Click here to switch to the map view.

The map label for this gene is 45656913

Identifier: 45656913

GI number: 45656913

Start: 1268775

End: 1269086

Strand: Reverse

Name: 45656913

Synonym: LIC11029

Alternate gene names: NA

Gene position: 1269086-1268775 (Counterclockwise)

Preceding gene: 45656914

Following gene: 45656908

Centisome position: 29.67

GC content: 36.86

Gene sequence:

>312_bases
TTGTTTAAACTGGATCTTACAATTTACCGTAACAGAAATGGAATTGAAGTTGCTCCGAGTGGTTTAATTGACTTAGTTGG
AGGTCCTACAGGAAGTGTAGGCAATAATATTCTTTCTTGTAGTGAATTCTCGGATCTAACTTTCGAATTCAATTCGTATC
AGTTTATTTCCGCTCGAAATAACAAATGGGATCACAGTCCCCCAACGTTTAACCCTTTAGACGGCACATATAGAACAGAC
ATAAACAGATACAATTTAGGTAATGTAGATATTGCAGGACATCAGGTAGCACTAAATCCTTGTGAGAGATAA

Upstream 100 bases:

>100_bases
AGAATGTTTTTTAATCGTTGTATGAGGTAAAAGCAAAATAGTATGTTCGATATACTCGTTTAGTCTTAAAACTCTAAACA
GCTTTTATATAAAATCAAAA

Downstream 100 bases:

>100_bases
TCACCTAAAAACATTATTAAAAAAGATTAATATAACGTGAGTTCTATGTAAGTAGATCTGGGCGAATCCGGCTTGCCACA
GGCAGCCGGACCGGGCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MFKLDLTIYRNRNGIEVAPSGLIDLVGGPTGSVGNNILSCSEFSDLTFEFNSYQFISARNNKWDHSPPTFNPLDGTYRTD
INRYNLGNVDIAGHQVALNPCER

Sequences:

>Translated_103_residues
MFKLDLTIYRNRNGIEVAPSGLIDLVGGPTGSVGNNILSCSEFSDLTFEFNSYQFISARNNKWDHSPPTFNPLDGTYRTD
INRYNLGNVDIAGHQVALNPCER
>Mature_103_residues
MFKLDLTIYRNRNGIEVAPSGLIDLVGGPTGSVGNNILSCSEFSDLTFEFNSYQFISARNNKWDHSPPTFNPLDGTYRTD
INRYNLGNVDIAGHQVALNPCER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11483; Mature: 11483

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLDLTIYRNRNGIEVAPSGLIDLVGGPTGSVGNNILSCSEFSDLTFEFNSYQFISARN
CEEEEEEEEECCCCCEECCCCEEEEECCCCCCCCCCEEECCCCCCEEEEECCEEEEEECC
NKWDHSPPTFNPLDGTYRTDINRYNLGNVDIAGHQVALNPCER
CCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCEEECCCCCC
>Mature Secondary Structure
MFKLDLTIYRNRNGIEVAPSGLIDLVGGPTGSVGNNILSCSEFSDLTFEFNSYQFISARN
CEEEEEEEEECCCCCEECCCCEEEEECCCCCCCCCCEEECCCCCCEEEEECCEEEEEECC
NKWDHSPPTFNPLDGTYRTDINRYNLGNVDIAGHQVALNPCER
CCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA