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The map label for this gene is 45656863

Identifier: 45656863

GI number: 45656863

Start: 1178726

End: 1179907

Strand: Reverse

Name: 45656863

Synonym: LIC10975

Alternate gene names: NA

Gene position: 1179907-1178726 (Counterclockwise)

Preceding gene: 45656865

Following gene: 45656862

Centisome position: 27.59

GC content: 31.3

Gene sequence:

>1182_bases
ATGGATTTTTTTCCGGATCTGAATTTTCTTGATTATTTAATTTTTGTAAAAGAAGTATTAAACCGGTATCTAGAATATCT
TTACTCTGCAAGTATAGTAATTAGTTTTTTAACCGGTCTTTCTGGTTTTTACAAAGCAACCAAAAATCGTTTAAACTTTG
TTCGAGGAATTTTTTTAATGAGCGCTTGCTTTCTAATTATCGGACACAGTAAAGCTTTTTCATTGATGACTTCGGATCCA
AATGGAATTTTAAGTCTCGAAAAGCGTGTCTTTTTTTCCTATTACTACGGATTTGCAGTTTGTGCCTCTTTATCTTCCAC
CTTCTACGTCATGTATCTTTTTGGTGCCTTGAAAAATCCTCTACGTTTGAGCCTATATAGTTTTCTTTCTTTTCCAACAA
TCTTTCTTATTTCTTTAATGATAGAAAACTTAATTTCAATCGTTTACTTTGGAAAGTCAGTTCTTTTTACCTTACAATTC
TCCGCTGGGATTTTTAATCTTTATTATGTTATCAAATATAAAATGAAAAAAATCTATTTCAATTATCCAATTCAAAATTT
TACACTTTGTACAGCGCTTATCGTACATTCGATCGGAATGTGGTTAGGCACTCCAAACTTGATGATTCTTGCACTTTCTT
TTACAGGATTTTTCATTATTTATTTTTTCATATTGGAATACAATCATCCTGAATTTTGGAAAGTGAGTTTTTCCAGCGAA
CTGATAGAAATTAAATCAGAAGATAATAAAATTCAAACTCTACAAACCAATACTAGTCCTAAAAATTTAGTAGAACGTTT
AGACATATCTCGTATCGAAGAAAAAATTCAAAAATTTGTGGAAGATAGAGAATATTTAGACGAAGAAATTCGCTTGTCCG
ATTTTTCAGCTTATATCGGACTTTCACTTCACCAAGCTTCTTATTATTTGAACAATTATAAGGATCTCAGCTTTACAGAT
TTCTTAAGCTTCCATAGACTAGAAGAAGCAAAACGTATGATTGAACAAAGACCAGATATTAATCTTTTAGAAGTGGCTTT
AGCAAGCGGTTTCAATTCTCCTTCTTCTTTTAGAAGAGCTTGTCTAAAATTTACCGGAAAACCTCCAAAAGAATTTAGAA
ACTACGTACTTCATCAAACGACTCCTTCTATTACCTTGGAACTCCAGAACCAATTAGGATAA

Upstream 100 bases:

>100_bases
AGGAAATAAAATATTTATTTTGATCGTCTTGACTTAACAGATAGTTTTTTAAATCTCCAAGTTATCTTAGGTCAAAAGAA
TTGTTAGAGGTGAGAGTAGA

Downstream 100 bases:

>100_bases
TTTTTTCGTTCCATCTAATTTGATTGATGGAACGAATCAATTTAAGTCCCTTACAAATTTTAAATTTAACCTTTCTTTAA
AAATATAGAAATAACTACTT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcription Regulator; Transcriptional Regulator AraC Family; Transcriptional Regulator

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MDFFPDLNFLDYLIFVKEVLNRYLEYLYSASIVISFLTGLSGFYKATKNRLNFVRGIFLMSACFLIIGHSKAFSLMTSDP
NGILSLEKRVFFSYYYGFAVCASLSSTFYVMYLFGALKNPLRLSLYSFLSFPTIFLISLMIENLISIVYFGKSVLFTLQF
SAGIFNLYYVIKYKMKKIYFNYPIQNFTLCTALIVHSIGMWLGTPNLMILALSFTGFFIIYFFILEYNHPEFWKVSFSSE
LIEIKSEDNKIQTLQTNTSPKNLVERLDISRIEEKIQKFVEDREYLDEEIRLSDFSAYIGLSLHQASYYLNNYKDLSFTD
FLSFHRLEEAKRMIEQRPDINLLEVALASGFNSPSSFRRACLKFTGKPPKEFRNYVLHQTTPSITLELQNQLG

Sequences:

>Translated_393_residues
MDFFPDLNFLDYLIFVKEVLNRYLEYLYSASIVISFLTGLSGFYKATKNRLNFVRGIFLMSACFLIIGHSKAFSLMTSDP
NGILSLEKRVFFSYYYGFAVCASLSSTFYVMYLFGALKNPLRLSLYSFLSFPTIFLISLMIENLISIVYFGKSVLFTLQF
SAGIFNLYYVIKYKMKKIYFNYPIQNFTLCTALIVHSIGMWLGTPNLMILALSFTGFFIIYFFILEYNHPEFWKVSFSSE
LIEIKSEDNKIQTLQTNTSPKNLVERLDISRIEEKIQKFVEDREYLDEEIRLSDFSAYIGLSLHQASYYLNNYKDLSFTD
FLSFHRLEEAKRMIEQRPDINLLEVALASGFNSPSSFRRACLKFTGKPPKEFRNYVLHQTTPSITLELQNQLG
>Mature_393_residues
MDFFPDLNFLDYLIFVKEVLNRYLEYLYSASIVISFLTGLSGFYKATKNRLNFVRGIFLMSACFLIIGHSKAFSLMTSDP
NGILSLEKRVFFSYYYGFAVCASLSSTFYVMYLFGALKNPLRLSLYSFLSFPTIFLISLMIENLISIVYFGKSVLFTLQF
SAGIFNLYYVIKYKMKKIYFNYPIQNFTLCTALIVHSIGMWLGTPNLMILALSFTGFFIIYFFILEYNHPEFWKVSFSSE
LIEIKSEDNKIQTLQTNTSPKNLVERLDISRIEEKIQKFVEDREYLDEEIRLSDFSAYIGLSLHQASYYLNNYKDLSFTD
FLSFHRLEEAKRMIEQRPDINLLEVALASGFNSPSSFRRACLKFTGKPPKEFRNYVLHQTTPSITLELQNQLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45795; Mature: 45795

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFFPDLNFLDYLIFVKEVLNRYLEYLYSASIVISFLTGLSGFYKATKNRLNFVRGIFLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SACFLIIGHSKAFSLMTSDPNGILSLEKRVFFSYYYGFAVCASLSSTFYVMYLFGALKNP
HHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LRLSLYSFLSFPTIFLISLMIENLISIVYFGKSVLFTLQFSAGIFNLYYVIKYKMKKIYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHEE
NYPIQNFTLCTALIVHSIGMWLGTPNLMILALSFTGFFIIYFFILEYNHPEFWKVSFSSE
ECCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
LIEIKSEDNKIQTLQTNTSPKNLVERLDISRIEEKIQKFVEDREYLDEEIRLSDFSAYIG
HEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLHQASYYLNNYKDLSFTDFLSFHRLEEAKRMIEQRPDINLLEVALASGFNSPSSFRRA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
CLKFTGKPPKEFRNYVLHQTTPSITLELQNQLG
HHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MDFFPDLNFLDYLIFVKEVLNRYLEYLYSASIVISFLTGLSGFYKATKNRLNFVRGIFLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SACFLIIGHSKAFSLMTSDPNGILSLEKRVFFSYYYGFAVCASLSSTFYVMYLFGALKNP
HHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LRLSLYSFLSFPTIFLISLMIENLISIVYFGKSVLFTLQFSAGIFNLYYVIKYKMKKIYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHEE
NYPIQNFTLCTALIVHSIGMWLGTPNLMILALSFTGFFIIYFFILEYNHPEFWKVSFSSE
ECCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
LIEIKSEDNKIQTLQTNTSPKNLVERLDISRIEEKIQKFVEDREYLDEEIRLSDFSAYIG
HEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLHQASYYLNNYKDLSFTDFLSFHRLEEAKRMIEQRPDINLLEVALASGFNSPSSFRRA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
CLKFTGKPPKEFRNYVLHQTTPSITLELQNQLG
HHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA