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The map label for this gene is 45656830

Identifier: 45656830

GI number: 45656830

Start: 1134751

End: 1135605

Strand: Reverse

Name: 45656830

Synonym: LIC10942

Alternate gene names: NA

Gene position: 1135605-1134751 (Counterclockwise)

Preceding gene: 45656831

Following gene: 45656829

Centisome position: 26.55

GC content: 40.0

Gene sequence:

>855_bases
ATGATTAAATTTTTAGTTTCCGAAGAGATTCCAGTGCACTGGTTTTCAGGCGGCGGAAATTACATCGGCGGAATCAATAT
CAATCCTTCCGGAGTTCAAAGAAGAATCAGACAATTCAAAGCTCTCACAAAAGAAACCATTCGATTGAACTTAGCGAAAA
AACTAGTATCCGCAAAATGTGAGTCCCAACTTCGCTACTTACTTCGGGCCACTCGTGGAAAAGACGAAACTAGAAACGAA
ACGGAAAGTTATTTAGCAACAATTAGATCGGGACTTAAAAATATAGAATCGGCGGATTCCCCAAGTCAATTATTAGGGAT
CGAAGGTTCGTCGGCGCGAGCGTATTTTTCCGGACTCCCAGCTTTACTTAAAAATTCAGACCCCTTCTTAGTCCCTAACG
GAAGAAGTAAAAGACCTCCCAAAGATCCTTTTAATGCGACATTAAGTTTTCTTTATTCACTTCTTTACAAGTCGGTTCGC
CAAGCGATCATTGCGGTTGGTCTCGATCCAAGTTTCGGTTTTTATCACACTCCAAGATCTTCCGCCGAACCTCTTGTTTT
AGATTTAATGGAACTTTTCCGTGTAAGTTTATGCGACATGACGCTTATCGGAAGTATCAATCGTAAATCTTGGATCGATG
AAGATTTTGAAATTACAAAAAACAAGGTTTGGTTATCCGAATCGGGTCGTAAAAAAGCTACACAACTGTATGAAACGAGG
TTAGACGATACTTGGAAACATCCTGTTGTTAACTACTCGCTTTCTTATTACCGGATGATTGAGCTTGAAGTAAGACTGTT
AGAAAAAGAATGGAGCGGAGAAGCGAATATATTTGCACAAGCGAGGTTAAGATAA

Upstream 100 bases:

>100_bases
AAAGGTTACGGAAACAGGAGAAAAGTCTAAATCGGAAAAGATTCCGATTCAGGAAATCGAATCCGTAAATATCCATGGAA
ACTGTCAGATATCAAGTCAA

Downstream 100 bases:

>100_bases
TGAAACATTGGAGATTAGTATCTTATGATATTCGAGAACCAAAACGACTTCGGAGAGTTGCCAAAATTATGGAGGGTTTC
GGAGAAAGAATCCAATATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIKFLVSEEIPVHWFSGGGNYIGGININPSGVQRRIRQFKALTKETIRLNLAKKLVSAKCESQLRYLLRATRGKDETRNE
TESYLATIRSGLKNIESADSPSQLLGIEGSSARAYFSGLPALLKNSDPFLVPNGRSKRPPKDPFNATLSFLYSLLYKSVR
QAIIAVGLDPSFGFYHTPRSSAEPLVLDLMELFRVSLCDMTLIGSINRKSWIDEDFEITKNKVWLSESGRKKATQLYETR
LDDTWKHPVVNYSLSYYRMIELEVRLLEKEWSGEANIFAQARLR

Sequences:

>Translated_284_residues
MIKFLVSEEIPVHWFSGGGNYIGGININPSGVQRRIRQFKALTKETIRLNLAKKLVSAKCESQLRYLLRATRGKDETRNE
TESYLATIRSGLKNIESADSPSQLLGIEGSSARAYFSGLPALLKNSDPFLVPNGRSKRPPKDPFNATLSFLYSLLYKSVR
QAIIAVGLDPSFGFYHTPRSSAEPLVLDLMELFRVSLCDMTLIGSINRKSWIDEDFEITKNKVWLSESGRKKATQLYETR
LDDTWKHPVVNYSLSYYRMIELEVRLLEKEWSGEANIFAQARLR
>Mature_284_residues
MIKFLVSEEIPVHWFSGGGNYIGGININPSGVQRRIRQFKALTKETIRLNLAKKLVSAKCESQLRYLLRATRGKDETRNE
TESYLATIRSGLKNIESADSPSQLLGIEGSSARAYFSGLPALLKNSDPFLVPNGRSKRPPKDPFNATLSFLYSLLYKSVR
QAIIAVGLDPSFGFYHTPRSSAEPLVLDLMELFRVSLCDMTLIGSINRKSWIDEDFEITKNKVWLSESGRKKATQLYETR
LDDTWKHPVVNYSLSYYRMIELEVRLLEKEWSGEANIFAQARLR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 32319; Mature: 32319

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFLVSEEIPVHWFSGGGNYIGGININPSGVQRRIRQFKALTKETIRLNLAKKLVSAKC
CEEEEECCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESQLRYLLRATRGKDETRNETESYLATIRSGLKNIESADSPSQLLGIEGSSARAYFSGLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCHHHHHCCH
ALLKNSDPFLVPNGRSKRPPKDPFNATLSFLYSLLYKSVRQAIIAVGLDPSFGFYHTPRS
HHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SAEPLVLDLMELFRVSLCDMTLIGSINRKSWIDEDFEITKNKVWLSESGRKKATQLYETR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHCCCEEEECCCCCHHHHHHHHHH
LDDTWKHPVVNYSLSYYRMIELEVRLLEKEWSGEANIFAQARLR
CCCCCCCCCEEECHHHEEEHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MIKFLVSEEIPVHWFSGGGNYIGGININPSGVQRRIRQFKALTKETIRLNLAKKLVSAKC
CEEEEECCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESQLRYLLRATRGKDETRNETESYLATIRSGLKNIESADSPSQLLGIEGSSARAYFSGLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCHHHHHCCH
ALLKNSDPFLVPNGRSKRPPKDPFNATLSFLYSLLYKSVRQAIIAVGLDPSFGFYHTPRS
HHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SAEPLVLDLMELFRVSLCDMTLIGSINRKSWIDEDFEITKNKVWLSESGRKKATQLYETR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHCCCEEEECCCCCHHHHHHHHHH
LDDTWKHPVVNYSLSYYRMIELEVRLLEKEWSGEANIFAQARLR
CCCCCCCCCEEECHHHEEEHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]