Click here to switch to the map view.

The map label for this gene is 45656914

Identifier: 45656914

GI number: 45656914

Start: 1269359

End: 1270393

Strand: Reverse

Name: 45656914

Synonym: LIC11030

Alternate gene names: NA

Gene position: 1270393-1269359 (Counterclockwise)

Preceding gene: 45656918

Following gene: 45656913

Centisome position: 29.7

GC content: 39.03

Gene sequence:

>1035_bases
ATGACACGATTTTTATTGCTATGCCTTAGCATCATTTTACTGTTAGGTGGTTGTACAAACGAAAAAGAAGGTAAAGAATC
CGACTTAGCACTTCTATCCGGAATTATCGACCCAACGAATTTGTACATATCTAATCCAGATCAAAATGATTCTCGGAGTC
TAACTATCCGAATACCTATCTATGTAGATAACGTTATCGGAAATGATAACTGGCCGGGCTCTAATAAGGGCGCACCACTT
CGAACCATCACCAAAGCGATTGCTTTGGCAGGAGGCAGACACGACGTCCATGTTGCACCAGGTGAATACTCCGAACAAAC
CGGAGAAAAATTTCCAATTCGAATTCCGGATGGAGCTACTCTGATTGGGGATGAATTAGGAAAAGGATTAGGTTTCGTTT
TATTCTATGATAAATCAGGAAACCATCCAGGTCCAAAACCAACTACAATTCAATTTCATGCAGATGATCTTAAAGAAACA
ATCCTACTCGGAGAAAACTCTACCATAGCTGGATTCAATTTACAGAACCCAATTGCTTTGAGAGCATACGGTTCTAAAAT
TAGAAACAATACAATCTCCCAAGGAATCGGAATTTTCCCTGCAAACACATCTAACGTACCATCCGGAGGACATACTATCA
GCGGAAACTTTATCGGCTCCAAAAAAGCACCTAACTATAACTATGGAGTAGGTATCTTTGTAGATAGAACTACTTACGAA
AATAAAATAGAGAATAATACGATTTATCGAAACCGATACGGAGTTGTCATCCGTCCGCTAGGTAAAGCGGATTTAGGCGG
AGGTTCTCAAGGAAGCGTTGGAAATAATATTATTTCTTGCAGCTTAGAAATGGACTTAACGTTTCTATTTGATATAAACA
CGAGACTTTATGCACAAAATATCAAATTGGATCACAATCCTCCTACCTATGAGAGCTCACAAAATTTTCCAAAAGGAGTT
GATATATACAGACCGGGACCTTACGGAACCATAGATATATCTGGATATTCTTTGGCTCCAAATCCTTGCAACTAA

Upstream 100 bases:

>100_bases
TTTCACTTTTGTGAAAAATATCCAAACAAATCTGTTAATTGAGCTAATTTGACGATGAGAAGTAAAAAATTTTTATCGTC
GCCCAAATCAGGAGAAATCA

Downstream 100 bases:

>100_bases
TAAGTATTAGGTGATATTAATCTTTTAGAGTAAATCGACCTTTCCAACTTTGGAAAGGTCGTTTTTAGACTTGCAATGTA
TCAAATATTCAGAAAATATA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTRFLLLCLSIILLLGGCTNEKEGKESDLALLSGIIDPTNLYISNPDQNDSRSLTIRIPIYVDNVIGNDNWPGSNKGAPL
RTITKAIALAGGRHDVHVAPGEYSEQTGEKFPIRIPDGATLIGDELGKGLGFVLFYDKSGNHPGPKPTTIQFHADDLKET
ILLGENSTIAGFNLQNPIALRAYGSKIRNNTISQGIGIFPANTSNVPSGGHTISGNFIGSKKAPNYNYGVGIFVDRTTYE
NKIENNTIYRNRYGVVIRPLGKADLGGGSQGSVGNNIISCSLEMDLTFLFDINTRLYAQNIKLDHNPPTYESSQNFPKGV
DIYRPGPYGTIDISGYSLAPNPCN

Sequences:

>Translated_344_residues
MTRFLLLCLSIILLLGGCTNEKEGKESDLALLSGIIDPTNLYISNPDQNDSRSLTIRIPIYVDNVIGNDNWPGSNKGAPL
RTITKAIALAGGRHDVHVAPGEYSEQTGEKFPIRIPDGATLIGDELGKGLGFVLFYDKSGNHPGPKPTTIQFHADDLKET
ILLGENSTIAGFNLQNPIALRAYGSKIRNNTISQGIGIFPANTSNVPSGGHTISGNFIGSKKAPNYNYGVGIFVDRTTYE
NKIENNTIYRNRYGVVIRPLGKADLGGGSQGSVGNNIISCSLEMDLTFLFDINTRLYAQNIKLDHNPPTYESSQNFPKGV
DIYRPGPYGTIDISGYSLAPNPCN
>Mature_343_residues
TRFLLLCLSIILLLGGCTNEKEGKESDLALLSGIIDPTNLYISNPDQNDSRSLTIRIPIYVDNVIGNDNWPGSNKGAPLR
TITKAIALAGGRHDVHVAPGEYSEQTGEKFPIRIPDGATLIGDELGKGLGFVLFYDKSGNHPGPKPTTIQFHADDLKETI
LLGENSTIAGFNLQNPIALRAYGSKIRNNTISQGIGIFPANTSNVPSGGHTISGNFIGSKKAPNYNYGVGIFVDRTTYEN
KIENNTIYRNRYGVVIRPLGKADLGGGSQGSVGNNIISCSLEMDLTFLFDINTRLYAQNIKLDHNPPTYESSQNFPKGVD
IYRPGPYGTIDISGYSLAPNPCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37206; Mature: 37075

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFLLLCLSIILLLGGCTNEKEGKESDLALLSGIIDPTNLYISNPDQNDSRSLTIRIPI
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEE
YVDNVIGNDNWPGSNKGAPLRTITKAIALAGGRHDVHVAPGEYSEQTGEKFPIRIPDGAT
EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHCCCCCCEECCCCCE
LIGDELGKGLGFVLFYDKSGNHPGPKPTTIQFHADDLKETILLGENSTIAGFNLQNPIAL
EEHHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEEE
RAYGSKIRNNTISQGIGIFPANTSNVPSGGHTISGNFIGSKKAPNYNYGVGIFVDRTTYE
EECCHHHHCCHHHCCCEEEECCCCCCCCCCCEEECCEECCCCCCCCCCCEEEEEECCCCC
NKIENNTIYRNRYGVVIRPLGKADLGGGSQGSVGNNIISCSLEMDLTFLFDINTRLYAQN
CCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCEEEEEE
IKLDHNPPTYESSQNFPKGVDIYRPGPYGTIDISGYSLAPNPCN
EEECCCCCCCCCCCCCCCCCEEECCCCCCEEEECCEECCCCCCC
>Mature Secondary Structure 
TRFLLLCLSIILLLGGCTNEKEGKESDLALLSGIIDPTNLYISNPDQNDSRSLTIRIPI
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEE
YVDNVIGNDNWPGSNKGAPLRTITKAIALAGGRHDVHVAPGEYSEQTGEKFPIRIPDGAT
EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHCCCCCCEECCCCCE
LIGDELGKGLGFVLFYDKSGNHPGPKPTTIQFHADDLKETILLGENSTIAGFNLQNPIAL
EEHHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEEE
RAYGSKIRNNTISQGIGIFPANTSNVPSGGHTISGNFIGSKKAPNYNYGVGIFVDRTTYE
EECCHHHHCCHHHCCCEEEECCCCCCCCCCCEEECCEECCCCCCCCCCCEEEEEECCCCC
NKIENNTIYRNRYGVVIRPLGKADLGGGSQGSVGNNIISCSLEMDLTFLFDINTRLYAQN
CCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCEEEEEE
IKLDHNPPTYESSQNFPKGVDIYRPGPYGTIDISGYSLAPNPCN
EEECCCCCCCCCCCCCCCCCEEECCCCCCEEEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA