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The map label for this gene is 45656856

Identifier: 45656856

GI number: 45656856

Start: 1166708

End: 1167784

Strand: Reverse

Name: 45656856

Synonym: LIC10968

Alternate gene names: NA

Gene position: 1167784-1166708 (Counterclockwise)

Preceding gene: 45656861

Following gene: 45656854

Centisome position: 27.3

GC content: 37.42

Gene sequence:

>1077_bases
ATGTTCTATAGAATTTTGATTTTCGTTCTAGTATTGGTTTCCTGTTCTCCTGCCTCTATTTATAATCCGAGTATTTTTAT
GAGCCAGGCTTGGATTGAAAACACGATCCTGGACTGTATTCTTAAAGAATGTTATCTTTGTTCTCTCAAAATTACAAACA
AACCTGTTGTTAGTTTGTTTGCCGGTACTGGTGTAGCAGCAAGCGTAGATGGTACCACTTCCACAGCCTCTTTCAAAACT
CCTTTCGGTTTAGAAGTAGATACTTCCGGAAATATCTATGTGAGCGATCAAATAAACAACCTGATTCGTAAAATTGATCC
CTCCGGAAATGTAAAAACTCTTTCTACAAACTTACCTTTACAAGATCCTTCCGGCATCAAGTTCGATCCGCTTACTGGAG
ACAAATACGTTTCCTGCAAAGACAGTAATCAAATTTATAAGATAGATTCTACGGAACAATTTTCCTTATTTGCCGGAAGT
TCTTCCGACTTGAGTGGTCTTCAAAACGGGGATAGACTCAATTCCTTGTTTGACAGTCCTTTTTTTATGGACATCGATCC
AGAAAGAAACTTATACGTGGGAGAGTTAAGCAATCATACGATTCGAAAAATCAATCTCAACTCAGGTACGGTGAGTACTC
TTTCCGGAGGAATTTCTGGTTATTTAGACGGAGATTTAGCTTCAGCTCGTTTTAAATCTCCATTAGGAATTGCTTATAAT
CGTAAAATGAATAGTTTATTGGCTGCAGATATTCAGGATCATAGAATTCGAAAAATAGATCTCAAAAATTCTACCGTATC
CACTCTTTTGGGAAACGGAATCGGAGCAGACGTAGATGGAAATGGAACAAACGCTTCGTTTTTTGGTCCCGCTTTCATTT
CTATAGATAACAGCGGTTATATGTTTGTATCGGACGCTAATTCTAACAGAATCCGCATTGTGGATCCTTTACTTAACGTT
TCTACAATTGATCATACGTTTATGGAGATAGGGACAGTTAAAGTTGATTGTTTGAACCAAAGATTGTTAGTCGCCGATTC
TCGTGCAAATCAGATTTTCCAAGTTAAATTTGAATGA

Upstream 100 bases:

>100_bases
TCATATAATCCTGAGTAATAGATACAACTTCTATATTTTCATAAAAGTCCACTGTAGTTTTCTAAAAAAAAATTCATTCT
AATTCTTATAGAAAGTAATT

Downstream 100 bases:

>100_bases
TTTTTCTTTTTTGCTTTTATTCTGGATACTCAAACGTCCCGTCCCACCTCCATCGTTATAAATTGCACTGGAATCAATCA
ATCGGATACTAAAAATTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NHL Repeat Containing Protein; Serine/Threonine Protein Kinase; YD Repeat Protein; Lipoprotein; Serine/Threonine-Protein Kinase; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; Fibronectin Type III Domain Protein; Ascorbate-Dependent Monooxygenase; Redoxin Domain-Containing Protein; Leucine-Rich Repeat-Containing Protein; YD Repeat-Containing Protein; Redoxin Domain Protein; Hemagglutinin/Hemolysin-Related Protein; Redoxin Family; PKD Domain Containing Protein; Copper Amine Oxidase Domain Protein; Immunoglobulin I-Set Domain-Containing Protein; Ig Domain-Containing Protein

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MFYRILIFVLVLVSCSPASIYNPSIFMSQAWIENTILDCILKECYLCSLKITNKPVVSLFAGTGVAASVDGTTSTASFKT
PFGLEVDTSGNIYVSDQINNLIRKIDPSGNVKTLSTNLPLQDPSGIKFDPLTGDKYVSCKDSNQIYKIDSTEQFSLFAGS
SSDLSGLQNGDRLNSLFDSPFFMDIDPERNLYVGELSNHTIRKINLNSGTVSTLSGGISGYLDGDLASARFKSPLGIAYN
RKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGADVDGNGTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLNV
STIDHTFMEIGTVKVDCLNQRLLVADSRANQIFQVKFE

Sequences:

>Translated_358_residues
MFYRILIFVLVLVSCSPASIYNPSIFMSQAWIENTILDCILKECYLCSLKITNKPVVSLFAGTGVAASVDGTTSTASFKT
PFGLEVDTSGNIYVSDQINNLIRKIDPSGNVKTLSTNLPLQDPSGIKFDPLTGDKYVSCKDSNQIYKIDSTEQFSLFAGS
SSDLSGLQNGDRLNSLFDSPFFMDIDPERNLYVGELSNHTIRKINLNSGTVSTLSGGISGYLDGDLASARFKSPLGIAYN
RKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGADVDGNGTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLNV
STIDHTFMEIGTVKVDCLNQRLLVADSRANQIFQVKFE
>Mature_358_residues
MFYRILIFVLVLVSCSPASIYNPSIFMSQAWIENTILDCILKECYLCSLKITNKPVVSLFAGTGVAASVDGTTSTASFKT
PFGLEVDTSGNIYVSDQINNLIRKIDPSGNVKTLSTNLPLQDPSGIKFDPLTGDKYVSCKDSNQIYKIDSTEQFSLFAGS
SSDLSGLQNGDRLNSLFDSPFFMDIDPERNLYVGELSNHTIRKINLNSGTVSTLSGGISGYLDGDLASARFKSPLGIAYN
RKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGADVDGNGTNASFFGPAFISIDNSGYMFVSDANSNRIRIVDPLLNV
STIDHTFMEIGTVKVDCLNQRLLVADSRANQIFQVKFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42476013, Length=292, Percent_Identity=26.7123287671233, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI84993742, Length=284, Percent_Identity=25.3521126760563, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38993; Mature: 38993

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYRILIFVLVLVSCSPASIYNPSIFMSQAWIENTILDCILKECYLCSLKITNKPVVSLF
CHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEE
AGTGVAASVDGTTSTASFKTPFGLEVDTSGNIYVSDQINNLIRKIDPSGNVKTLSTNLPL
ECCCEEEECCCCCCCCCCCCCCCEEEECCCCEEECHHHHHHHHHCCCCCCEEEEEECCCC
QDPSGIKFDPLTGDKYVSCKDSNQIYKIDSTEQFSLFAGSSSDLSGLQNGDRLNSLFDSP
CCCCCCEECCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHCCC
FFMDIDPERNLYVGELSNHTIRKINLNSGTVSTLSGGISGYLDGDLASARFKSPLGIAYN
EEEEECCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCEEECCCHHHHHCCCCCCEEEC
RKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGADVDGNGTNASFFGPAFISIDNSGY
CCHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEECCEEEEECCCCE
MFVSDANSNRIRIVDPLLNVSTIDHTFMEIGTVKVDCLNQRLLVADSRANQIFQVKFE
EEEECCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MFYRILIFVLVLVSCSPASIYNPSIFMSQAWIENTILDCILKECYLCSLKITNKPVVSLF
CHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEE
AGTGVAASVDGTTSTASFKTPFGLEVDTSGNIYVSDQINNLIRKIDPSGNVKTLSTNLPL
ECCCEEEECCCCCCCCCCCCCCCEEEECCCCEEECHHHHHHHHHCCCCCCEEEEEECCCC
QDPSGIKFDPLTGDKYVSCKDSNQIYKIDSTEQFSLFAGSSSDLSGLQNGDRLNSLFDSP
CCCCCCEECCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHCCC
FFMDIDPERNLYVGELSNHTIRKINLNSGTVSTLSGGISGYLDGDLASARFKSPLGIAYN
EEEEECCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCEEECCCHHHHHCCCCCCEEEC
RKMNSLLAADIQDHRIRKIDLKNSTVSTLLGNGIGADVDGNGTNASFFGPAFISIDNSGY
CCHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEECCEEEEECCCCE
MFVSDANSNRIRIVDPLLNVSTIDHTFMEIGTVKVDCLNQRLLVADSRANQIFQVKFE
EEEECCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA