672_bases
ATGATTCGTCCAATTTTTCTATTTCTATTGATTTTACTTACTACCTCTGGAATTTACTCCGAAAACAAACAACAAACGAT
CACCGTTATCGGAAATGGCTCTGCAATTGTAGAAACCGATTACGTTCAAATCAATTTTTCCGTCGAAGTAGAAAACCCAG
ACCCTAAGGTCGCTCAAGAAAAAAACTTGGAAAGAGTGTCTAACGTTATCCAGGCTCTTTCTAAAAGATTCAAAATTTCG
AATAAAGATATTTACAGTACCGATTACACTCTCCAAAGACAATATTTACAAGAAGGAAAACAAAGACCTTATCTTGCGTC
TTCTGGAATTCTACTGAAACTCAGAGATCTCAAACTCTATAAAGATTTACTATTAGAGATTCAAAGTTTAGGAGTCAACA
CAGTAAGTGGAATTGAATTTAAAGCAGATTCCACTAAAAAACAAGAAAAAGAAGCCTTAGTAGACGCTTTCGAAGACGCA
AAAAACAAGGCTCTGGTTCTGGCAAAATCAATCGGAAAAACAAACGTAACCACAATCAAAATAGTAGAATCTGATTCTAT
ATTACAACCCCAAGTAGTTTATTTTATGAAAGGAAGAGCAGATCAACCTCCTATTTCAATTGGTGAGAGAACTCTACAGG
CAAGAGTTAGTATTGAATTTGAAGTTCAGTAA

Upstream 100 bases:

>100_bases
ATCCGAACTTTCTTTTCCAATCGCAAAAGGCGGCGGAGGTTTTCCTCTACCGCCTTTTTTTGTAGGCAATAAATGGATCC
TAAAAAATCATTCACAAACT

Downstream 100 bases:

>100_bases
AATGTTTTAATACCTTAATAACTTGGTTCGACGTAATAAAATTAGGGCGAATCCCGCCAATGGTTTGTAAAAGAAAGATT
AAATGAAACAAGCGGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MIRPIFLFLLILLTTSGIYSENKQQTITVIGNGSAIVETDYVQINFSVEVENPDPKVAQEKNLERVSNVIQALSKRFKIS
NKDIYSTDYTLQRQYLQEGKQRPYLASSGILLKLRDLKLYKDLLLEIQSLGVNTVSGIEFKADSTKKQEKEALVDAFEDA
KNKALVLAKSIGKTNVTTIKIVESDSILQPQVVYFMKGRADQPPISIGERTLQARVSIEFEVQ

Sequences:

>Translated_223_residues
MIRPIFLFLLILLTTSGIYSENKQQTITVIGNGSAIVETDYVQINFSVEVENPDPKVAQEKNLERVSNVIQALSKRFKIS
NKDIYSTDYTLQRQYLQEGKQRPYLASSGILLKLRDLKLYKDLLLEIQSLGVNTVSGIEFKADSTKKQEKEALVDAFEDA
KNKALVLAKSIGKTNVTTIKIVESDSILQPQVVYFMKGRADQPPISIGERTLQARVSIEFEVQ
>Mature_223_residues
MIRPIFLFLLILLTTSGIYSENKQQTITVIGNGSAIVETDYVQINFSVEVENPDPKVAQEKNLERVSNVIQALSKRFKIS
NKDIYSTDYTLQRQYLQEGKQRPYLASSGILLKLRDLKLYKDLLLEIQSLGVNTVSGIEFKADSTKKQEKEALVDAFEDA
KNKALVLAKSIGKTNVTTIKIVESDSILQPQVVYFMKGRADQPPISIGERTLQARVSIEFEVQ

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25117; Mature: 25117

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPIFLFLLILLTTSGIYSENKQQTITVIGNGSAIVETDYVQINFSVEVENPDPKVAQE
CCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEECCCCCCCHHH
KNLERVSNVIQALSKRFKISNKDIYSTDYTLQRQYLQEGKQRPYLASSGILLKLRDLKLY
CCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCCCCEEECCCEEEEEHHHHHH
KDLLLEIQSLGVNTVSGIEFKADSTKKQEKEALVDAFEDAKNKALVLAKSIGKTNVTTIK
HHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEE
IVESDSILQPQVVYFMKGRADQPPISIGERTLQARVSIEFEVQ
EECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MIRPIFLFLLILLTTSGIYSENKQQTITVIGNGSAIVETDYVQINFSVEVENPDPKVAQE
CCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEECCCCCCCHHH
KNLERVSNVIQALSKRFKISNKDIYSTDYTLQRQYLQEGKQRPYLASSGILLKLRDLKLY
CCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCCCCEEECCCEEEEEHHHHHH
KDLLLEIQSLGVNTVSGIEFKADSTKKQEKEALVDAFEDAKNKALVLAKSIGKTNVTTIK
HHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEE
IVESDSILQPQVVYFMKGRADQPPISIGERTLQARVSIEFEVQ
EECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA