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The map label for this gene is lemA

Identifier: 45656942

GI number: 45656942

Start: 1303317

End: 1303913

Strand: Reverse

Name: lemA

Synonym: LIC11058

Alternate gene names: 45656942

Gene position: 1303913-1303317 (Counterclockwise)

Preceding gene: 45656943

Following gene: 45656941

Centisome position: 30.49

GC content: 34.34

Gene sequence:

>597_bases
TTGAAAACTAAAATTGATTTCAAATTGTTTTTGATAACGACTCTGACTCTTTTGGTTTTCTCCAATTGCGGTTATAATAC
AATTCAAGAAGAAGATGAGGCGATCAACGCATCTTGGGCGGAAATACTCAATCAATACCAGAGGAGATCGGATCTAATTC
CAAATCTGGTTAACACAGTAAAAGGTTATGCAACCCAAGAAGAAAAAGTATTGATCGCAGTAACAAAAGCCAGAGCGGGA
GTAGGTTCCATTCAAGCAGATGAAAAAACTTTAAATAATCCCGAACTTTTTAAAAAATATTCACAAGCGCAAGCACAGAT
GACTTCCGCACTTTCTAAACTACTTGTAATTGCAGAAAATTATCCCGAATTAAAATCCAACGAAAACTTTAGAGATCTAC
AAGCTCAACTAGAAGGAACCGAAAACAGAATTACCGTAGCCAGAAACAGATATATTCAAGCGGTACAAAAATACAACGTT
ACAATTCGAAAATTTCCAAATAATTTAACTGCAAAGTTTTTCGGATTCGAAACCAAACCTTCTTTTAGTGTAGAAAACGA
AAAAGAAATTTCTAAACCGCCTGAAGTTAAATTTTAA

Upstream 100 bases:

>100_bases
TTTTACGGATATAGAAGAAGATTTTCCGTTTTAAAAAATTTGATTTACGTCTTAGTATAAAAATAAAAAAAATCCATCCT
GATTAGGAGAAAGAAATTTT

Downstream 100 bases:

>100_bases
AAAAATTGAATATTCTTAAGCACTTACCTACTTTCACTTTCTACTTTTTTAAAACACAAGAAAATTTAAATTCTATTTTA
TCTCAAATAGAATGTTTAAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKTKIDFKLFLITTLTLLVFSNCGYNTIQEEDEAINASWAEILNQYQRRSDLIPNLVNTVKGYATQEEKVLIAVTKARAG
VGSIQADEKTLNNPELFKKYSQAQAQMTSALSKLLVIAENYPELKSNENFRDLQAQLEGTENRITVARNRYIQAVQKYNV
TIRKFPNNLTAKFFGFETKPSFSVENEKEISKPPEVKF

Sequences:

>Translated_198_residues
MKTKIDFKLFLITTLTLLVFSNCGYNTIQEEDEAINASWAEILNQYQRRSDLIPNLVNTVKGYATQEEKVLIAVTKARAG
VGSIQADEKTLNNPELFKKYSQAQAQMTSALSKLLVIAENYPELKSNENFRDLQAQLEGTENRITVARNRYIQAVQKYNV
TIRKFPNNLTAKFFGFETKPSFSVENEKEISKPPEVKF
>Mature_198_residues
MKTKIDFKLFLITTLTLLVFSNCGYNTIQEEDEAINASWAEILNQYQRRSDLIPNLVNTVKGYATQEEKVLIAVTKARAG
VGSIQADEKTLNNPELFKKYSQAQAQMTSALSKLLVIAENYPELKSNENFRDLQAQLEGTENRITVARNRYIQAVQKYNV
TIRKFPNNLTAKFFGFETKPSFSVENEKEISKPPEVKF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22596; Mature: 22596

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKIDFKLFLITTLTLLVFSNCGYNTIQEEDEAINASWAEILNQYQRRSDLIPNLVNTV
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
KGYATQEEKVLIAVTKARAGVGSIQADEKTLNNPELFKKYSQAQAQMTSALSKLLVIAEN
HCCCCCCCEEEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
YPELKSNENFRDLQAQLEGTENRITVARNRYIQAVQKYNVTIRKFPNNLTAKFFGFETKP
CCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCC
SFSVENEKEISKPPEVKF
CCCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MKTKIDFKLFLITTLTLLVFSNCGYNTIQEEDEAINASWAEILNQYQRRSDLIPNLVNTV
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
KGYATQEEKVLIAVTKARAGVGSIQADEKTLNNPELFKKYSQAQAQMTSALSKLLVIAEN
HCCCCCCCEEEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
YPELKSNENFRDLQAQLEGTENRITVARNRYIQAVQKYNVTIRKFPNNLTAKFFGFETKP
CCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCC
SFSVENEKEISKPPEVKF
CCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]