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The map label for this gene is 45656831

Identifier: 45656831

GI number: 45656831

Start: 1135774

End: 1136403

Strand: Reverse

Name: 45656831

Synonym: LIC10943

Alternate gene names: NA

Gene position: 1136403-1135774 (Counterclockwise)

Preceding gene: 45656832

Following gene: 45656830

Centisome position: 26.57

GC content: 40.63

Gene sequence:

>630_bases
ATGGACCAATACGGAAACATTCGCGCGATGGGAATTCATTCCCTACTTTATTGTGAAAGGCTTTTCTATTTAGAAGAGGT
GGAAGGAATTCTAGTTGCGGATGATCGTGTCTATGCAGGACGAACCTTACACGAAGAATTAGAACCTAACGAGGATTTTT
CGGGAAGAATCGAATCCTTTCATTATACTAGTGAAAAATTGGAAGTTTCGGGCAAAGTAGATCGTATTCAAAAACGAGAT
GGGGATTGGATTCCTTACGAGCATAAAAGAGGTCGAGCCAGAATCGGAACAAACGGTCCGGAAGCTTGGGAGTCGGATCA
ATGTCAAGTAACCGTTTATGCCCTTCTACTCGAAGAAGCCACAGGCAGAAATATATCAGAAGGAAAGATCCGATACCACG
GAAGTAAAGATCTTGTAAAAATCGAAATCGACGAAGAACTACGTTCGAAAGCCTTAAAAACAATCGATCGAGCAAAAGAG
TTATCTACGAGCACCAATCGACCACCGGTTGCACAAAACGAAAATTTATGTAAAAATTGTTCTTTAGCTCCGGTTTGTTT
ACCGGAAGAAACAAGAGTTATTACAGAAAATGAATATGAACCGATTCGACTCTTTCCGGAAAAAAGGTAA

Upstream 100 bases:

>100_bases
AGCACGTTCCTTTACCAGTTAGCGAGTTGAGCAAAAGTTAAAACTGGTAAGGAATTCGCCCCAATCTTAACCATCGAACT
CACGTTAAGTTATATCGATT

Downstream 100 bases:

>100_bases
AAGACCACGTTACACGTCTTTGGTCATGATTCAAGAATCAAAAAATCGGACAACGTACTTCTTGTAGAAAAGGTTACGGA
AACAGGAGAAAAGTCTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas1/Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Protein; CRISPR-Associated Exonuclease Cas4 Family Protein; CRISPR-Associated Cas1 Family Protein; Cas4 Family CRISPR-Associated Protein; CRISPR-Associated Exonuclease Cas4/Cas1 Family Protein; CRISPR-Associated ; PE-PGRS Family Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDQYGNIRAMGIHSLLYCERLFYLEEVEGILVADDRVYAGRTLHEELEPNEDFSGRIESFHYTSEKLEVSGKVDRIQKRD
GDWIPYEHKRGRARIGTNGPEAWESDQCQVTVYALLLEEATGRNISEGKIRYHGSKDLVKIEIDEELRSKALKTIDRAKE
LSTSTNRPPVAQNENLCKNCSLAPVCLPEETRVITENEYEPIRLFPEKR

Sequences:

>Translated_209_residues
MDQYGNIRAMGIHSLLYCERLFYLEEVEGILVADDRVYAGRTLHEELEPNEDFSGRIESFHYTSEKLEVSGKVDRIQKRD
GDWIPYEHKRGRARIGTNGPEAWESDQCQVTVYALLLEEATGRNISEGKIRYHGSKDLVKIEIDEELRSKALKTIDRAKE
LSTSTNRPPVAQNENLCKNCSLAPVCLPEETRVITENEYEPIRLFPEKR
>Mature_209_residues
MDQYGNIRAMGIHSLLYCERLFYLEEVEGILVADDRVYAGRTLHEELEPNEDFSGRIESFHYTSEKLEVSGKVDRIQKRD
GDWIPYEHKRGRARIGTNGPEAWESDQCQVTVYALLLEEATGRNISEGKIRYHGSKDLVKIEIDEELRSKALKTIDRAKE
LSTSTNRPPVAQNENLCKNCSLAPVCLPEETRVITENEYEPIRLFPEKR

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24088; Mature: 24088

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQYGNIRAMGIHSLLYCERLFYLEEVEGILVADDRVYAGRTLHEELEPNEDFSGRIESF
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEECCCEECCCCHHHHCCCCCCCCCCCCEE
HYTSEKLEVSGKVDRIQKRDGDWIPYEHKRGRARIGTNGPEAWESDQCQVTVYALLLEEA
EECCCEEEECCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEHHHH
TGRNISEGKIRYHGSKDLVKIEIDEELRSKALKTIDRAKELSTSTNRPPVAQNENLCKNC
CCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCC
SLAPVCLPEETRVITENEYEPIRLFPEKR
CCCEEECCCCCEEEECCCCCCEEECCCCC
>Mature Secondary Structure
MDQYGNIRAMGIHSLLYCERLFYLEEVEGILVADDRVYAGRTLHEELEPNEDFSGRIESF
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEECCCEECCCCHHHHCCCCCCCCCCCCEE
HYTSEKLEVSGKVDRIQKRDGDWIPYEHKRGRARIGTNGPEAWESDQCQVTVYALLLEEA
EECCCEEEECCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEHHHH
TGRNISEGKIRYHGSKDLVKIEIDEELRSKALKTIDRAKELSTSTNRPPVAQNENLCKNC
CCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCC
SLAPVCLPEETRVITENEYEPIRLFPEKR
CCCEEECCCCCEEEECCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA