| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is ygcG [H]
Identifier: 45656941
GI number: 45656941
Start: 1301784
End: 1303154
Strand: Reverse
Name: ygcG [H]
Synonym: LIC11057
Alternate gene names: 45656941
Gene position: 1303154-1301784 (Counterclockwise)
Preceding gene: 45656942
Following gene: 45656940
Centisome position: 30.47
GC content: 33.92
Gene sequence:
>1371_bases ATGAATCTTTTAAAAGCTCGAATGATCCAATCGGTAACTATAAAAATTTTATTCTCTGTATGTCTTTTAGTATGTACAGC AGGAATTCATTTAAAAATTGGAAATTCACATTCCACTTTTATCATAGAAGAATGGAAAGCAGAAGATCAAATCATTCCCC TACTACACTCTCCGGTTACGGATGCGACTTTCACTCTAACAAAAGAACAAAAGGTTCAACTCACAAACAGATTAATTTCA TTTGAAACAAAAAAAGGAAGTCAAATCGCAGTATTGATCGTAGGTTCTACGGGTGAATGGAGCATAGAAGAATACGCACT CAAAGTATTCGAAAAAACTAAATTAGGTCGTAAAGGAATCGACGATGGAATACTAATCGTAGTAGCAATCCAAGACCATA AAACGAAAATAGAAGTTGGTTACGGACTGGAAGGAACTATACCCGACGCAATTGCAAAAAGAATCATAGAAGAATTTATG ATTCCTCATTTTAAAAACGGAGATTACTTCCAAGGAGTTTCAGACGGAATCGACACGCTCATTTTGAAAATCGACGGAGA GGAATTACCGGAAACAAATAAAATTCCAAAATTTTTTGAAGTAATCAATAAATATTCAATGTATATCTTTCCCTCTCTTA TATTGGTCATTCTTATAATCACCATCTTTATTACATCTGGAATCTTTGGTACAATTGTATTGATAGGTGGCGGATTTTTT TTAATACTAATGTTAGAATCCATAATATTGTTAGTTATCATTTTCTTTCCATTGATCTTTTTCTTTTTAATGGCATCGCA TTTAAGAAAGAAAATACGAATACGACGAAAATCTTTTATAACGCCCACAAATTGGGATTATATTATAATCGCCGTTTTTA TTATATTAGGAATCGTTAGTACAATTGGATTGATAGGATTCGGAATTTTTAGAGGACTCATATCAGAATCTACAATATTA GGAATTAGTATTTTAATTTTATTGATCTTTTTCTTTTTAATGACAGGGTATCTAAGAAAAAAAATACAACGGAAATCTTT TTGGGATTATATTATAATCGCCGTCTTTATTATATTGGGAATCGTTAGCACAATTGGATTAGTAGGATTCGGAATTTTTA GAGGACTTATATCAGAATCTATGATATTAGGAATCCCATTAATTCTTTTCTTTTTAATCATGGGATATCTAAGAGATAAA ATACGACGGAAATCTTTTTGGGATTACATTCTATTCGGCACCGGAACTTCATCCTCCGGTTCTTCTTCCCGTTCCTCTTG GGGAAGTAGCGGTTCAAGTTCAAGCGGAGGAAGTTCCTGGAGTGGTGGTGGAGGTAGTTCGGGGGGCGGAGGGGCTTCGG GAAGTTGGTAA
Upstream 100 bases:
>100_bases AATTTAAATTCTATTTTATCTCAAATAGAATGTTTAATAAAACCTATCATCAAAATTGAATCTAGATGATTCATCTCAAT CAAATATAACAGCATAAAAA
Downstream 100 bases:
>100_bases AGAATATTTAATATTATGATAAATCAATATACAAACAAAAAAGCCACCATTCTAAGAATTTGGAATCATACCTTAGAATC CGTTCTGTCCTTTTTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MNLLKARMIQSVTIKILFSVCLLVCTAGIHLKIGNSHSTFIIEEWKAEDQIIPLLHSPVTDATFTLTKEQKVQLTNRLIS FETKKGSQIAVLIVGSTGEWSIEEYALKVFEKTKLGRKGIDDGILIVVAIQDHKTKIEVGYGLEGTIPDAIAKRIIEEFM IPHFKNGDYFQGVSDGIDTLILKIDGEELPETNKIPKFFEVINKYSMYIFPSLILVILIITIFITSGIFGTIVLIGGGFF LILMLESIILLVIIFFPLIFFFLMASHLRKKIRIRRKSFITPTNWDYIIIAVFIILGIVSTIGLIGFGIFRGLISESTIL GISILILLIFFFLMTGYLRKKIQRKSFWDYIIIAVFIILGIVSTIGLVGFGIFRGLISESMILGIPLILFFLIMGYLRDK IRRKSFWDYILFGTGTSSSGSSSRSSWGSSGSSSSGGSSWSGGGGSSGGGGASGSW
Sequences:
>Translated_456_residues MNLLKARMIQSVTIKILFSVCLLVCTAGIHLKIGNSHSTFIIEEWKAEDQIIPLLHSPVTDATFTLTKEQKVQLTNRLIS FETKKGSQIAVLIVGSTGEWSIEEYALKVFEKTKLGRKGIDDGILIVVAIQDHKTKIEVGYGLEGTIPDAIAKRIIEEFM IPHFKNGDYFQGVSDGIDTLILKIDGEELPETNKIPKFFEVINKYSMYIFPSLILVILIITIFITSGIFGTIVLIGGGFF LILMLESIILLVIIFFPLIFFFLMASHLRKKIRIRRKSFITPTNWDYIIIAVFIILGIVSTIGLIGFGIFRGLISESTIL GISILILLIFFFLMTGYLRKKIQRKSFWDYIIIAVFIILGIVSTIGLVGFGIFRGLISESMILGIPLILFFLIMGYLRDK IRRKSFWDYILFGTGTSSSGSSSRSSWGSSGSSSSGGSSWSGGGGSSGGGGASGSW >Mature_456_residues MNLLKARMIQSVTIKILFSVCLLVCTAGIHLKIGNSHSTFIIEEWKAEDQIIPLLHSPVTDATFTLTKEQKVQLTNRLIS FETKKGSQIAVLIVGSTGEWSIEEYALKVFEKTKLGRKGIDDGILIVVAIQDHKTKIEVGYGLEGTIPDAIAKRIIEEFM IPHFKNGDYFQGVSDGIDTLILKIDGEELPETNKIPKFFEVINKYSMYIFPSLILVILIITIFITSGIFGTIVLIGGGFF LILMLESIILLVIIFFPLIFFFLMASHLRKKIRIRRKSFITPTNWDYIIIAVFIILGIVSTIGLIGFGIFRGLISESTIL GISILILLIFFFLMTGYLRKKIQRKSFWDYIIIAVFIILGIVSTIGLVGFGIFRGLISESMILGIPLILFFLIMGYLRDK IRRKSFWDYILFGTGTSSSGSSSRSSWGSSGSSSSGGSSWSGGGGSSGGGGASGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=155, Percent_Identity=40.6451612903226, Blast_Score=112, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 50442; Mature: 50442
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKARMIQSVTIKILFSVCLLVCTAGIHLKIGNSHSTFIIEEWKAEDQIIPLLHSPVT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEHHHCCCCC DATFTLTKEQKVQLTNRLISFETKKGSQIAVLIVGSTGEWSIEEYALKVFEKTKLGRKGI CCEEEECHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC DDGILIVVAIQDHKTKIEVGYGLEGTIPDAIAKRIIEEFMIPHFKNGDYFQGVSDGIDTL CCCEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEE ILKIDGEELPETNKIPKFFEVINKYSMYIFPSLILVILIITIFITSGIFGTIVLIGGGFF EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILMLESIILLVIIFFPLIFFFLMASHLRKKIRIRRKSFITPTNWDYIIIAVFIILGIVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH TIGLIGFGIFRGLISESTILGISILILLIFFFLMTGYLRKKIQRKSFWDYIIIAVFIILG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVSTIGLVGFGIFRGLISESMILGIPLILFFLIMGYLRDKIRRKSFWDYILFGTGTSSSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC SSSRSSWGSSGSSSSGGSSWSGGGGSSGGGGASGSW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLLKARMIQSVTIKILFSVCLLVCTAGIHLKIGNSHSTFIIEEWKAEDQIIPLLHSPVT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEHHHCCCCC DATFTLTKEQKVQLTNRLISFETKKGSQIAVLIVGSTGEWSIEEYALKVFEKTKLGRKGI CCEEEECHHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC DDGILIVVAIQDHKTKIEVGYGLEGTIPDAIAKRIIEEFMIPHFKNGDYFQGVSDGIDTL CCCEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEE ILKIDGEELPETNKIPKFFEVINKYSMYIFPSLILVILIITIFITSGIFGTIVLIGGGFF EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILMLESIILLVIIFFPLIFFFLMASHLRKKIRIRRKSFITPTNWDYIIIAVFIILGIVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH TIGLIGFGIFRGLISESTILGISILILLIFFFLMTGYLRKKIQRKSFWDYIIIAVFIILG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVSTIGLVGFGIFRGLISESMILGIPLILFFLIMGYLRDKIRRKSFWDYILFGTGTSSSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC SSSRSSWGSSGSSSSGGSSWSGGGGSSGGGGASGSW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]