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The map label for this gene is 45656874

Identifier: 45656874

GI number: 45656874

Start: 1193054

End: 1193473

Strand: Reverse

Name: 45656874

Synonym: LIC10986

Alternate gene names: NA

Gene position: 1193473-1193054 (Counterclockwise)

Preceding gene: 45656883

Following gene: 45656871

Centisome position: 27.9

GC content: 32.14

Gene sequence:

>420_bases
ATGGAATTTTTTATCAGTTCTGAAATTGACGGACGTTTTAGTCAAAACGTTCCAGACAAATTTCGCCGCGTTAGAAAAAA
TGTAGGATCAATTCTAAACAAACATTTCTTAGATAAAGACTATGGAGCTAATATTAAATCCATTGGTGTAATCCCTATCT
TAATCCGTACGGATCTTAAAGAATTTTATAAAGAACGTAAACTCTATCAGAAAAAACAAAATTCCGCAGACTACCGACTT
TATATTGATTTTGAGAGTTTCGAAAAAGCAAATGACGACATCGCAACCAATCTTTTAGTTCAAAATATTTTAGCAGTAGT
TCAAGATCTGGGACGAAAAGTTAGTTCTTTCGATGCGACAAGTTTAGAAAACGAGATTAAAAACTTATTTCCACTATACA
TATCACATAACGTTCATTAG

Upstream 100 bases:

>100_bases
TCACTTCTATTGGCGCTTGACAGATTTTTATTATACTAAATCACGTTATCGTAAAATTTTATTCTTTACCTTGAAAAAAA
ATAATTTAAAATAAACCAAG

Downstream 100 bases:

>100_bases
CCGTTTTAATTTCAGAATTTATCTGTTATTCAGAATTATATAATAAAATATCGAATCATTTACACTTCAATAATGTGAAT
TTTACGTAAGAAAGATTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MEFFISSEIDGRFSQNVPDKFRRVRKNVGSILNKHFLDKDYGANIKSIGVIPILIRTDLKEFYKERKLYQKKQNSADYRL
YIDFESFEKANDDIATNLLVQNILAVVQDLGRKVSSFDATSLENEIKNLFPLYISHNVH

Sequences:

>Translated_139_residues
MEFFISSEIDGRFSQNVPDKFRRVRKNVGSILNKHFLDKDYGANIKSIGVIPILIRTDLKEFYKERKLYQKKQNSADYRL
YIDFESFEKANDDIATNLLVQNILAVVQDLGRKVSSFDATSLENEIKNLFPLYISHNVH
>Mature_139_residues
MEFFISSEIDGRFSQNVPDKFRRVRKNVGSILNKHFLDKDYGANIKSIGVIPILIRTDLKEFYKERKLYQKKQNSADYRL
YIDFESFEKANDDIATNLLVQNILAVVQDLGRKVSSFDATSLENEIKNLFPLYISHNVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16221; Mature: 16221

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFISSEIDGRFSQNVPDKFRRVRKNVGSILNKHFLDKDYGANIKSIGVIPILIRTDLK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
EFYKERKLYQKKQNSADYRLYIDFESFEKANDDIATNLLVQNILAVVQDLGRKVSSFDAT
HHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SLENEIKNLFPLYISHNVH
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEFFISSEIDGRFSQNVPDKFRRVRKNVGSILNKHFLDKDYGANIKSIGVIPILIRTDLK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
EFYKERKLYQKKQNSADYRLYIDFESFEKANDDIATNLLVQNILAVVQDLGRKVSSFDAT
HHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SLENEIKNLFPLYISHNVH
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA