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The map label for this gene is 45656870

Identifier: 45656870

GI number: 45656870

Start: 1187747

End: 1188652

Strand: Reverse

Name: 45656870

Synonym: LIC10982

Alternate gene names: NA

Gene position: 1188652-1187747 (Counterclockwise)

Preceding gene: 45656871

Following gene: 45656869

Centisome position: 27.79

GC content: 35.65

Gene sequence:

>906_bases
ATGTTTCACATAAGACACGAAATTTATCTTATCCTCTGCACCTTGATATGGGGAGGAACCTTTACAATGACTATTTTCGG
TCTCAGAGACACTTCGCCTTCTATATTTCTGGGACTTCGTTTTGGAATCGCAAGTATGATCTTTTTACCGTTCGCCTGGA
AAGAATTTAGAAAGGGTAAAATTTGGTACCCGGGGGCATTTTTACTCGGAATGTTTTTATATCTCGGATTTGCATGCGAA
ACCATAGGACTCAAAACTACAACTGCAACTAAATCCTCTTTTTTAATAGGAACGTTAGTCGTAATTACTCCAATTTTTGA
AGCAATTTTAAAAAAAAGAATGCCCGGAAAAGGAAATCTTTTAGGAGCTTCTGTGGTTTTTACCGGAATATGTCTGATAT
TTGCGGGAGAAATCGGAATGGAAGGCACTCTAACAATTACAAACGGCGACTGGATCACGTTAGGTGGAGCAATTTTTTTT
TCGTTGTATATCATACAAATGGACAGAGTAAGTATCCAAATACCAATTCGAATATCCGTTTTTTATCAATCCTTTGTGGC
GGGATTTTTTGCGTTGATTTCTGTAATCATATTACATTTTGTAGGAATTGAAAAAATTAGATTAAATCCAAGTGCAAGAT
TAATTCCAGGAGTATTGTACAACGCACTTTTGGCTTCCGTATTAACTACGTTTTTACAAACTAAATTTCAACGTTATGTG
TCACCTACTCGTGTGGGAATTATCTTTTCTTTGGAACCAGTTTTTTCCTCAATTATCGCTTTTCTATTATTAGGTGAGAA
ATCAGGGCCAGTACGAATTGTAGGATGTACAATTGTATTTTTAGGACTCATTCTTGCGGAATCTATCGGAAAAGATCAAA
ACTTATCAATGGAAAACACAAATTAA

Upstream 100 bases:

>100_bases
TTAAAATTTCGAAAGAAGGTTACGAACCGACAGAAATACAAACCAGACCAAACGGCAAATGGGAACCTCTAAAAATCGTA
CTTAAGAAAAATAGAATATA

Downstream 100 bases:

>100_bases
TAGAGTTGTTGAAAAATTCTATAGTGGAGTCTAACAAAACTACTTCAATTGACCTAGTAACATAAAAGTAGACACCTTTT
TTTCCAAGAATAGAGGTAAA

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MFHIRHEIYLILCTLIWGGTFTMTIFGLRDTSPSIFLGLRFGIASMIFLPFAWKEFRKGKIWYPGAFLLGMFLYLGFACE
TIGLKTTTATKSSFLIGTLVVITPIFEAILKKRMPGKGNLLGASVVFTGICLIFAGEIGMEGTLTITNGDWITLGGAIFF
SLYIIQMDRVSIQIPIRISVFYQSFVAGFFALISVIILHFVGIEKIRLNPSARLIPGVLYNALLASVLTTFLQTKFQRYV
SPTRVGIIFSLEPVFSSIIAFLLLGEKSGPVRIVGCTIVFLGLILAESIGKDQNLSMENTN

Sequences:

>Translated_301_residues
MFHIRHEIYLILCTLIWGGTFTMTIFGLRDTSPSIFLGLRFGIASMIFLPFAWKEFRKGKIWYPGAFLLGMFLYLGFACE
TIGLKTTTATKSSFLIGTLVVITPIFEAILKKRMPGKGNLLGASVVFTGICLIFAGEIGMEGTLTITNGDWITLGGAIFF
SLYIIQMDRVSIQIPIRISVFYQSFVAGFFALISVIILHFVGIEKIRLNPSARLIPGVLYNALLASVLTTFLQTKFQRYV
SPTRVGIIFSLEPVFSSIIAFLLLGEKSGPVRIVGCTIVFLGLILAESIGKDQNLSMENTN
>Mature_301_residues
MFHIRHEIYLILCTLIWGGTFTMTIFGLRDTSPSIFLGLRFGIASMIFLPFAWKEFRKGKIWYPGAFLLGMFLYLGFACE
TIGLKTTTATKSSFLIGTLVVITPIFEAILKKRMPGKGNLLGASVVFTGICLIFAGEIGMEGTLTITNGDWITLGGAIFF
SLYIIQMDRVSIQIPIRISVFYQSFVAGFFALISVIILHFVGIEKIRLNPSARLIPGVLYNALLASVLTTFLQTKFQRYV
SPTRVGIIFSLEPVFSSIIAFLLLGEKSGPVRIVGCTIVFLGLILAESIGKDQNLSMENTN

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33256; Mature: 33256

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHIRHEIYLILCTLIWGGTFTMTIFGLRDTSPSIFLGLRFGIASMIFLPFAWKEFRKGK
CCEEHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
IWYPGAFLLGMFLYLGFACETIGLKTTTATKSSFLIGTLVVITPIFEAILKKRMPGKGNL
EECCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LGASVVFTGICLIFAGEIGMEGTLTITNGDWITLGGAIFFSLYIIQMDRVSIQIPIRISV
EHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHEEEECEEEEEEEEHHH
FYQSFVAGFFALISVIILHFVGIEKIRLNPSARLIPGVLYNALLASVLTTFLQTKFQRYV
HHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPTRVGIIFSLEPVFSSIIAFLLLGEKSGPVRIVGCTIVFLGLILAESIGKDQNLSMENT
CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC
N
C
>Mature Secondary Structure
MFHIRHEIYLILCTLIWGGTFTMTIFGLRDTSPSIFLGLRFGIASMIFLPFAWKEFRKGK
CCEEHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
IWYPGAFLLGMFLYLGFACETIGLKTTTATKSSFLIGTLVVITPIFEAILKKRMPGKGNL
EECCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LGASVVFTGICLIFAGEIGMEGTLTITNGDWITLGGAIFFSLYIIQMDRVSIQIPIRISV
EHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEHHHHHHHHHHEEEECEEEEEEEEHHH
FYQSFVAGFFALISVIILHFVGIEKIRLNPSARLIPGVLYNALLASVLTTFLQTKFQRYV
HHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPTRVGIIFSLEPVFSSIIAFLLLGEKSGPVRIVGCTIVFLGLILAESIGKDQNLSMENT
CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]